* using log directory ‘/data/gannet/ripley/R/packages/tests-Suggests/dlookr.Rcheck’ * using R Under development (unstable) (2023-07-01 r84626) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-13 (GCC) 13.1.0 GNU Fortran (GCC) 13.1.0 * running under: Fedora Linux 36 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘dlookr/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘dlookr’ version ‘0.6.2’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘dlookr’ can be installed ... [30s/32s] OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [37s/37s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking re-building of vignette outputs ... [22s/24s] ERROR Error(s) in re-building vignettes: --- re-building ‘EDA.Rmd’ using rmarkdown Quitting from lines 53-55 [import_data] (EDA.Rmd) Error: processing vignette 'EDA.Rmd' failed with diagnostics: there is no package called 'ISLR' --- failed re-building ‘EDA.Rmd’ --- re-building ‘diagonosis.Rmd’ using rmarkdown --- finished re-building ‘diagonosis.Rmd’ --- re-building ‘introduce.Rmd’ using rmarkdown --- finished re-building ‘introduce.Rmd’ --- re-building ‘transformation.Rmd’ using rmarkdown Quitting from lines 45-47 [import_data] (transformation.Rmd) Error: processing vignette 'transformation.Rmd' failed with diagnostics: there is no package called 'ISLR' --- failed re-building ‘transformation.Rmd’ SUMMARY: processing the following files failed: ‘EDA.Rmd’ ‘transformation.Rmd’ Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR See ‘/data/gannet/ripley/R/packages/tests-Suggests/dlookr.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 3:44.72, 192.70 + 15.57