* using log directory ‘/data/gannet/ripley/R/packages/tests-noLD/rAltmetric.Rcheck’ * using R Under development (unstable) (2022-05-30 r82425) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘rAltmetric/DESCRIPTION’ ... OK * this is package ‘rAltmetric’ version ‘0.7.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘rAltmetric’ can be installed ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [4s/11s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking LazyData ... NOTE 'LazyData' is specified without a 'data' directory * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ ERROR Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(rAltmetric) > > test_check("rAltmetric") [ FAIL 1 | WARN 1 | SKIP 0 | PASS 2 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error (tests.R:4:3): str_length is number of characters ───────────────────── Error: lexical error: invalid char in json text. The API key you supplied was no (right here) ------^ Backtrace: ▆ 1. └─rAltmetric::altmetrics(doi = "10.1038/480426a") at tests.R:4:2 2. └─jsonlite::fromJSON(httr::content(request, as = "text"), flatten = TRUE) 3. └─jsonlite:::parse_and_simplify(...) 4. └─jsonlite:::parseJSON(txt, bigint_as_char) 5. └─jsonlite:::parse_string(txt, bigint_as_char) [ FAIL 1 | WARN 1 | SKIP 0 | PASS 2 ] Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking re-building of vignette outputs ... ERROR Error(s) in re-building vignettes: --- re-building ‘intro-to-altmetric.Rmd’ using rmarkdown Quitting from lines 24-40 (intro-to-altmetric.Rmd) Error: processing vignette 'intro-to-altmetric.Rmd' failed with diagnostics: lexical error: invalid char in json text. The API key you supplied was no (right here) ------^ --- failed re-building ‘intro-to-altmetric.Rmd’ SUMMARY: processing the following file failed: ‘intro-to-altmetric.Rmd’ Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 ERRORs, 1 NOTE See ‘/data/gannet/ripley/R/packages/tests-noLD/rAltmetric.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 2:04.09, 39.67 + 7.61