R Under development (unstable) (2026-03-07 r89566) -- "Unsuffered Consequences" Copyright (C) 2026 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(N2R) Loading required package: Matrix > > testthat::test_check("N2R") creating space of type angular done adding data ... done building index ... n2/./include/n2/hnsw.h:117:22: runtime error: store to misaligned address 0x7e3a3b40c234 for type 'long unsigned int', which requires 8 byte alignment 0x7e3a3b40c234: note: pointer points here 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 ^ #0 0x7baa26ffe366 in char* n2::Hnsw::SetValueAndIncPtr(char*, unsigned long const&) n2/./include/n2/hnsw.h:117 #1 0x7baa26ffe366 in n2::Hnsw::SaveModelConfig(char*) n2/hnsw.cc:909 #2 0x7baa26fc7a3f in n2::Hnsw::Fit() n2/hnsw.cc:358 #3 0x7baa26e8d304 in n2Knn(Rcpp::Matrix<14, Rcpp::PreserveStorage> const&, long, long, bool, std::__cxx11::basic_string, std::allocator >, long, long, float, bool) /data/gannet/ripley/R/packages/tests-gcc-SAN/N2R/src/n2knn.cpp:54 #4 0x7baa26e41efc in _N2R_n2Knn /data/gannet/ripley/R/packages/tests-gcc-SAN/N2R/src/RcppExports.cpp:39 #5 0x000000751276 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:790 #6 0x000000755fca in do_dotcall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:1437 #7 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #8 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #9 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #10 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #11 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #12 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #13 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #14 0x00000088e554 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3679 #15 0x00000085f85c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #16 0x000000d041f7 in R_DispatchOrEvalSP /data/gannet/ripley/R/svn/R-devel/src/main/subassign.c:1550 #17 0x000000d427fd in do_subset /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:691 #18 0x00000085f496 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #19 0x00000073caea in do_External /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:573 #20 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #21 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #22 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #23 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #24 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #25 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #26 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #27 0x000000872f1b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2992 #28 0x00000085f496 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #29 0x000000894461 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3955 #30 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #31 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #32 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #34 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #35 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #36 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #37 0x000000895553 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3973 #38 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #39 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #40 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #42 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #43 0x00000087a027 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #44 0x00000087a027 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2456 #45 0x000000499ff6 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #46 0x000000a964b6 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #47 0x0000008de071 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8152 #48 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #49 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #50 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #51 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #52 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #53 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #54 0x000000a03788 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:264 #55 0x000000a03788 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #56 0x000000a11afa in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1235 #57 0x000000a11b92 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1242 #58 0x000000412fff in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #59 0x7faa3e412574 in __libc_start_call_main (/lib64/libc.so.6+0x3574) (BuildId: 92b5376d35bb29c098175948cf3e7cbcae3aeae1) #60 0x7faa3e412627 in __libc_start_main@GLIBC_2.2.5 (/lib64/libc.so.6+0x3627) (BuildId: 92b5376d35bb29c098175948cf3e7cbcae3aeae1) #61 0x0000004139e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x4139e4) (BuildId: 0d0c7651a222af8266574c99a8f48a7c5c2068c3) n2/./include/n2/hnsw.h:117:22: runtime error: store to misaligned address 0x7e3a3b40c23c for type 'long long int', which requires 8 byte alignment 0x7e3a3b40c23c: note: pointer points here 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 ^ #0 0x7baa26ffdc7c in char* n2::Hnsw::SetValueAndIncPtr(char*, long long const&) n2/./include/n2/hnsw.h:117 #1 0x7baa26ffdc7c in n2::Hnsw::SaveModelConfig(char*) n2/hnsw.cc:910 #2 0x7baa26fc7a3f in n2::Hnsw::Fit() n2/hnsw.cc:358 #3 0x7baa26e8d304 in n2Knn(Rcpp::Matrix<14, Rcpp::PreserveStorage> const&, long, long, bool, std::__cxx11::basic_string, std::allocator >, long, long, float, bool) /data/gannet/ripley/R/packages/tests-gcc-SAN/N2R/src/n2knn.cpp:54 #4 0x7baa26e41efc in _N2R_n2Knn /data/gannet/ripley/R/packages/tests-gcc-SAN/N2R/src/RcppExports.cpp:39 #5 0x000000751276 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:790 #6 0x000000755fca in do_dotcall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:1437 #7 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #8 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #9 