* using log directory ‘/data/gannet/ripley/R/packages/tests-Suggests/BayesMassBal.Rcheck’
* using R Under development (unstable) (2024-08-23 r87043)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc-14 (GCC) 14.2.0
    GNU Fortran (GCC) 14.2.0
* running under: Fedora Linux 36 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘BayesMassBal/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘BayesMassBal’ version ‘1.1.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘BayesMassBal’ can be installed ... [14s/19s] OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [23s/29s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [9s/14s] ERROR
Running examples in ‘BayesMassBal-Ex.R’ failed
The error most likely occurred in:

> ### Name: mainEff
> ### Title: Main Effects
> ### Aliases: mainEff
> 
> ### ** Examples
> 
> 
> ## Importing Data, generating BMB object
> y <- importObservations(file = system.file("extdata", "twonode_example.csv",
+                                     package = "BayesMassBal"),
+                    header = TRUE, csv.params = list(sep = ";"))
> 
> C <- matrix(c(1,-1,0,-1,0,0,1,-1,0,-1), byrow = TRUE, ncol = 5, nrow = 2)
> X <- constrainProcess(C = C)
> 
> BMB_example <- BMB(X = X, y = y, cov.structure = "indep",
+                    BTE = c(10,200,1), lml = FALSE, verb=0)
> 
> fn_example <- function(X,ybal){
+     cu.frac <- 63.546/183.5
+     feed.mass <- ybal$CuFeS2[1] + ybal$gangue[1]
+     ## Concentrate mass per ton feed
+     con.mass <- (ybal$CuFeS2[3] + ybal$gangue[3])/feed.mass
+     ## Copper mass per ton feed
+     cu.mass <- (ybal$CuFeS2[3]*cu.frac)/feed.mass
+     gam <- c(-1,-1/feed.mass,cu.mass,-con.mass,-cu.mass,-con.mass)
+     f <- X %*% gam
+     return(f)
+     }
> 
> rangex <- matrix(c(4.00 ,6.25,1125,1875,3880,9080,20,60,96,208,20.0,62.5),
+                   ncol = 6, nrow = 2)
> 
> mE_example <- mainEff(BMB_example, fn = "fn_example",rangex =  rangex,xj = 3, N = 15, res = 4)
Warning in mainEff(BMB_example, fn = "fn_example", rangex = rangex, xj = 3,  :
  The tgp package is required
Error in LHS(res, r.x) : could not find function "LHS"
Calls: mainEff
Execution halted
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘spelling.R’
  Running ‘testthat.R’
 [7s/10s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... [8s/11s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/gannet/ripley/R/packages/tests-Suggests/BayesMassBal.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 2:48.30, 113.09 + 13.29