==1728343== Memcheck, a memory error detector
==1728343== Copyright (C) 2002-2024, and GNU GPL'd, by Julian Seward et al.
==1728343== Using Valgrind-3.24.0 and LibVEX; rerun with -h for copyright info
==1728343== Command: /data/blackswan/ripley/R/R-devel-vg/bin/exec/R -f testthat.R --restore --save --no-readline --vanilla
==1728343== 

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> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
> 
> library(testthat)
> library(Colossus)
> 
> test_check("Colossus")
==1728343== realloc() with size 0
==1728343==    at 0x484B347: realloc (/builddir/build/BUILD/valgrind-3.24.0/coregrind/m_replacemalloc/vg_replace_malloc.c:1801)
==1728343==    by 0x1E26637E: aligned_realloc (R-devel/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:221)
==1728343==    by 0x1E26637E: conditional_aligned_realloc<true> (R-devel/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:270)
==1728343==    by 0x1E26637E: conditional_aligned_realloc_new_auto<double, true> (R-devel/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:426)
==1728343==    by 0x1E26637E: conservativeResize (R-devel/site-library/RcppEigen/include/Eigen/src/Core/DenseStorage.h:476)
==1728343==    by 0x1E26637E: Eigen::internal::conservative_resize_like_impl<Eigen::Matrix<double, -1, -1, 0, -1, -1>, Eigen::Matrix<double, -1, -1, 0, -1, -1>, false>::run(Eigen::DenseBase<Eigen::Matrix<double, -1, -1, 0, -1, -1> >&, long, long) (R-devel/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:1017)
==1728343==    by 0x1E355154: Log_Bound(double&, Eigen::Matrix<double, -1, -1, 0, -1, -1> const&, Eigen::Matrix<double, -1, 1, 0, -1, 1> const&, double const&, double const&, double const&, int const&, int const&, int const&, int const&, Rcpp::Vector<13, Rcpp::PreserveStorage>, int const&, int const&, std::vector<double, std::allocator<double> >&, Eigen::Matrix<double, -1, 1, 0, -1, 1> const&, bool, bool&, int, double) (packages/tests-vg/Colossus/src/Step_Calc.cpp:114)
==1728343==    by 0x1E281364: LogLik_Poisson_Omnibus_Log_Bound(Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, Rcpp::Vector<13, Rcpp::PreserveStorage>, Rcpp::Vector<16, Rcpp::PreserveStorage>, Eigen::Ref<Eigen::Matrix<double, -1, 1, 0, -1, 1>, 0, Eigen::InnerStride<1> >, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1>, 0, Eigen::OuterStride<-1> >, Rcpp::Vector<13, Rcpp::PreserveStorage>, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, double, Rcpp::Vector<14, Rcpp::PreserveStorage>, int, int, double, double, double, double, int, Rcpp::Vector<13, Rcpp::PreserveStorage>, int, int, Rcpp::Vector<19, Rcpp::PreserveStorage>, double, Rcpp::Vector<13, Rcpp::PreserveStorage>, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, Eigen::Ref<Eigen::Matrix<double, -1, 1, 0, -1, 1> const, 0, Eigen::InnerStride<1> > const&, double, int, int, double) (packages/tests-vg/Colossus/src/Main_Bound.cpp:1539)
