* using log directory ‘/data/gannet/ripley/R/packages/tests-Suggests/MANOVA.RM.Rcheck’ * using R Under development (unstable) (2023-03-29 r84112) * using platform: x86_64-pc-linux-gnu (64-bit) * R was compiled by gcc (GCC) 12.2.1 20221121 (Red Hat 12.2.1-4) GNU Fortran (GCC) 12.2.1 20221121 (Red Hat 12.2.1-4) * running under: Fedora Linux 36 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘MANOVA.RM/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘MANOVA.RM’ version ‘0.5.3’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... NOTE Package suggested but not available for checking: ‘RGtk2’ * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘MANOVA.RM’ can be installed ... [17s/42s] OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [30s/81s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... ERROR Running examples in ‘MANOVA.RM-Ex.R’ failed The error most likely occurred in: > ### Name: EEG > ### Title: EEG Measurements in Patients with Alzheimer's Disease (long > ### format) > ### Aliases: EEG > ### Keywords: datasets > > ### ** Examples > > library(ggplot2) Error in library(ggplot2) : there is no package called ‘ggplot2’ Execution halted * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ [20s/45s] [21s/47s] ERROR Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(MANOVA.RM) > > test_check("MANOVA.RM") [ FAIL 3 | WARN 0 | SKIP 0 | PASS 23 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test_MANOVA.R:33:3'): example 4: nested design ────────────────────── Error in `library(GFD)`: there is no package called 'GFD' Backtrace: ▆ 1. └─base::library(GFD) at test_MANOVA.R:33:2 ── Error ('test_RM.R:46:3'): correct mean calculation ────────────────────────── Error in `library(GFD)`: there is no package called 'GFD' Backtrace: ▆ 1. └─base::library(GFD) at test_RM.R:46:2 ── Error ('test_simCI.R:27:3'): nested design ────────────────────────────────── Error in `library(GFD)`: there is no package called 'GFD' Backtrace: ▆ 1. └─base::library(GFD) at test_simCI.R:27:2 [ FAIL 3 | WARN 0 | SKIP 0 | PASS 23 ] Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking re-building of vignette outputs ... [120s/152s] OK * checking PDF version of manual ... OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 ERRORs, 1 NOTE See ‘/data/gannet/ripley/R/packages/tests-Suggests/MANOVA.RM.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 8:36.00, 253.89 + 15.01