* using log directory ‘/data/gannet/ripley/R/packages/tests-Suggests/DGCA.Rcheck’
* using R Under development (unstable) (2024-04-19 r86451)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc-13 (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Fedora Linux 36 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘DGCA/DESCRIPTION’ ... OK
* this is package ‘DGCA’ version ‘1.0.3’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘DGCA’ can be installed ... [42s/51s] OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [13s/16s] OK
* checking whether the package can be loaded with stated dependencies ... [12s/14s] OK
* checking whether the package can be unloaded cleanly ... [12s/15s] OK
* checking whether the namespace can be loaded with stated dependencies ... [13s/16s] OK
* checking whether the namespace can be unloaded cleanly ... [12s/16s] OK
* checking loading without being on the library search path ... [12s/15s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [63s/89s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [20s/29s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’ [15s/19s]
 [15s/19s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [19s/26s] ERROR
Error(s) in re-building vignettes:
--- re-building ‘DGCA_basic.Rmd’ using rmarkdown
** Processing: /data/gannet/ripley/R/packages/tests-Suggests/DGCA.Rcheck/vign_test/DGCA/vignettes/DGCA_basic_files/figure-html/unnamed-chunk-4-1.png
720x384 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31706 bytes
Input file size = 31820 bytes

Trying:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 26139
  zc = 9  zm = 8  zs = 1  f = 0
  zc = 1  zm = 8  zs = 2  f = 0
  zc = 9  zm = 8  zs = 3  f = 0
  zc = 9  zm = 8  zs = 0  f = 5
  zc = 9  zm = 8  zs = 1  f = 5
  zc = 1  zm = 8  zs = 2  f = 5
  zc = 9  zm = 8  zs = 3  f = 5
                               
Selecting parameters:
  zc = 9  zm = 8  zs = 0  f = 0		IDAT size = 26139

Output IDAT size = 26139 bytes (5567 bytes decrease)
Output file size = 26217 bytes (5603 bytes = 17.61% decrease)


Quitting from lines  at lines 72-74 [unnamed-chunk-5] (DGCA_basic.Rmd)
Error: processing vignette 'DGCA_basic.Rmd' failed with diagnostics:
The R package cowplot is needed for this function to work. Please install it.
--- failed re-building ‘DGCA_basic.Rmd’

SUMMARY: processing the following file failed:
  ‘DGCA_basic.Rmd’

Error: Vignette re-building failed.
Execution halted

* checking PDF version of manual ... [9s/14s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/gannet/ripley/R/packages/tests-Suggests/DGCA.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 9:15.44, 367.06 + 38.04