R Under development (unstable) (2024-07-05 r86875) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(maxnodf) > > test_check("maxnodf") | | | 0% | |=== | 4% | |====== | 8% | |======== | 12% | |=========== | 16% | |============== | 20% | |================= | 24% | |==================== | 28% | |====================== | 32% | |========================= | 36% | |============================ | 40% | |=============================== | 44% | |================================== | 48% | |==================================== | 52% | |======================================= | 56% | |========================================== | 60% | |============================================= | 64% | |================================================ | 68% | |================================================== | 72% | |===================================================== | 76% | |======================================================== | 80% | |=========================================================== | 84% | |============================================================== | 88% | |================================================================ | 92% | |=================================================================== | 96% | |======================================================================| 100% | | | 0% | | | 1% | |= | 1% | |= | 2% | |== | 2% | |== | 3% | |== | 4% | |=== | 4% | |=== | 5% | |==== | 5% | |==== | 6% | |===== | 6% | |===== | 7% | |===== | 8% | |====== | 8% | |====== | 9% | |======= | 9% | |======= | 10% | |======= | 11% | |======== | 11% | |======== | 12% | |========= | 12% | |========= | 13% | |========= | 14% | |========== | 14% | |========== | 15% | |=========== | 15% | |=========== | 16% | |============ | 16% | |============ | 17% | |============ | 18% | |============= | 18% | |============= | 19% | |============== | 19% | |============== | 20% | |============== | 21% | |=============== | 21% | |=============== | 22% | |================ | 22% | |================ | 23% | |================ | 24% | |================= | 24% | |================= | 25% | |================== | 25% | |================== | 26% | |=================== | 26% | |=================== | 27% | |=================== | 28% | |==================== | 28% | |==================== | 29% | |===================== | 29% | |===================== | 30% | |===================== | 31% | |====================== | 31% | |====================== | 32% | |======================= | 32% | |======================= | 33% | |======================= | 34% | |======================== | 34% | |======================== | 35% | |========================= | 35% | |========================= | 36% | |========================== | 36% | |========================== | 37% | |========================== | 38% | |=========================== | 38% | |=========================== | 39% | |============================ | 39% | |============================ | 40% | |============================ | 41% | |============================= | 41% | |============================= | 42% | |============================== | 42% | |============================== | 43% | |============================== | 44% | |=============================== | 44% | |=============================== | 45% | |================================ | 45% | |================================ | 46% | |================================= | 46% | |================================= | 47% | |================================= | 48% | |================================== | 48% | |================================== | 49% | |=================================== | 49% | |=================================== | 50% | |=================================== | 51% | |==================================== | 51% | |==================================== | 52% | |===================================== | 52% | |===================================== | 53% | |===================================== | 54% | |====================================== | 54% | |====================================== | 55% | |======================================= | 55% | |======================================= | 56% | |======================================== | 56% | |======================================== | 57% | |======================================== | 58% | |========================================= | 58% | |========================================= | 59% | |========================================== | 59% | |========================================== | 60% | |========================================== | 61% | |=========================================== | 61% | |=========================================== | 62% | |============================================ | 62% | |============================================ | 63% | |============================================ | 64% | |============================================= | 64% | |============================================= | 65% | |============================================== | 65% | |============================================== | 66% | |=============================================== | 66% | |=============================================== | 67% | |=============================================== | 68% | |================================================ | 68% | |================================================ | 69% | |================================================= | 69% | |================================================= | 70% | |================================================= | 71% | |================================================== | 71% | |================================================== | 72% | |=================================================== | 72% | |=================================================== | 73% | |=================================================== | 74% | |==================================================== | 74% | |==================================================== | 75% | |===================================================== | 75% | |===================================================== | 76% | |====================================================== | 76% | |====================================================== | 77% | |====================================================== | 78% | |======================================================= | 