==1728343==    by 0x1E32F272: pois_Omnibus_Bounds_transition(Eigen::Matrix<double, -1, -1, 0, -1, -1>, Rcpp::Vector<13, Rcpp::PreserveStorage>, Rcpp::Vector<16, Rcpp::PreserveStorage>, Rcpp::Vector<14, Rcpp::PreserveStorage>, Rcpp::Vector<13, Rcpp::PreserveStorage>, Eigen::Matrix<double, -1, -1, 0, -1, -1>, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, Rcpp::Vector<19, Rcpp::PreserveStorage>, Rcpp::Vector<13, Rcpp::PreserveStorage>, int, Eigen::Matrix<double, -1, -1, 0, -1, -1>, Rcpp::Vector<19, Rcpp::PreserveStorage>, Eigen::Matrix<double, -1, -1, 0, -1, -1>, Eigen::Matrix<double, -1, 1, 0, -1, 1>) (packages/tests-vg/Colossus/src/R_Interface.cpp:562)
==1728343==    by 0x1E349322: _Colossus_pois_Omnibus_Bounds_transition (packages/tests-vg/Colossus/src/RcppExports.cpp:216)
==1728343==    by 0x4A6EDF: R_doDotCall (svn/R-devel/src/main/dotcode.c:825)
==1728343==    by 0x4E1143: bcEval_loop (svn/R-devel/src/main/eval.c:8664)
==1728343==    by 0x4F1277: bcEval (svn/R-devel/src/main/eval.c:7497)
==1728343==    by 0x4F1277: bcEval (svn/R-devel/src/main/eval.c:7482)
==1728343==    by 0x4F15AA: Rf_eval (svn/R-devel/src/main/eval.c:1167)
==1728343==    by 0x4F332D: R_execClosure (svn/R-devel/src/main/eval.c:2389)
==1728343==    by 0x4F3FE6: applyClosure_core (svn/R-devel/src/main/eval.c:2302)
==1728343==  Address 0x15ef9ae0 is 0 bytes inside a block of size 8 alloc'd
==1728343==    at 0x4843866: malloc (/builddir/build/BUILD/valgrind-3.24.0/coregrind/m_replacemalloc/vg_replace_malloc.c:446)
==1728343==    by 0x1E355969: aligned_malloc (R-devel/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:182)
==1728343==    by 0x1E355969: conditional_aligned_malloc<true> (R-devel/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:241)
==1728343==    by 0x1E355969: conditional_aligned_new_auto<double, true> (R-devel/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:404)
==1728343==    by 0x1E355969: resize (R-devel/site-library/RcppEigen/include/Eigen/src/Core/DenseStorage.h:486)
==1728343==    by 0x1E355969: resize (R-devel/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:285)
==1728343==    by 0x1E355969: resizeLike<Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> > (R-devel/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:369)
==1728343==    by 0x1E355969: PlainObjectBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> > (R-devel/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:593)
==1728343==    by 0x1E355969: Matrix<Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> > (R-devel/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:423)
==1728343==    by 0x1E355969: Log_Bound(double&, Eigen::Matrix<double, -1, -1, 0, -1, -1> const&, Eigen::Matrix<double, -1, 1, 0, -1, 1> const&, double const&, double const&, double const&, int const&, int const&, int const&, int const&, Rcpp::Vector<13, Rcpp::PreserveStorage>, int const&, int const&, std::vector<double, std::allocator<double> >&, Eigen::Matrix<double, -1, 1, 0, -1, 1> const&, bool, bool&, int, double) (packages/tests-vg/Colossus/src/Step_Calc.cpp:113)
