Publications by Computational Biology and Bioinformatics

Lu, Y., Reinert, G. and Cucuringu, M. (2024) “Trade co-occurrence, trade flow decomposition, and conditional order imbalance in equity markets”, Quantitative Finance, 24(6), pp. 779–809.

Armbruster, S. and Reinert, G. (2024) “Network-based time series modeling for COVID-19 incidence in the Republic of Ireland”, Applied Network Science, 9(1).

Jiang, Y. et al. (2024) “Comprehensive Overview of Bottom-Up Proteomics Using Mass Spectrometry”, ACS Measurement Science Au, 4(4), pp. 338–417.

Sanchez-Garcia, R. et al. (2024) “CESPED: A benchmark for supervised particle pose estimation in cryo-EM”, Physical Review Research, 6(2), p. 023245.

Gordon, G. et al. (2024) “Prospects for the computational humanization of antibodies and nanobodies”, Frontiers in Immunology, 15.

Sanchez-Garcia, R. et al. (2024) “Cryo-EM Map Anisotropy Can Be Attenuated by Map Post-Processing and a New Method for Its Estimation”, International Journal of Molecular Sciences, 25(7), pp. 3959–3959.

Reinert, G. and Xu, W. (2024) “SteinGen: Generating Fidelitous and Diverse Graph Samples.”

Crook, O. et al. (2024) “A linear transportation L p distance for pattern recognition”, Pattern Recognition, 147(SIAM J. Math. Anal. 49 2 2017), p. 110080.

Theorell, J. et al. (2024) “Ultrahigh frequencies of peripherally matured LGI1- and CASPR2-reactive B cells characterize the cerebrospinal fluid in autoimmune encephalitis”, Proceedings of the National Academy of Sciences, 121(7).

Ouyang, R. et al. (2024) “L2G2G: a Scalable Local-to-Global Network Embedding with Graph Autoencoders”, arXiv.