78% | |======================================================= | 79% | |======================================================== | 79% | |======================================================== | 80% | |======================================================== | 81% | |========================================================= | 81% | |========================================================= | 82% | |========================================================== | 82% | |========================================================== | 83% | |========================================================== | 84% | |=========================================================== | 84% | |=========================================================== | 85% | |============================================================ | 85% | |============================================================ | 86% | |============================================================= | 86% | |============================================================= | 87% | |============================================================= | 88% | |============================================================== | 88% | |============================================================== | 89% | |=============================================================== | 89% | |=============================================================== | 90% | |=============================================================== | 91% | |================================================================ | 91% | |================================================================ | 92% | |================================================================= | 92% | |================================================================= | 93% | |================================================================= | 94% | |================================================================== | 94% | |================================================================== | 95% | |=================================================================== | 95% | |=================================================================== | 96% | |==================================================================== | 96% | |==================================================================== | 97% | |==================================================================== | 98% | |===================================================================== | 98% | |===================================================================== | 99% | |======================================================================| 99% | |======================================================================| 100% | | | 0% | |=== | 4% | |====== | 8% | |======== | 12% | |=========== | 16% | |============== | 20% | |================= | 24% | |==================== | 28% | |====================== | 32% | |========================= | 36% | |============================ | 40% | |=============================== | 44% | |================================== | 48% | |==================================== | 52% | |======================================= | 56% | |========================================== | 60% | |============================================= | 64% | |================================================ | 68% | |================================================== | 72% | |===================================================== | 76% | |======================================================== | 80% | |=========================================================== | 84% | |============================================================== | 88% | |================================================================ | 92% | |=================================================================== | 96% | |======================================================================| 100% | | | 0% | |=== | 4% | |====== | 8% | |======== | 12% | |=========== | 16% | |============== | 20% | |================= | 24% | |==================== | 28% | |====================== | 32% | |========================= | 36% | |============================ | 40% | |=============================== | 44% | |================================== | 48% | |==================================== | 52% | |======================================= | 56% | |========================================== | 60% | |============================================= | 64% | |================================================ | 68% | |================================================== | 72% | |===================================================== | 76% | |======================================================== | 80% | |=========================================================== | 84% | |============================================================== | 88% | |================================================================ | 92% | |=================================================================== | 96% | |======================================================================| 100% | | | 0% | |=== | 4% | |====== | 8% | |======== | 12% | |=========== | 16% | |============== | 20% | |================= | 24% | |==================== | 28% | |====================== | 32% | |========================= | 36% | |============================ | 40% | |=============================== | 44% | |================================== | 48% | |==================================== | 52% | |======================================= | 56% | |========================================== | 60% | |============================================= | 64% | |================================================ | 68% | |================================================== | 72% | |===================================================== | 76% | |======================================================== | 80% | |=========================================================== | 84% | |============================================================== | 88% | |================================================================ | 92% | |=================================================================== | 96% | |======================================================================| 100% | | | 0% | |=== | 4% | |====== | 8% | |======== | 12% | |=========== | 16% | |============== | 20% | |================= | 24% | |==================== | 