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #10 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #11 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #12 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #13 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #14 0x00000088e554 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3679 #15 0x00000085f85c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #16 0x000000d041f7 in R_DispatchOrEvalSP /data/gannet/ripley/R/svn/R-devel/src/main/subassign.c:1550 #17 0x000000d427fd in do_subset /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:691 #18 0x00000085f496 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #19 0x00000073caea in do_External /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:573 #20 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #21 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #22 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #23 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #24 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #25 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #26 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #27 0x000000872f1b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2992 #28 0x00000085f496 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #29 0x000000894461 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3955 #30 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #31 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #32 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #34 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #35 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #36 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #37 0x000000895553 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3973 #38 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #39 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #40 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #42 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #43 0x00000087a027 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #44 0x00000087a027 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2456 #45 0x000000499ff6 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #46 0x000000a964b6 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #47 0x0000008de071 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8152 #48 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #49 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #50 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #51 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #52 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #53 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #54 0x000000a03788 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:264 #55 0x000000a03788 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #56 0x000000a11afa in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1235 #57 0x000000a11b92 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1242 #58 0x000000412fff in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #59 0x7faa3e412574 in __libc_start_call_main (/lib64/libc.so.6+0x3574) (BuildId: 92b5376d35bb29c098175948cf3e7cbcae3aeae1) #60 0x7faa3e412627 in __libc_start_main@GLIBC_2.2.5 (/lib64/libc.so.6+0x3627) (BuildId: 92b5376d35bb29c098175948cf3e7cbcae3aeae1) #61 0x0000004139e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x4139e4) (BuildId: 0d0c7651a222af8266574c99a8f48a7c5c2068c3) n2/./include/n2/hnsw.h:117:22: runtime error: store to misaligned address 0x7e3a3b40c244 for type 'long long int', which requires 8 byte alignment 0x7e3a3b40c244: note: pointer points here 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 ^ #0 0x7baa26ffdb2c in char* n2::Hnsw::SetValueAndIncPtr(char*, long long const&) n2/./include/n2/hnsw.h:117 #1 0x7baa26ffdb2c in n2::Hnsw::SaveModelConfig(char*) n2/hnsw.cc:911 #2 0x7baa26fc7a3f in n2::Hnsw::Fit() n2/hnsw.cc:358 #3 0x7baa26e8d304 in n2Knn(Rcpp::Matrix<14, Rcpp::PreserveStorage> const&, long, long, bool, std::__cxx11::basic_string, std::allocator >, long, long, float, bool) /data/gannet/ripley/R/packages/tests-gcc-SAN/N2R/src/n2knn.cpp:54 #4 0x7baa26e41efc in _N2R_n2Knn /data/gannet/ripley/R/packages/tests-gcc-SAN/N2R/src/RcppExports.cpp:39 #5 0x000000751276 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:790 #6 0x000000755fca in do_dotcall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:1437 #7 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #8 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #9 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #10 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #11 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #12 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #13 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #14 0x00000088e554 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3679 #15 0x00000085f85c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #16 0x000000d041f7 in R_DispatchOrEvalSP /data/gannet/ripley/R/svn/R-devel/src/main/subassign.c:1550 #17 0x000000d427fd in do_subset /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:691 #18 0x00000085f496 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #19 0x00000073caea in do_External /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:573 #20 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #21 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #22 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #23 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #24 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #25 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #26 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #27 0x000000872f1b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2992 #28 0x00000085f496 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #29 0x000000894461 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3955 #30 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #31 