==1728343==    by 0x1E281364: LogLik_Poisson_Omnibus_Log_Bound(Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, Rcpp::Vector<13, Rcpp::PreserveStorage>, Rcpp::Vector<16, Rcpp::PreserveStorage>, Eigen::Ref<Eigen::Matrix<double, -1, 1, 0, -1, 1>, 0, Eigen::InnerStride<1> >, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1>, 0, Eigen::OuterStride<-1> >, Rcpp::Vector<13, Rcpp::PreserveStorage>, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, double, Rcpp::Vector<14, Rcpp::PreserveStorage>, int, int, double, double, double, double, int, Rcpp::Vector<13, Rcpp::PreserveStorage>, int, int, Rcpp::Vector<19, Rcpp::PreserveStorage>, double, Rcpp::Vector<13, Rcpp::PreserveStorage>, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, Eigen::Ref<Eigen::Matrix<double, -1, 1, 0, -1, 1> const, 0, Eigen::InnerStride<1> > const&, double, int, int, double) (packages/tests-vg/Colossus/src/Main_Bound.cpp:1539)
==1728343==    by 0x1E32F272: pois_Omnibus_Bounds_transition(Eigen::Matrix<double, -1, -1, 0, -1, -1>, Rcpp::Vector<13, Rcpp::PreserveStorage>, Rcpp::Vector<16, Rcpp::PreserveStorage>, Rcpp::Vector<14, Rcpp::PreserveStorage>, Rcpp::Vector<13, Rcpp::PreserveStorage>, Eigen::Matrix<double, -1, -1, 0, -1, -1>, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, Rcpp::Vector<19, Rcpp::PreserveStorage>, Rcpp::Vector<13, Rcpp::PreserveStorage>, int, Eigen::Matrix<double, -1, -1, 0, -1, -1>, Rcpp::Vector<19, Rcpp::PreserveStorage>, Eigen::Matrix<double, -1, -1, 0, -1, -1>, Eigen::Matrix<double, -1, 1, 0, -1, 1>) (packages/tests-vg/Colossus/src/R_Interface.cpp:562)
==1728343==    by 0x1E349322: _Colossus_pois_Omnibus_Bounds_transition (packages/tests-vg/Colossus/src/RcppExports.cpp:216)
==1728343==    by 0x4A6EDF: R_doDotCall (svn/R-devel/src/main/dotcode.c:825)
==1728343==    by 0x4E1143: bcEval_loop (svn/R-devel/src/main/eval.c:8664)
==1728343==    by 0x4F1277: bcEval (svn/R-devel/src/main/eval.c:7497)
==1728343==    by 0x4F1277: bcEval (svn/R-devel/src/main/eval.c:7482)
==1728343==    by 0x4F15AA: Rf_eval (svn/R-devel/src/main/eval.c:1167)
==1728343==    by 0x4F332D: R_execClosure (svn/R-devel/src/main/eval.c:2389)
==1728343==    by 0x4F3FE6: applyClosure_core (svn/R-devel/src/main/eval.c:2302)
==1728343==    by 0x4F49D8: Rf_applyClosure (svn/R-devel/src/main/eval.c:2324)
==1728343== 
==1728343== realloc() with size 0
==1728343==    at 0x484B347: realloc (/builddir/build/BUILD/valgrind-3.24.0/coregrind/m_replacemalloc/vg_replace_malloc.c:1801)
==1728343==    by 0x1E26637E: aligned_realloc (R-devel/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:221)
==1728343==    by 0x1E26637E: conditional_aligned_realloc<true> (R-devel/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:270)
==1728343==    by 0x1E26637E: conditional_aligned_realloc_new_auto<double, true> (R-devel/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:426)
==1728343==    by 0x1E26637E: conservativeResize (R-devel/site-library/RcppEigen/include/Eigen/src/Core/DenseStorage.h:476)
==1728343==    by 0x1E26637E: Eigen::internal::conservative_resize_like_impl<Eigen::Matrix<double, -1, -1, 0, -1, -1>, Eigen::Matrix<double, -1, -1, 0, -1, -1>, false>::run(Eigen::DenseBase<Eigen::Matrix<double, -1, -1, 0, -1, -1> >&, long, long) (R-devel/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:1017)
