* using log directory ‘/data/gannet/ripley/R/packages/tests-noLD/JuliaConnectoR.Rcheck’
* using R Under development (unstable) (2025-12-07 r89119)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
    GNU Fortran (GCC) 15.1.1 20250521 (Red Hat 15.1.1-2)
* running under: Fedora Linux 42 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘JuliaConnectoR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘JuliaConnectoR’ version ‘1.1.4’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘JuliaConnectoR’ can be installed ... [5s/23s] OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [8s/19s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [1s/60s] ERROR
Running examples in ‘JuliaConnectoR-Ex.R’ failed
The error most likely occurred in:

> ### Name: juliaCall
> ### Title: Call a Julia function by name
> ### Aliases: juliaCall
> 
> ### ** Examples
> 
> if (juliaSetupOk()) {
+ 
+    juliaCall("/", 4, 2)
+    juliaCall("Base.div", 4, 2)
+    juliaCall("sin.", c(1,2,3))
+    juliaCall("Base.cos.", c(1,2,3))
+ 
+ }
Starting Julia ...
Julia startup:
Error in runJuliaServer(multiclient = FALSE) : 
  Timeout while waiting for response from Julia server
Calls: juliaCall ... ensureJuliaConnection -> startJulia -> juliaConnection -> runJuliaServer
Execution halted
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’ [0m/21m]
 [0m/21m] ERROR
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > library(testthat)
  > library(JuliaConnectoR)
  > library(utils)
  > 
  > if (juliaSetupOk()) {
  +    test_check("JuliaConnectoR")
  + } else if (Sys.getenv("GITHUB_ACTIONS") == "true") {
  +    stop("Julia setup on GitHub Actions is not OK")
  + }
  Julia startup:
  Saving _problems/test-5.R
  Connecting to Julia TCP server at localhost:11980 ...
    Activating project at `~/R/packages/tests-noLD/JuliaConnectoR.Rcheck/JuliaConnectoR/examples/IndexedTables-Project/1_10`
  ┌ Warning: The active manifest file has dependencies that were resolved with a different julia version (1.10.5). Unexpected behavior may occur.
  └ @ nothing /data/gannet/ripley/R/packages/tests-noLD/JuliaConnectoR.Rcheck/JuliaConnectoR/examples/IndexedTables-Project/1_10/Manifest.toml:0
  [ FAIL 2 | WARN 0 | SKIP 5 | PASS 521 ]
  
  ══ Skipped tests (5) ═══════════════════════════════════════════════════════════
  • On CRAN (5): 'test.R:74:4', 'test.R:1074:4', 'test.R:1113:4',
    'test.R:1476:4', 'test.R:1516:4'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test.R:5:4'): Some smoke tests ──────────────────────────────────────
  Error in `runJuliaServer(multiclient = FALSE)`: Timeout while waiting for response from Julia server
  Backtrace:
      ▆
   1. ├─testthat::expect_equal(juliaCall("prod", c(1, 2, 3)), 6) at test.R:5:4
   2. │ └─testthat::quasi_label(enquo(object), label)
   3. │   └─rlang::eval_bare(expr, quo_get_env(quo))
   4. └─JuliaConnectoR::juliaCall("prod", c(1, 2, 3))
   5.   └─JuliaConnectoR:::ensureJuliaConnection()
   6.     └─JuliaConnectoR:::startJulia()
   7.       └─JuliaConnectoR:::juliaConnection()
   8.         └─JuliaConnectoR:::runJuliaServer(multiclient = FALSE)
  ── Error ('test.R:19:7'): Output is transferred ────────────────────────────────
  Error in `runJuliaServer(multiclient = FALSE)`: Timeout while waiting for response from Julia server
  Backtrace:
       ▆
    1. ├─testthat::capture_output(...) at test.R:18:4
    2. │ └─testthat::capture_output_lines(code, print, width = width)
    3. │   └─testthat:::eval_with_output(code, print = print, width = width)
    4. │     ├─withr::with_output_sink(path, withVisible(code))
    5. │     │ └─base::force(code)
    6. │     └─base::withVisible(code)
    7. └─JuliaConnectoR::juliaCall("println", as.integer(22)) at test.R:19:7
    8.   └─JuliaConnectoR:::ensureJuliaConnection()
    9.     └─JuliaConnectoR:::startJulia()
   10.       └─JuliaConnectoR:::juliaConnection()
   11.         └─JuliaConnectoR:::runJuliaServer(multiclient = FALSE)
  
  [ FAIL 2 | WARN 0 | SKIP 5 | PASS 521 ]
  Error:
  ! Test failures.
  Execution halted
* checking PDF version of manual ... [10s/31s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 2 ERRORs
See
  ‘/data/gannet/ripley/R/packages/tests-noLD/JuliaConnectoR.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 24:55.70, 48.31 + 7.91