Publications by Computational Biology and Bioinformatics

Quast, N., Deane, C. and Raybould, M. (2025) “STCRpy: a software suite for T cell receptor structure parsing, interaction profiling and machine learning dataset preparation.”, Bioinformatics (Oxford, England). Edited by J. Cheng, p. btaf566.

Aminian, G. et al. (2025) “Generalization and robustness of the tilted empirical risk”, in Proceedings of the 42nd International Conference on Machine Learning. PMLR, pp. 1419–1461.

Capel, H. et al. (2025) “Pox-AbDab: the Orthopoxvirus Antibody Database”, bioRxiv.

Ignatieva, A. et al. (2025) “The length of haplotype blocks and signals of structural variation in reconstructed genealogies”, Molecular Biology and Evolution, p. msaf190.

Temcinas, T., Nanda, V. and Reinert, G. (2025) “Goodness-of-fit via count statistics in dense random simplicial complexes”, Foundations of Data Science [Preprint].

Fatima, A. and Reinert, G. (2025) “Stein’s method for distributions modelling competing and complementary risk problems”, Advances in Applied Probability [Preprint].

Reinert, G., Hung, E. and Mantziou, A. (2025) “A Bayesian mixture model for Poisson network autoregression”, Social Network Analysis and Mining [Preprint].

Adams, J. et al. (2025) “Individualised Counterfactual Examples Using Conformal Prediction Intervals.”

Fatima, A. and Reinert, G. (2025) “A Kernelised Stein Discrepancy for Assessing the Fit of Inhomogeneous Random Graph Models.”

Ren, K., Trauthwein, T. and Reinert, G. (2025) “Triadic structures in multislice networks.”