28% | |====================== | 32% | |========================= | 36% | |============================ | 40% | |=============================== | 44% | |================================== | 48% | |==================================== | 52% | |======================================= | 56% | |========================================== | 60% | |============================================= | 64% | |================================================ | 68% | |================================================== | 72% | |===================================================== | 76% | |======================================================== | 80% | |=========================================================== | 84% | |============================================================== | 88% | |================================================================ | 92% | |=================================================================== | 96% | |======================================================================| 100% | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% Hillclimb round: 1. Current NODF= 0.9 | | | 0% | |======================= | 33% | |=============================================== | 67% | |======================================================================| 100% [> ] 0 % /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/traits.h:46:46: runtime error: reference binding to misaligned address 0x000000000001 for type 'type', which requires 8 byte alignment 0x000000000001: note: pointer points here #0 0x7f57c1972170 in Rcpp::traits::r_vector_cache<14, Rcpp::PreserveStorage>::ref(long) /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/traits.h:46 #1 0x7f57c1972170 in Rcpp::Vector<14, Rcpp::PreserveStorage>::operator[](long) /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:340 #2 0x7f57c1972170 in sim_anneal_opt_cpp(Rcpp::Matrix<14, Rcpp::PreserveStorage>, double, int, double, double) /data/gannet/ripley/R/packages/tests-gcc-SAN/maxnodf/src/fast_toolbox.cpp:693 #3 0x7f57c1905d22 in _maxnodf_sim_anneal_opt_cpp /data/gannet/ripley/R/packages/tests-gcc-SAN/maxnodf/src/RcppExports.cpp:256 #4 0x58d0e9 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:766 #5 0x5958f7 in do_dotcall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:1437 #6 0x64de1f in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8140 #7 0x68e7f2 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7523 #8 0x68f06a in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #9 0x694dce in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2398 #10 0x697238 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2311 #11 0x68f67d in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2333 #12 0x68f67d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1285 #13 0x86e19a in R_DispatchOrEvalSP /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:657 #14 0x87df00 in do_subset3 /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:1264 #15 0x68faa8 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1237 #16 0x57b7b2 in do_External /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:573 #17 0x64de1f in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8140 #18 0x68e7f2 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7523 #19 0x68f06a in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #20 0x694dce in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2398 #21 0x697238 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2311 #22 0x68f67d in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2333 #23 0x68f67d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1285 #24 0x69985b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3009 #25 0x68faa8 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1237 #26 0x6a0fb2 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3955 #27 0x64de1f in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8140 #28 0x68e7f2 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7523 #29 0x68f06a in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #30 0x694dce in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2398 #31 0x697238 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2311 #32 0x68f67d in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2333 #33 0x68f67d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1285 #34 0x6a1e07 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3973 #35 0x64de1f in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8140 #36 0x68e7f2 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7523 #37 0x68f06a in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #38 0x694dce in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2398 #39 0x697238 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2311 #40 0x69e463 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2333 #41 0x69e463 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2465 #42 0x451404 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #43 0x742d97 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1409 #44 0x63f4c9 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8160 #45 0x68e7f2 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7523 #46 0x68f06a in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #47 0x694dce in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2398 #48 0x697238 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2311 #49 0x68f67d in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2333 #50 0x68f67d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1285 #51 0x714ead in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #52 0x715511 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #53 0x715654 in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1219 #54 0x7156a2 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1226 #55 0x41a7d8 in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #56 0x7f57d422950f in __libc_start_call_main (/lib64/libc.so.6+0x2950f) (BuildId: 8257ee907646e9b057197533d1e4ac8ede7a9c5c) #57 0x7f57d42295c8 in __libc_start_main_alias_2 (/lib64/libc.so.6+0x295c8) (BuildId: 8257ee907646e9b057197533d1e4ac8ede7a9c5c) #58 0x41d034 in _start (/data/gannet/ripley/R/gcc-SAN/bin/exec/R+0x41d034) (BuildId: 2066a1488f9f7902ee4e1b92fd9b3cdfa4e9bb35) /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:340:62: runtime error: reference binding to misaligned address 0x000000000001 for type 'type', which requires 8 byte alignment 0x000000000001: note: pointer points here #0 0x7f57c1972184 in Rcpp::Vector<14, Rcpp::PreserveStorage>::operator[](long) /data/gannet/ripley/R/test-dev/Rcpp/include/Rcpp/vector/Vector.h:340 #1 0x7f57c1972184 in sim_anneal_opt_cpp(Rcpp::Matrix<14, Rcpp::PreserveStorage>, double, int, double, double) /data/gannet/ripley/R/packages/tests-gcc-SAN/maxnodf/src/fast_toolbox.cpp:693 #2 0x7f57c1905d22 in _maxnodf_sim_anneal_opt_cpp /data/gannet/ripley/R/packages/tests-gcc-SAN/maxnodf/src/RcppExports.cpp:256 #3 0x58d0e9 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:766 #4 0x5958f7 in do_dotcall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:1437 #5 0x64de1f in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8140 #6 0x68e7f2 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7523 #7 0x68f06a in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #8 0x694dce in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2398 #9 0x697238 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2311 #10 0x68f67d in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2333 #11 0x68f67d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1285 #12 0x86e19a in R_DispatchOrEvalSP /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:657 #13 0x87df00 in do_subset3 /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:1264 #14 0x68faa8 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1237 #15 0x57b7b2 in do_External /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:573 #16 0x64de1f in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8140 #17 0x68e7f2 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7523 #18 0x68f06a in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #19 0x694dce in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2398 #20 0x697238 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2311 #21 0x68f67d in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2333 #22 0x68f67d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1285 #23 0x69985b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3009 #24 0x68faa8 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1237 #25 0x6a0fb2 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3955 #26 0x64de1f in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8140 #27 0x68e7f2 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7523 #28 0x68f06a in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x694dce in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2398 #30 0x697238 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2311 #31 0x68f67d in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2333 #32 0x68f67d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1285 #33 0x6a1e07 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3973 #34 0x64de1f in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8140 #35 0x68e7f2 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7523 #36 0x68f06a in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #37 0x694dce in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2398 #38 0x697238 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2311 #39 0x69e463 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2333 #40 0x69e463 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2465 #41 0x451404 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #42 0x742d97 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1409 #43 0x63f4c9 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8160 #44 0x68e7f2 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7523 #45 0x68f06a in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #46 0x694dce in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2398 #47 0x697238 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2311 #48 0x68f67d in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2333 #49 0x68f67d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1285 #50 0x714ead in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #51 0x715511 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #52 0x715654 in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1219 #53 0x7156a2 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1226 #54 0x41a7d8 in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #55 0x7f57d422950f in __libc_start_call_main (/lib64/libc.so.6+0x2950f) (BuildId: 8257ee907646e9b057197533d1e4ac8ede7a9c5c) #56 0x7f57d42295c8 in __libc_start_main_alias_2 (/lib64/libc.so.6+0x295c8) (BuildId: 8257ee907646e9b057197533d1e4ac8ede7a9c5c) #57 0x41d034 in _start (/data/gannet/ripley/R/gcc-SAN/bin/exec/R+0x41d034) (BuildId: 2066a1488f9f7902ee4e1b92fd9b3cdfa4e9bb35) fast_toolbox.cpp:693:55: runtime error: load of misaligned address 0x000000000001 for type 'type', which requires 8 byte alignment 0x000000000001: note: pointer points here #0 0x7f57c1972198 in sim_anneal_opt_cpp(Rcpp::Matrix<14, Rcpp::PreserveStorage>, double, int, double, double) /data/gannet/ripley/R/packages/tests-gcc-SAN/maxnodf/src/fast_toolbox.cpp:693 #1 0x7f57c1905d22 in _maxnodf_sim_anneal_opt_cpp /data/gannet/ripley/R/packages/tests-gcc-SAN/maxnodf/src/RcppExports.cpp:256 #2 0x58d0e9 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:766 #3 0x5958f7 in do_dotcall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:1437 #4 0x64de1f in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8140 #5 0x68e7f2 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7523 #6 0x68f06a in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #7 0x694dce in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2398 #8 0x697238 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2311 #9 0x68f67d in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2333 #10 0x68f67d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1285 #11 0x86e19a in R_DispatchOrEvalSP /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:657 #12 0x87df00 in do_subset3 /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:1264 #13 0x68faa8 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1237 #14 0x57b7b2 in do_External /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:573 #15 0x64de1f in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8140 #16 0x68e7f2 