==1728343==    by 0x1E355154: Log_Bound(double&, Eigen::Matrix<double, -1, -1, 0, -1, -1> const&, Eigen::Matrix<double, -1, 1, 0, -1, 1> const&, double const&, double const&, double const&, int const&, int const&, int const&, int const&, Rcpp::Vector<13, Rcpp::PreserveStorage>, int const&, int const&, std::vector<double, std::allocator<double> >&, Eigen::Matrix<double, -1, 1, 0, -1, 1> const&, bool, bool&, int, double) (packages/tests-vg/Colossus/src/Step_Calc.cpp:114)
==1728343==    by 0x1E2823A4: LogLik_Poisson_Omnibus_Log_Bound(Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, Rcpp::Vector<13, Rcpp::PreserveStorage>, Rcpp::Vector<16, Rcpp::PreserveStorage>, Eigen::Ref<Eigen::Matrix<double, -1, 1, 0, -1, 1>, 0, Eigen::InnerStride<1> >, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1>, 0, Eigen::OuterStride<-1> >, Rcpp::Vector<13, Rcpp::PreserveStorage>, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, double, Rcpp::Vector<14, Rcpp::PreserveStorage>, int, int, double, double, double, double, int, Rcpp::Vector<13, Rcpp::PreserveStorage>, int, int, Rcpp::Vector<19, Rcpp::PreserveStorage>, double, Rcpp::Vector<13, Rcpp::PreserveStorage>, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, Eigen::Ref<Eigen::Matrix<double, -1, 1, 0, -1, 1> const, 0, Eigen::InnerStride<1> > const&, double, int, int, double) (packages/tests-vg/Colossus/src/Main_Bound.cpp:1662)
==1728343==    by 0x1E32F272: pois_Omnibus_Bounds_transition(Eigen::Matrix<double, -1, -1, 0, -1, -1>, Rcpp::Vector<13, Rcpp::PreserveStorage>, Rcpp::Vector<16, Rcpp::PreserveStorage>, Rcpp::Vector<14, Rcpp::PreserveStorage>, Rcpp::Vector<13, Rcpp::PreserveStorage>, Eigen::Matrix<double, -1, -1, 0, -1, -1>, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, Rcpp::Vector<19, Rcpp::PreserveStorage>, Rcpp::Vector<13, Rcpp::PreserveStorage>, int, Eigen::Matrix<double, -1, -1, 0, -1, -1>, Rcpp::Vector<19, Rcpp::PreserveStorage>, Eigen::Matrix<double, -1, -1, 0, -1, -1>, Eigen::Matrix<double, -1, 1, 0, -1, 1>) (packages/tests-vg/Colossus/src/R_Interface.cpp:562)
==1728343==    by 0x1E349322: _Colossus_pois_Omnibus_Bounds_transition (packages/tests-vg/Colossus/src/RcppExports.cpp:216)
==1728343==    by 0x4A6EDF: R_doDotCall (svn/R-devel/src/main/dotcode.c:825)
==1728343==    by 0x4E1143: bcEval_loop (svn/R-devel/src/main/eval.c:8664)
==1728343==    by 0x4F1277: bcEval (svn/R-devel/src/main/eval.c:7497)
==1728343==    by 0x4F1277: bcEval (svn/R-devel/src/main/eval.c:7482)
==1728343==    by 0x4F15AA: Rf_eval (svn/R-devel/src/main/eval.c:1167)
==1728343==    by 0x4F332D: R_execClosure (svn/R-devel/src/main/eval.c:2389)
==1728343==    by 0x4F3FE6: applyClosure_core (svn/R-devel/src/main/eval.c:2302)
==1728343==  Address 0x14a1e810 is 0 bytes inside a block of size 8 alloc'd
==1728343==    at 0x4843866: malloc (/builddir/build/BUILD/valgrind-3.24.0/coregrind/m_replacemalloc/vg_replace_malloc.c:446)
==1728343==    by 0x1E355969: aligned_malloc (R-devel/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:182)
==1728343==    by 0x1E355969: conditional_aligned_malloc<true> (R-devel/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:241)
