* using log directory ‘/data/localhost/ripley/R/packages/tests-noLD/aidR.Rcheck’ * using R Under development (unstable) (2026-10-28 r90779) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2) GNU Fortran (GCC) 16.2.1 20260819 (Red Hat 16.2.1-2) * running under: Fedora Linux 44 (Server Edition) * using session charset: UTF-8 * current time: 2026-10-28 19:17:27 UTC * using option ‘--no-stop-on-test-error’ * checking for file ‘aidR/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘aidR’ version ‘0.2.4’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘aidR’ can be installed ... [7s/18s] OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [11s/25s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [6s/11s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ [108s/249s] [108s/250s] ERROR Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(aidR) > > test_check("aidR") Parsing data for id 1... Parsing data for id 1... Parsing data for id 1... Parsing data for id 1... Parsing data for id 2... Parsing data for id 1... Parsing data for id 1... Parsing data for id 1... Parsing data for id 1... Parsing data for id 1... [1] "All glucose values in range" Parsing data for id 1... [1] "All glucose values in range" Gap found in data for subject id: 1, that exceeds 12 hours. Gap found in data for subject id: 1, that exceeds 12 hours. Gap found in data for subject id: 1, that exceeds 12 hours. Gap found in data for subject id: 1, that exceeds 12 hours. Parsing data for id 1... [1] "All glucose values in range" Saving _problems/test-06_conversions_iglu-57.R Parsing data for id 1... Parsing data for id 2... Parsing data for id 1... [ FAIL 1 | WARN 0 | SKIP 0 | PASS 109 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test-06_conversions_iglu.R:57:5'): the iglu plotting functions draw the same data from the CSV and the conversion ── Expected `layers_converted` to equal `layers_from_file`. Differences: actual vs expected count density ncount ndensity y ymin ymax actual[960, ] 0 0.00000000 0.00000000 0.00000000 0 0 0 actual[961, ] 0 0.00000000 0.00000000 0.00000000 0 0 0 actual[962, ] 0 0.00000000 0.00000000 0.00000000 0 0 0 - actual[963, ] 289 0.83962812 0.56007752 0.56007752 289 0 289 + expected[963, ] 289 0.83938426 0.56007752 0.56007752 289 0 289 - actual[964, ] 516 1.49912841 1.00000000 1.00000000 516 0 516 + expected[964, ] 516 1.49869300 1.00000000 1.00000000 516 0 516 - actual[965, ] 466 1.35386403 0.90310078 0.90310078 466 0 466 + expected[965, ] 466 1.35347081 0.90310078 0.90310078 466 0 466 - actual[966, ] 442 1.28413713 0.85658915 0.85658915 442 0 442 + expected[966, ] 442 1.28376416 0.85658915 0.85658915 442 0 442 - actual[967, ] 364 1.05752469 0.70542636 0.70542636 364 0 364 + expected[967, ] 364 1.05721754 0.70542636 0.70542636 364 0 364 - actual[968, ] 321 0.93259733 0.62209302 0.62209302 321 0 321 + expected[968, ] 321 0.93232646 0.62209302 0.62209302 321 0 321 - actual[969, ] 269 0.78152237 0.52131783 0.52131783 269 0 269 + expected[969, ] 269 0.78129538 0.52131783 0.52131783 269 0 269 and 7 more ... actual vs expected count density ncount ndensity y ymin ymax actual[1192, ] 0 0.00000000 0.00000000 0.00000000 0 0 0 actual[1193, ] 0 0.00000000 0.00000000 0.00000000 0 0 0 actual[1194, ] 0 0.00000000 0.00000000 0.00000000 0 0 0 - actual[1195, ] 93 1.09154930 0.63698630 0.63698630 93 0 93 + expected[1195, ] 92 1.08108108 0.63013699 0.63013699 92 0 92 - actual[1196, ] 146 1.71361502 1.00000000 1.00000000 146 0 146 + expected[1196, ] 146 1.71562867 1.00000000 1.00000000 146 0 146 - actual[1197, ] 109 1.27934272 0.74657534 0.74657534 109 0 109 + expected[1197, ] 109 1.28084606 0.74657534 0.74657534 109 0 109 - actual[1198, ] 115 1.34976526 0.78767123 0.78767123 115 0 115 + expected[1198, ] 115 1.35135135 0.78767123 0.78767123 115 0 115 - actual[1199, ] 78 0.91549296 0.53424658 0.53424658 78 0 78 + expected[1199, ] 78 0.91656874 0.53424658 0.53424658 78 0 78 - actual[1200, ] 83 0.97417840 0.56849315 0.56849315 83 0 83 + expected[1200, ] 83 0.97532315 0.56849315 0.56849315 83 0 83 - actual[1201, ] 73 0.85680751 0.50000000 0.50000000 73 0 73 + expected[1201, ] 73 0.85781434 0.50000000 0.50000000 73 0 73 and 7 more ... `actual$count[970:976]`: 254.0 231.0 184.0 106.0 0.0 0.0 0.0 `expected$count[970:976]`: 254.0 231.0 184.0 107.0 0.0 0.0 0.0 `actual$count[1192:1198]`: 0.0 0.0 0.0 93.0 146.0 109.0 115.0 `expected$count[1192:1198]`: 0.0 0.0 0.0 92.0 146.0 109.0 115.0 actual$density | expected$density [960] 0.00000 | 0.00000 [960] [961] 0.00000 | 0.00000 [961] [962] 0.00000 | 0.00000 [962] [963] 0.83963 - 0.83938 [963] [964] 1.49913 - 1.49869 [964] [965] 1.35386 - 1.35347 [965] [966] 1.28414 - 1.28376 [966] [967] 1.05752 - 1.05722 [967] [968] 0.93260 - 0.93233 [968] [969] 0.78152 - 0.78130 [969] ... ... ... and 7 more ... actual$density | expected$density [1192] 0.00000 | 0.00000 [1192] [1193] 0.00000 | 0.00000 [1193] [1194] 0.00000 | 0.00000 [1194] [1195] 1.09155 - 1.08108 [1195] [1196] 1.71362 - 1.71563 [1196] [1197] 1.27934 - 1.28085 [1197] [1198] 1.34977 - 1.35135 [1198] [1199] 0.91549 - 0.91657 [1199] [1200] 0.97418 - 0.97532 [1200] [1201] 0.85681 - 0.85781 [1201] ... ... ... and 7 more ... `actual$ncount[970:976]`: 0.4922 0.4477 0.3566 0.2054 0.0000 0.0000 0.0000 `expected$ncount[970:976]`: 0.4922 0.4477 0.3566 0.2074 0.0000 0.0000 0.0000 `actual$ncount[1192:1198]`: 0.0000 0.0000 0.0000 0.6370 1.0000 0.7466 0.7877 `expected$ncount[1192:1198]`: 0.0000 0.0000 0.0000 0.6301 1.0000 0.7466 0.7877 actual$ndensity | expected$ndensity [970] 0.492248062 | 0.492248062 [970] [971] 0.447674419 | 0.447674419 [971] [972] 0.356589147 | 0.356589147 [972] [973] 0.205426357 - 0.207364341 [973] [974] 0.000000000 | 0.000000000 [974] [975] 0.000000000 | 0.000000000 [975] [976] 0.000000000 | 0.000000000 [976] actual$ndensity | expected$ndensity [1192] 0.000000000 | 0.000000000 [1192] [1193] 0.000000000 | 0.000000000 [1193] [1194] 0.000000000 | 0.000000000 [1194] [1195] 0.636986301 - 0.630136986 [1195] [1196] 1.000000000 | 1.000000000 [1196] [1197] 0.746575342 | 0.746575342 [1197] [1198] 0.787671233 | 0.787671233 [1198] `actual$y[1192:1198]`: 0.0 0.0 0.0 93.0 146.0 109.0 115.0 `expected$y[1192:1198]`: 0.0 0.0 0.0 92.0 146.0 109.0 115.0 `actual$ymin[970:976]`: 0.0 0.0 0.0 93.0 146.0 109.0 115.0 `expected$ymin[970:976]`: 0.0 0.0 0.0 92.0 146.0 109.0 115.0 `actual$ymax[1192:1198]`: 0.0 0.0 0.0 93.0 146.0 109.0 115.0 `expected$ymax[1192:1198]`: 0.0 0.0 0.0 92.0 146.0 109.0 115.0 hist_roc [ FAIL 1 | WARN 0 | SKIP 0 | PASS 109 ] Error: ! Test failures. Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [48s/106s] OK * checking PDF version of manual ... [7s/17s] OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR See ‘/data/localhost/ripley/R/packages/tests-noLD/aidR.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 8:13.64, 206.13 + 11.31