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7523 #17 0x68f06a in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x694dce in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2398 #19 0x697238 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2311 #20 0x68f67d in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2333 #21 0x68f67d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1285 #22 0x69985b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3009 #23 0x68faa8 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1237 #24 0x6a0fb2 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3955 #25 0x64de1f in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8140 #26 0x68e7f2 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7523 #27 0x68f06a in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #28 0x694dce in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2398 #29 0x697238 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2311 #30 0x68f67d in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2333 #31 0x68f67d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1285 #32 0x6a1e07 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3973 #33 0x64de1f in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8140 #34 0x68e7f2 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7523 #35 0x68f06a in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #36 0x694dce in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2398 #37 0x697238 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2311 #38 0x69e463 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2333 #39 0x69e463 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2465 #40 0x451404 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #41 0x742d97 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1409 #42 0x63f4c9 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8160 #43 0x68e7f2 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7523 #44 0x68f06a in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #45 0x694dce in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2398 #46 0x697238 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2311 #47 0x68f67d in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2333 #48 0x68f67d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1285 #49 0x714ead in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #50 0x715511 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #51 0x715654 in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1219 #52 0x7156a2 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1226 #53 0x41a7d8 in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #54 0x7f57d422950f in __libc_start_call_main (/lib64/libc.so.6+0x2950f) (BuildId: 8257ee907646e9b057197533d1e4ac8ede7a9c5c) #55 0x7f57d42295c8 in __libc_start_main_alias_2 (/lib64/libc.so.6+0x295c8) (BuildId: 8257ee907646e9b057197533d1e4ac8ede7a9c5c) #56 0x41d034 in _start (/data/gannet/ripley/R/gcc-SAN/bin/exec/R+0x41d034) (BuildId: 2066a1488f9f7902ee4e1b92fd9b3cdfa4e9bb35) *** caught segfault *** address 0x1, cause 'memory not mapped' Traceback: 1: sim_anneal_opt_cpp(mtx) 2: maxnodf(m, quality = 2) 3: eval_bare(expr, quo_get_env(quo)) 4: quasi_label(enquo(object), label, arg = "object") 5: expect_equal(maxnodf(m, quality = 2)$max_nodf, 0.9) 6: eval(code, test_env) 7: eval(code, test_env) 8: withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error) 9: doTryCatch(return(expr), name, parentenv, handler) 10: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 11: tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) 12: doTryCatch(return(expr), name, parentenv, handler) 13: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]]) 14: tryCatchList(expr, classes, parentenv, handlers) 15: tryCatch(withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error), error = handle_fatal, skip = function(e) { }) 16: test_code(desc, code, env = parent.frame(), default_reporter = local_interactive_reporter()) 17: test_that("maxnodf", { m <- matrix(0, 5, 5) diag(m) <- 1 m[1:2, ] <- 1 expect_equal(maxnodf(m, quality = 0)$max_nodf, 0.9) expect_equal(maxnodf(m, quality = 1)$max_nodf, 0.9) expect_equal(maxnodf(m, quality = 2)$max_nodf, 0.9) expect_equal(maxnodf(c(5, 5, 13), quality = 0)$max_nodf, 0.9)}) 18: eval(code, test_env) 19: eval(code, test_env) 20: withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error) 21: doTryCatch(return(expr), name, parentenv, handler) 22: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 23: tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) 24: doTryCatch(return(expr), name, parentenv, handler) 25: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]]) 26: tryCatchList(expr, classes, parentenv, handlers) 27: tryCatch(withCallingHandlers({ eval(code, test_env) if (!handled && !is.null(test)) { skip_empty() }}, expectation = handle_expectation, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error), error = handle_fatal, skip = function(e) { }) 28: test_code(test = NULL, code = exprs, env = env, default_reporter = StopReporter$new()) 29: source_file(path, env = env(env), desc = desc, error_call = error_call) 30: FUN(X[[i]], ...) 31: lapply(test_paths, test_one_file, env = env, desc = desc, error_call = error_call) 32: doTryCatch(return(expr), name, parentenv, handler) 33: tryCatchOne(expr, names, parentenv, handlers[[1L]]) 34: tryCatchList(expr, classes, parentenv, handlers) 35: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL}) 36: with_reporter(reporters$multi, lapply(test_paths, test_one_file, env = env, desc = desc, error_call = error_call)) 37: test_files_serial(test_dir = test_dir, test_package = test_package, test_paths = test_paths, load_helpers = load_helpers, reporter = reporter, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, desc = desc, load_package = load_package, error_call = error_call) 38: test_files(test_dir = path, test_paths = test_paths, test_package = package, reporter = reporter, load_helpers = load_helpers, env = env, stop_on_failure = stop_on_failure, stop_on_warning = stop_on_warning, load_package = load_package, parallel = parallel) 39: test_dir("testthat", package = package, reporter = reporter, ..., load_package = "installed") 40: test_check("maxnodf") An irrecoverable exception occurred. R is aborting now ...