* using log directory ‘/data/gannet/ripley/R/packages/tests-noLD/subtee.Rcheck’ * using R Under development (unstable) (2024-01-15 r85806) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-13 (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Fedora Linux 36 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘subtee/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘subtee’ version ‘1.0.1’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘subtee’ can be installed ... [16s/20s] OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [26s/33s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [5s/15s] ERROR Running examples in ‘subtee-Ex.R’ failed The error most likely occurred in: > ### Name: get_prca_data > ### Title: Downloads the prca dataset to use in the package's examples > ### (Internet connection is required). > ### Aliases: get_prca_data > > ### ** Examples > > prca = get_prca_data() Error in curl::curl_fetch_memory(url, handle = handle) : Timeout was reached: [www.uniklinik-freiburg.de] Connection timeout after 10000 ms Calls: get_prca_data ... request_fetch -> request_fetch.write_memory -> Execution halted * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘data-sets.R’ Running ‘testthat.R’ [82s/148s] [83s/149s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [98s/241s] OK * checking PDF version of manual ... [10s/26s] OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR See ‘/data/gannet/ripley/R/packages/tests-noLD/subtee.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 10:04.95, 293.31 + 21.69