==1728343==    by 0x1E355969: conditional_aligned_new_auto<double, true> (R-devel/site-library/RcppEigen/include/Eigen/src/Core/util/Memory.h:404)
==1728343==    by 0x1E355969: resize (R-devel/site-library/RcppEigen/include/Eigen/src/Core/DenseStorage.h:486)
==1728343==    by 0x1E355969: resize (R-devel/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:285)
==1728343==    by 0x1E355969: resizeLike<Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> > (R-devel/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:369)
==1728343==    by 0x1E355969: PlainObjectBase<Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> > (R-devel/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:593)
==1728343==    by 0x1E355969: Matrix<Eigen::Block<const Eigen::Matrix<double, -1, -1>, 1, -1, false> > (R-devel/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:423)
==1728343==    by 0x1E355969: Log_Bound(double&, Eigen::Matrix<double, -1, -1, 0, -1, -1> const&, Eigen::Matrix<double, -1, 1, 0, -1, 1> const&, double const&, double const&, double const&, int const&, int const&, int const&, int const&, Rcpp::Vector<13, Rcpp::PreserveStorage>, int const&, int const&, std::vector<double, std::allocator<double> >&, Eigen::Matrix<double, -1, 1, 0, -1, 1> const&, bool, bool&, int, double) (packages/tests-vg/Colossus/src/Step_Calc.cpp:113)
==1728343==    by 0x1E2823A4: LogLik_Poisson_Omnibus_Log_Bound(Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, Rcpp::Vector<13, Rcpp::PreserveStorage>, Rcpp::Vector<16, Rcpp::PreserveStorage>, Eigen::Ref<Eigen::Matrix<double, -1, 1, 0, -1, 1>, 0, Eigen::InnerStride<1> >, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1>, 0, Eigen::OuterStride<-1> >, Rcpp::Vector<13, Rcpp::PreserveStorage>, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, double, Rcpp::Vector<14, Rcpp::PreserveStorage>, int, int, double, double, double, double, int, Rcpp::Vector<13, Rcpp::PreserveStorage>, int, int, Rcpp::Vector<19, Rcpp::PreserveStorage>, double, Rcpp::Vector<13, Rcpp::PreserveStorage>, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, Eigen::Ref<Eigen::Matrix<double, -1, 1, 0, -1, 1> const, 0, Eigen::InnerStride<1> > const&, double, int, int, double) (packages/tests-vg/Colossus/src/Main_Bound.cpp:1662)
==1728343==    by 0x1E32F272: pois_Omnibus_Bounds_transition(Eigen::Matrix<double, -1, -1, 0, -1, -1>, Rcpp::Vector<13, Rcpp::PreserveStorage>, Rcpp::Vector<16, Rcpp::PreserveStorage>, Rcpp::Vector<14, Rcpp::PreserveStorage>, Rcpp::Vector<13, Rcpp::PreserveStorage>, Eigen::Matrix<double, -1, -1, 0, -1, -1>, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, Rcpp::Vector<19, Rcpp::PreserveStorage>, Rcpp::Vector<13, Rcpp::PreserveStorage>, int, Eigen::Matrix<double, -1, -1, 0, -1, -1>, Rcpp::Vector<19, Rcpp::PreserveStorage>, Eigen::Matrix<double, -1, -1, 0, -1, -1>, Eigen::Matrix<double, -1, 1, 0, -1, 1>) (packages/tests-vg/Colossus/src/R_Interface.cpp:562)
==1728343==    by 0x1E349322: _Colossus_pois_Omnibus_Bounds_transition (packages/tests-vg/Colossus/src/RcppExports.cpp:216)
==1728343==    by 0x4A6EDF: R_doDotCall (svn/R-devel/src/main/dotcode.c:825)
