Publications by Computational Biology and Bioinformatics

Pardo-Diaz, J. et al. (2021) “Generating weighted and thresholded gene coexpression networks using signed distance correlation”, bioRxiv.

Kaur, S. et al. (2021) “Local methods to improve cryo-electron microcopy maps”, in Optics InfoBase Conference Papers.

Payne, A. et al. (2021) “Burns Management at A UK Major Trauma Centre During The COVID-19 Lockdown”, in BRITISH JOURNAL OF SURGERY.

Galson, J. et al. (2020) “Deep sequencing of B cell receptor repertoires from COVID-19 patients reveals strong convergent immune signatures”, Frontiers in Immunology, 11.

Crook, O. et al. (2020) “Moving Profiling Spatial Proteomics Beyond Discrete Classification”, Proteomics, 20(23), p. e1900392.

Shin, J. et al. (2020) “Spatial proteomics defines the content of trafficking vesicles captured by golgin tethers”, Nature Communications, 11(1), p. 5987.

Crook, O. et al. (2020) “A semi-supervised Bayesian approach for simultaneous protein sub-cellular localisation assignment and novelty detection”, PLOS Computational Biology, 16(11), p. e1008288.

Klimm, F. et al. (2020) “Functional module detection through integration of single-cell RNA sequencing data with protein–protein interaction networks”, BMC Genomics, 21(1).

Barylyuk, K. et al. (2020) “A Comprehensive Subcellular Atlas of the Toxoplasma Proteome via hyperLOPIT Provides Spatial Context for Protein Functions”, Cell Host & Microbe, 28(5), pp. 752 – 766.e9.

Melero, R. et al. (2020) “Continuous flexibility analysis of SARS-CoV-2 spike prefusion structures”, IUCrJ, 7(Pt 6), pp. 1059–1069.