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #32 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #34 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #35 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #36 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #37 0x000000895553 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3973 #38 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #39 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #40 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #42 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #43 0x00000087a027 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #44 0x00000087a027 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2456 #45 0x000000499ff6 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #46 0x000000a964b6 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #47 0x0000008de071 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8152 #48 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #49 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #50 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #51 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #52 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #53 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #54 0x000000a03788 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:264 #55 0x000000a03788 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #56 0x000000a11afa in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1235 #57 0x000000a11b92 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1242 #58 0x000000412fff in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #59 0x7faa3e412574 in __libc_start_call_main (/lib64/libc.so.6+0x3574) (BuildId: 92b5376d35bb29c098175948cf3e7cbcae3aeae1) #60 0x7faa3e412627 in __libc_start_main@GLIBC_2.2.5 (/lib64/libc.so.6+0x3627) (BuildId: 92b5376d35bb29c098175948cf3e7cbcae3aeae1) #61 0x0000004139e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x4139e4) (BuildId: 0d0c7651a222af8266574c99a8f48a7c5c2068c3) n2/./include/n2/hnsw.h:117:22: runtime error: store to misaligned address 0x7e3a3b40c24c for type 'long long int', which requires 8 byte alignment 0x7e3a3b40c24c: note: pointer points here 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 ^ #0 0x7baa26ffdf2c in char* n2::Hnsw::SetValueAndIncPtr(char*, long long const&) n2/./include/n2/hnsw.h:117 #1 0x7baa26ffdf2c in n2::Hnsw::SaveModelConfig(char*) n2/hnsw.cc:912 #2 0x7baa26fc7a3f in n2::Hnsw::Fit() n2/hnsw.cc:358 #3 0x7baa26e8d304 in n2Knn(Rcpp::Matrix<14, Rcpp::PreserveStorage> const&, long, long, bool, std::__cxx11::basic_string, std::allocator >, long, long, float, bool) /data/gannet/ripley/R/packages/tests-gcc-SAN/N2R/src/n2knn.cpp:54 #4 0x7baa26e41efc in _N2R_n2Knn /data/gannet/ripley/R/packages/tests-gcc-SAN/N2R/src/RcppExports.cpp:39 #5 0x000000751276 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:790 #6 0x000000755fca in do_dotcall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:1437 #7 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #8 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #9 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #10 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #11 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #12 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #13 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #14 0x00000088e554 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3679 #15 0x00000085f85c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #16 0x000000d041f7 in R_DispatchOrEvalSP /data/gannet/ripley/R/svn/R-devel/src/main/subassign.c:1550 #17 0x000000d427fd in do_subset /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:691 #18 0x00000085f496 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #19 0x00000073caea in do_External /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:573 #20 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #21 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #22 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #23 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #24 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #25 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #26 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #27 0x000000872f1b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2992 #28 0x00000085f496 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #29 0x000000894461 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3955 #30 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #31 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #32 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #34 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #35 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #36 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #37 0x000000895553 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3973 #38 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #39 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #40 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #42 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #43 0x00000087a027 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #44 0x00000087a027 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2456 #45 0x000000499ff6 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #46 0x000000a964b6 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #47 0x0000008de071 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8152 #48 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #49 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #50 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #51 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #52 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #53 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #54 0x000000a03788 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:264 #55 0x000000a03788 