==1728343==    by 0x4E1143: bcEval_loop (svn/R-devel/src/main/eval.c:8664)
==1728343==    by 0x4F1277: bcEval (svn/R-devel/src/main/eval.c:7497)
==1728343==    by 0x4F1277: bcEval (svn/R-devel/src/main/eval.c:7482)
==1728343==    by 0x4F15AA: Rf_eval (svn/R-devel/src/main/eval.c:1167)
==1728343==    by 0x4F332D: R_execClosure (svn/R-devel/src/main/eval.c:2389)
==1728343==    by 0x4F3FE6: applyClosure_core (svn/R-devel/src/main/eval.c:2302)
==1728343==    by 0x4F49D8: Rf_applyClosure (svn/R-devel/src/main/eval.c:2324)
==1728343== 
[ FAIL 0 | WARN 0 | SKIP 15 | PASS 804 ]

══ Skipped tests (15) ══════════════════════════════════════════════════════════
• Cran Skip (15): 'test-Assigned.R:72:5', 'test-Cox_Regression.R:215:5',
  'test-Logbound.R:19:5', 'test-Logbound.R:86:5', 'test-Logbound.R:129:5',
  'test-Logbound.R:170:5', 'test-Logbound.R:218:5', 'test-Logbound.R:296:5',
  'test-Logbound.R:324:5', 'test-Omnibus.R:21:5', 'test-Omnibus.R:66:5',
  'test-Omnibus.R:150:5', 'test-Omnibus.R:203:5', 'test-Omnibus.R:245:5',
  'test-Omnibus.R:443:5'

[ FAIL 0 | WARN 0 | SKIP 15 | PASS 804 ]
> 
> proc.time()
    user   system  elapsed 
3175.960  638.152 3481.266 
==1728343== 
==1728343== HEAP SUMMARY:
==1728343==     in use at exit: 172,465,713 bytes in 33,189 blocks
==1728343==   total heap usage: 9,045,113 allocs, 9,011,924 frees, 3,320,725,379 bytes allocated
==1728343== 
==1728343== 416 bytes in 1 blocks are possibly lost in loss record 238 of 3,654
==1728343==    at 0x484B133: calloc (/builddir/build/BUILD/valgrind-3.24.0/coregrind/m_replacemalloc/vg_replace_malloc.c:1675)
==1728343==    by 0x4011F63: UnknownInlinedFun (/usr/src/debug/glibc-2.39-38.fc40.x86_64/elf/../include/rtld-malloc.h:44)
==1728343==    by 0x4011F63: allocate_dtv (/usr/src/debug/glibc-2.39-38.fc40.x86_64/elf/../elf/dl-tls.c:395)
==1728343==    by 0x4012A61: _dl_allocate_tls (/usr/src/debug/glibc-2.39-38.fc40.x86_64/elf/../elf/dl-tls.c:673)
==1728343==    by 0x557CC03: allocate_stack (/usr/src/debug/glibc-2.39-38.fc40.x86_64/nptl/allocatestack.c:431)
==1728343==    by 0x557CC03: pthread_create@@GLIBC_2.34 (/usr/src/debug/glibc-2.39-38.fc40.x86_64/nptl/pthread_create.c:660)
==1728343==    by 0x54B0076: gomp_team_start (/usr/src/debug/gcc-14.2.1-3.fc40.x86_64/obj-x86_64-redhat-linux/x86_64-redhat-linux/libgomp/../../../libgomp/team.c:859)
==1728343==    by 0x54A60A0: GOMP_parallel (/usr/src/debug/gcc-14.2.1-3.fc40.x86_64/obj-x86_64-redhat-linux/x86_64-redhat-linux/libgomp/../../../libgomp/parallel.c:176)
==1728343==    by 0x1E388948: Make_subterms(int const&, Rcpp::Vector<13, Rcpp::PreserveStorage> const&, Rcpp::Vector<16, Rcpp::PreserveStorage> const&, Rcpp::Vector<13, Rcpp::PreserveStorage> const&, int const&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, 1, 0, -1, 1> const&, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, double const&, double const&, int const&, Rcpp::Vector<13, Rcpp::PreserveStorage> const&) (packages/tests-vg/Colossus/src/Subterms_Risk.cpp:73)
