* using log directory ‘/data/gannet/ripley/R/packages/tests-Suggests/zoomerjoin.Rcheck’
* using R Under development (unstable) (2026-01-15 r89304)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
    GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
* running under: Fedora Linux 42 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘zoomerjoin/DESCRIPTION’ ... OK
* this is package ‘zoomerjoin’ version ‘0.2.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... INFO
Package suggested but not available for checking: ‘fuzzyjoin’
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘zoomerjoin’ can be installed ... [189s/87s] OK
* used C compiler: ‘gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)’
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [11s/17s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in shell scripts ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking Rust compilation ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... ERROR
Running examples in ‘zoomerjoin-Ex.R’ failed
The error most likely occurred in:

> ### Name: hamming_inner_join
> ### Title: Fuzzy joins for Hamming distance using Locality Sensitive
> ###   Hashing
> ### Aliases: hamming_inner_join hamming_anti_join hamming_left_join
> ###   hamming_right_join hamming_full_join
> 
> ### ** Examples
> 
> # load baby names data
> # install.packages("babynames")
> library(babynames)
Error in library(babynames) : there is no package called ‘babynames’
Execution halted
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’ [22s/34s]
 [23s/35s] ERROR
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # This file is part of the standard setup for testthat.
  > # It is recommended that you do not modify it.
  > #
  > # Where should you do additional test configuration?
  > # Learn more about the roles of various files in:
  > # * https://r-pkgs.org/tests.html
  > # * https://testthat.r-lib.org/reference/test_package.html#special-files
  > 
  > library(testthat)
  > library(zoomerjoin)
  _R_CHECK_LIMIT_CORES_ is set to TRUE. Running on 2 cores
  > 
  > test_check("zoomerjoin")
  Loading required package: babynames
  Loading required package: stringdist
  Saving _problems/test-hamming_dist-6.R
  Loading required package: babynames
  Loading required package: stringdist
  Saving _problems/test-test_jaccard_sim-6.R
  Saving _problems/test-test_logical_lsh_join-39.R
  [ FAIL 3 | WARN 7 | SKIP 3 | PASS 79 ]
  
  ══ Skipped tests (3) ═══════════════════════════════════════════════════════════
  • {igraph} is not installed (1): 'test-test_string_group.R:2:3'
  • {vdiffr} is not installed (2): 'test-curves.R:2:3', 'test-curves.R:18:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-hamming_dist.R:6:5'): hamming distance works ───────────────────
  Error in `eval(code, test_env)`: object 'babynames' not found
  Backtrace:
      ▆
   1. ├─base::tolower(unique(babynames$name)) at test-hamming_dist.R:6:5
   2. └─base::unique(babynames$name)
  ── Error ('test-test_jaccard_sim.R:6:5'): jaccard sim works ────────────────────
  Error in `eval(code, test_env)`: object 'babynames' not found
  Backtrace:
      ▆
   1. ├─base::tolower(unique(babynames$name)) at test-test_jaccard_sim.R:6:5
   2. └─base::unique(babynames$name)
  ── Error ('test-test_logical_lsh_join.R:34:1'): (code run outside of `test_that()`) ──
  Error: object 'babynames' not found
  Backtrace:
      ▆
   1. ├─... %>% filter(row_number() < 500) at test-test_logical_lsh_join.R:34:1
   2. ├─dplyr::filter(., row_number() < 500)
   3. ├─dplyr::filter(., nchar(name) > 9)
   4. ├─tibble::tibble(name = tolower(unique(babynames$name)), id_1 = 1:n_distinct(babynames$name))
   5. │ └─tibble:::tibble_quos(xs, .rows, .name_repair)
   6. │   └─rlang::eval_tidy(xs[[j]], mask)
   7. ├─base::tolower(unique(babynames$name))
   8. └─base::unique(babynames$name)
  
  [ FAIL 3 | WARN 7 | SKIP 3 | PASS 79 ]
  Deleting unused snapshots: 'curves/basic-euclidean-curve.svg' and
  'curves/basic-jaccard-curve.svg'
  Error:
  ! Test failures.
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... [7s/13s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 2 ERRORs
See
  ‘/data/gannet/ripley/R/packages/tests-Suggests/zoomerjoin.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 4:06.21, 267.17 + 23.38