* using log directory ‘/data/gannet/ripley/R/packages/tests-Suggests/VARSEDIG.Rcheck’ * using R Under development (unstable) (2022-04-15 r82188) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘VARSEDIG/DESCRIPTION’ ... OK * this is package ‘VARSEDIG’ version ‘2.1’ * package encoding: latin1 * checking package namespace information ... OK * checking package dependencies ... NOTE Packages suggested but not available for checking: 'kulife', 'REdaS' * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘VARSEDIG’ can be installed ... [8s/21s] OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [16s/42s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... NOTE Unknown packages ‘kulife’, ‘REdaS’ in Rd xrefs * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... ERROR Running examples in ‘VARSEDIG-Ex.R’ failed The error most likely occurred in: > ### Name: VARSEDIG > ### Title: Variable selection to discriminate among taxonomic groups > ### Aliases: VARSEDIG > ### Keywords: VARSEDIG > > ### ** Examples > > > > data(characiformes) > > VARSEDIG(data = characiformes , variables = c("M2","M3","M4","M5","M6","M7","M8","M9","M10", + "M11","M12","M13","M14","M15","M16","M17","M18","M19","M20","M21","M22","M23", + "M24","M25","M26","M27","M28"), group="Species" , group1= "Moenkhausia oligolepis", + group2="Moenkhausia dichroura", LEGENDd=c("x='topright'", "legend = dati", + "col = COLORB", "lty=lty", "bty='n'", "cex=1.2", "text.font= 3"), + LEGENDs=c("x='topright'", "legend=unique(datosF[,'Group'])", "col = color1", + "pch = pcht", "bty='n'", "cex=1.2", "text.font=3"), LEGENDr=c("x='topright'", + "legend = dati", "col=col", "pch= c(16,16)", "bty='n'", "cex=1.2", "text.font=3"), + XLIMs=c(-1.2,1.2), YLIMs=c(-1.3,1.3), BIVTEST12=c("br=br", "cex=1.1", + "col=colbiv", "sub=sub", "Pcol=Pcol"), BIVTEST21=c("br=br", "cex=1.1", + "col=colbiv", "sub=sub", "Pcol=Pcol"), colbiv="blue", ellipse=TRUE, convex=FALSE, removefiles=TRUE) Error in loadNamespace(x) : there is no package called ‘kulife’ Calls: VARSEDIG ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart Execution halted * checking PDF version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 2 NOTEs See ‘/data/gannet/ripley/R/packages/tests-Suggests/VARSEDIG.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 3:17.95, 67.07 + 7.20