==1728343==    by 0x1E301BCD: Pois_Term_Risk_Calc(std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, Rcpp::Vector<16, Rcpp::PreserveStorage> const&, Rcpp::Vector<13, Rcpp::PreserveStorage> const&, int const&, int const&, Rcpp::Vector<13, Rcpp::PreserveStorage> const&, int, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, 1, 0, -1, 1>, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, double const&, double const&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, -1, 0, -1, -1>&, Eigen::Matrix<double, -1, 1, 0, -1, 1> const&, int const&, Rcpp::Vector<13, Rcpp::PreserveStorage> const&, int, Rcpp::Vector<19, Rcpp::PreserveStorage>&, double, Rcpp::Vector<13, Rcpp::PreserveStorage> const&) (packages/tests-vg/Colossus/src/Omnibus_Pieces.cpp:376)
==1728343==    by 0x1E2B136E: LogLik_Pois_Omnibus(Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, Rcpp::Vector<13, Rcpp::PreserveStorage>, Rcpp::Vector<16, Rcpp::PreserveStorage>, Rcpp::Matrix<14, Rcpp::PreserveStorage>&, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1>, 0, Eigen::OuterStride<-1> >, Rcpp::Vector<13, Rcpp::PreserveStorage>, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, double, Rcpp::Vector<19, Rcpp::PreserveStorage>, Rcpp::Vector<14, Rcpp::PreserveStorage>, int, int, double, double, double, double, int, Rcpp::Vector<13, Rcpp::PreserveStorage>, int, int, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, Rcpp::Vector<19, Rcpp::PreserveStorage>, double, Rcpp::Vector<13, Rcpp::PreserveStorage>, Eigen::Ref<Eigen::Matrix<double, -1, -1, 0, -1, -1> const, 0, Eigen::OuterStride<-1> > const&, Eigen::Ref<Eigen::Matrix<double, -1, 1, 0, -1, 1> const, 0, Eigen::InnerStride<1> > const&) (packages/tests-vg/Colossus/src/Main_Functions.cpp:920)
==1728343==    by 0x1E330E8B: pois_Omnibus_transition(Eigen::Matrix<double, -1, -1, 0, -1, -1>, Rcpp::Vector<13, Rcpp::PreserveStorage>, Rcpp::Vector<16, Rcpp::PreserveStorage>, Rcpp::Matrix<14, Rcpp::PreserveStorage>&, Rcpp::Vector<13, Rcpp::PreserveStorage>, Eigen::Matrix<double, -1, -1, 0, -1, -1>, int, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >, Rcpp::Vector<19, Rcpp::PreserveStorage>, Rcpp::Vector<13, Rcpp::PreserveStorage>, int, Eigen::Matrix<double, -1, -1, 0, -1, -1>, Rcpp::Vector<19, Rcpp::PreserveStorage>, Eigen::Matrix<double, -1, -1, 0, -1, -1>, Eigen::Matrix<double, -1, 1, 0, -1, 1>) (packages/tests-vg/Colossus/src/R_Interface.cpp:191)
==1728343==    by 0x1E346F13: _Colossus_pois_Omnibus_transition (packages/tests-vg/Colossus/src/RcppExports.cpp:63)
==1728343==    by 0x4A6EDF: R_doDotCall (svn/R-devel/src/main/dotcode.c:825)
==1728343== 
==1728343== LEAK SUMMARY:
==1728343==    definitely lost: 0 bytes in 0 blocks
==1728343==    indirectly lost: 0 bytes in 0 blocks
==1728343==      possibly lost: 416 bytes in 1 blocks
==1728343==    still reachable: 172,464,965 bytes in 33,186 blocks
==1728343==         suppressed: 332 bytes in 2 blocks
==1728343== Reachable blocks (those to which a pointer was found) are not shown.
==1728343== To see them, rerun with: --leak-check=full --show-leak-kinds=all
==1728343== 
==1728343== For lists of detected and suppressed errors, rerun with: -s
==1728343== ERROR SUMMARY: 3 errors from 3 contexts (suppressed: 0 from 0)