* using log directory ‘/data/gannet/ripley/R/packages/tests-noLD/tidyILD.Rcheck’
* using R Under development (unstable) (2026-04-17 r89912)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)
    GNU Fortran (GCC) 15.2.1 20260123 (Red Hat 15.2.1-7)
* running under: Fedora Linux 42 (Workstation Edition)
* using session charset: UTF-8
* current time: 2026-04-18 07:12:55 UTC
* using option ‘--no-stop-on-test-error’
* checking for file ‘tidyILD/DESCRIPTION’ ... OK
* this is package ‘tidyILD’ version ‘0.4.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘tidyILD’ can be installed ... [40s/112s] OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [7s/18s] OK
* checking whether the package can be loaded with stated dependencies ... [5s/13s] OK
* checking whether the package can be unloaded cleanly ... [5s/12s] OK
* checking whether the namespace can be loaded with stated dependencies ... [5s/16s] OK
* checking whether the namespace can be unloaded cleanly ... [7s/20s] OK
* checking loading without being on the library search path ... [7s/15s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [72s/136s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [32s/82s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’ [145s/336s]
 [146s/337s] ERROR
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(tidyILD)
  > test_check("tidyILD")
  Saving _problems/test-contract-regression-12.R
  starting worker pid=1569990 on localhost:11229 at 08:25:40.365
  starting worker pid=1569991 on localhost:11229 at 08:25:43.827
  Loading required package: data.table
  Loading required package: data.table
  
  Attaching package: ‘data.table’
  
  The following object is masked from ‘package:base’:
  
      %notin%
  
  
  Attaching package: ‘data.table’
  
  The following object is masked from ‘package:base’:
  
      %notin%
  
  Saving _problems/test-heterogeneity-lmer-23.R
  starting worker pid=1583970 on localhost:11693 at 08:26:48.923
  starting worker pid=1583971 on localhost:11693 at 08:26:51.275
  Loading required package: data.table
  Loading required package: data.table
  
  Attaching package: ‘data.table’
  
  
  Attaching package: ‘data.table’
  
  The following object is masked from ‘package:base’:
  
      %notin%
  
  The following object is masked from ‘package:base’:
  
      %notin%
  
  ILD provenance (tidyILD 0.4.0)
    1. ild_prepare @ 2026-04-18T08:29:19
        args: id, time, gap_threshold, duplicate_handling
        outputs: n_id, n_obs, spacing_class, source_was_tsibble, tsibble_interval_declared
    2. ild_center @ 2026-04-18T08:29:19
        args: vars, type, naming
        outputs: created
  [ FAIL 2 | WARN 134 | SKIP 20 | PASS 890 ]
  
  ══ Skipped tests (20) ══════════════════════════════════════════════════════════
  • GR_KFAS_STATE_DIMENSION_HIGH_FOR_N requires m_state >= 2; v1 local_level is
    scalar state (1): 'test-kfas-extended.R:144:3'
  • On CRAN (16): 'test-contract-regression.R:64:3',
    'test-heterogeneity-brms.R:3:3', 'test-ild-msm-recovery.R:39:3',
    'test-ild_autoplot_bundle.R:65:3', 'test-ild_brms.R:3:3',
    'test-ild_brms.R:26:3', 'test-ild_brms.R:49:3', 'test-ild_brms.R:68:3',
    'test-ild_fit.R:3:3', 'test-ild_manifest.R:56:3', 'test-ild_power.R:2:3',
    'test-ild_power.R:23:3', 'test-ild_power.R:39:3', 'test-ild_power.R:53:3',
    'test-ild_power.R:90:3', 'test-ild_power.R:108:3'
  • ar1_state not implemented in ild_kfas(); see inst/dev/KFAS_V1_BACKEND.md (1):
    'test-kfas-extended.R:127:3'
  • local_trend not implemented in ild_kfas(); see inst/dev/KFAS_V1_BACKEND.md
    (1): 'test-kfas-extended.R:118:3'
  • regression_local_level not implemented in ild_kfas(); see
    inst/dev/KFAS_V1_BACKEND.md (1): 'test-kfas-extended.R:136:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Failure ('test-contract-regression.R:12:3'): contract: regular spacing + decomposed predictors — dense bundle, tidy/augment, plots, no guardrail methods ──
  Expected `grepl("Methodological cautions (tidyILD guardrails)", m, fixed = TRUE)` to be FALSE.
  Differences:
  `actual`:   TRUE 
  `expected`: FALSE
  
  ── Error ('test-heterogeneity-lmer.R:20:3'): ild_heterogeneity lmer random slope ──
  <Rcpp::exception/C++Error/error/condition>
  Error: Downdated VtV is not positive definite
  Backtrace:
       ▆
    1. ├─base::suppressWarnings(...) at test-heterogeneity-lmer.R:20:3
    2. │ └─base::withCallingHandlers(...)
    3. └─tidyILD::ild_lme(...)
    4.   └─lme4::lmer(formula, data = data, ...)
    5.     └─lme4::optimizeLmer(...)
    6.       └─lme4:::optwrap(...)
    7.         ├─base::withCallingHandlers(...)
    8.         ├─base::do.call(optfun, arglist)
    9.         └─minqa (local) `<fn>`(...)
   10.           └─minqa (local) `<fn>`(`<dbl>`)
   11.             └─lme4 (local) fn(x, ...)
  
  [ FAIL 2 | WARN 134 | SKIP 20 | PASS 890 ]
  Error:
  ! Test failures.
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [231s/416s] OK
* checking PDF version of manual ... [18s/28s] OK
* checking HTML version of manual ... [16s/25s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/gannet/ripley/R/packages/tests-noLD/tidyILD.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 24:40.65, 649.23 + 49.03