Publications by Computational Biology and Bioinformatics

Penn, M. et al. (2024) “Phylo2Vec: a vector representation for binary trees”, Systematic Biology, 74(2), pp. 250–266.

Lu, Y., Reinert, G. and Cucuringu, M. (2024) “Trade co-occurrence, trade flow decomposition, and conditional order imbalance in equity markets”, Quantitative Finance, 24(6), pp. 779–809.

Armbruster, S. and Reinert, G. (2024) “Network-based time series modeling for COVID-19 incidence in the Republic of Ireland”, Applied Network Science, 9(1).

Hayes, S. et al. (2024) “Modelling hepatitis C infection acquired from blood transfusions in the UK between 1970 and 1991 for the Infected Blood Inquiry”, Royal Society Open Science, 11(6).

Gordon, G. et al. (2024) “Prospects for the computational humanization of antibodies and nanobodies”, Frontiers in Immunology, 15.

Mendes, C. et al. (2024) “CamTrapAsia: a dataset of tropical forest vertebrate communities from 239 camera trapping studies”, Ecology, 105(6).

Reinert, G. and Xu, W. (2024) “SteinGen: Generating Fidelitous and Diverse Graph Samples.”

Hampshire, A. et al. (2024) “Cognition and Memory after Covid-19 in a Large Community Sample”, New England Journal of Medicine, 390(9), pp. 806–818.

Theorell, J. et al. (2024) “Ultrahigh frequencies of peripherally matured LGI1- and CASPR2-reactive B cells characterize the cerebrospinal fluid in autoimmune encephalitis”, Proceedings of the National Academy of Sciences, 121(7).

Rivera, L. et al. (2024) “Clinical and epidemiological characteristics of Madariaga and Venezuelan equine encephalitis virus infections”, p. 2024.02.02.24302220.