Publications (Computational Biology and Bioinformatics) | Department of Statistics

Publications by Computational Biology and Bioinformatics

Ellmen, I. et al. (2025) “Transformers trained on proteins can learn to attend to Euclidean distance”, Transactions on Machine Learning Research, July-2025.

Ellmen, I., Raybould, M. and Deane, C. (2025) “The protein universe in 3D”, Nature Chemical Biology, 21(1), pp. 27–28.

Adams, J. et al. (2025) “Individualised Counterfactual Examples Using Conformal Prediction Intervals”, in Proceedings of Machine Learning Research, pp. 425–444.

Mills, C. and Donnelly, C. (2024) “Climate-based modelling and forecasting of dengue fever in three endemic departments of Peru”, PLoS Neglected Tropical Diseases, 18(12).

Dablander, M. et al. (2024) “Sort & Slice: a simple and superior alternative to hash-based folding for extended-connectivity fingerprints”, Journal of Cheminformatics, 16(1).

Dablander, M. et al. (2024) “Sort & Slice: a simple and superior alternative to hash-based folding for extended-connectivity fingerprints”, Journal of Cheminformatics, 16(1), pp. 1–20.

Dablander, M. et al. (2024) “Sort & Slice: a simple and superior alternative to hash-based folding for extended-connectivity fingerprints.”, J. Cheminformatics, 16, pp. 135–135.

Avalos-Pacheco, A. et al. (2024) “An almost infinite sites model”, Theoretical Population Biology, 160, pp. 49–61.

Hung, E., Mantziou, A. and Reinert, G. (2024) “A Bayesian mixture model for Poisson network autoregression.”

Scheidwasser, N. et al. (2024) “Deep learning from videography as a tool for measuring E. coli infection in poultry”, bioRxiv.