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #56 0x000000a11afa in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1235 #57 0x000000a11b92 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1242 #58 0x000000412fff in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #59 0x7faa3e412574 in __libc_start_call_main (/lib64/libc.so.6+0x3574) (BuildId: 92b5376d35bb29c098175948cf3e7cbcae3aeae1) #60 0x7faa3e412627 in __libc_start_main@GLIBC_2.2.5 (/lib64/libc.so.6+0x3627) (BuildId: 92b5376d35bb29c098175948cf3e7cbcae3aeae1) #61 0x0000004139e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x4139e4) (BuildId: 0d0c7651a222af8266574c99a8f48a7c5c2068c3) n2/./include/n2/hnsw.h:117:22: runtime error: store to misaligned address 0x7e3a3b40c254 for type 'long long int', which requires 8 byte alignment 0x7e3a3b40c254: note: pointer points here 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 ^ #0 0x7baa26ffdddc in char* n2::Hnsw::SetValueAndIncPtr(char*, long long const&) n2/./include/n2/hnsw.h:117 #1 0x7baa26ffdddc in n2::Hnsw::SaveModelConfig(char*) n2/hnsw.cc:913 #2 0x7baa26fc7a3f in n2::Hnsw::Fit() n2/hnsw.cc:358 #3 0x7baa26e8d304 in n2Knn(Rcpp::Matrix<14, Rcpp::PreserveStorage> const&, long, long, bool, std::__cxx11::basic_string, std::allocator >, long, long, float, bool) /data/gannet/ripley/R/packages/tests-gcc-SAN/N2R/src/n2knn.cpp:54 #4 0x7baa26e41efc in _N2R_n2Knn /data/gannet/ripley/R/packages/tests-gcc-SAN/N2R/src/RcppExports.cpp:39 #5 0x000000751276 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:790 #6 0x000000755fca in do_dotcall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:1437 #7 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #8 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #9 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #10 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #11 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #12 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #13 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #14 0x00000088e554 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3679 #15 0x00000085f85c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #16 0x000000d041f7 in R_DispatchOrEvalSP /data/gannet/ripley/R/svn/R-devel/src/main/subassign.c:1550 #17 0x000000d427fd in do_subset /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:691 #18 0x00000085f496 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #19 0x00000073caea in do_External /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:573 #20 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #21 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #22 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #23 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #24 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #25 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #26 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #27 0x000000872f1b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2992 #28 0x00000085f496 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #29 0x000000894461 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3955 #30 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #31 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #32 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #34 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #35 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #36 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #37 0x000000895553 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3973 #38 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #39 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #40 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #42 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #43 0x00000087a027 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #44 0x00000087a027 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2456 #45 0x000000499ff6 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #46 0x000000a964b6 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #47 0x0000008de071 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8152 #48 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #49 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #50 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #51 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #52 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #53 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #54 0x000000a03788 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:264 #55 0x000000a03788 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #56 0x000000a11afa in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1235 #57 0x000000a11b92 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1242 #58 0x000000412fff in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #59 0x7faa3e412574 in __libc_start_call_main (/lib64/libc.so.6+0x3574) (BuildId: 92b5376d35bb29c098175948cf3e7cbcae3aeae1) #60 0x7faa3e412627 in __libc_start_main@GLIBC_2.2.5 (/lib64/libc.so.6+0x3627) (BuildId: 92b5376d35bb29c098175948cf3e7cbcae3aeae1) #61 0x0000004139e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x4139e4) (BuildId: 0d0c7651a222af8266574c99a8f48a7c5c2068c3) n2/./include/n2/hnsw.h:117:22: runtime error: store to misaligned address 0x7e3a3b40c25c for type 'long long int', which requires 8 byte alignment 0x7e3a3b40c25c: note: pointer points here 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 ^ #0 0x7baa26ffe9e9 in char* n2::Hnsw::SetValueAndIncPtr(char*, long long const&) n2/./include/n2/hnsw.h:117 #1 0x7baa26ffe9e9 in n2::Hnsw::SaveModelConfig(char*) n2/hnsw.cc:914 #2 0x7baa26fc7a3f in n2::Hnsw::Fit() n2/hnsw.cc:358 #3 0x7baa26e8d304 in n2Knn(Rcpp::Matrix<14, Rcpp::PreserveStorage> const&, long, long, bool, std::__cxx11::basic_string, std::allocator >, long, long, float, bool) /data/gannet/ripley/R/packages/tests-gcc-SAN/N2R/src/n2knn.cpp:54 #4 0x7baa26e41efc in _N2R_n2Knn /data/gannet/ripley/R/packages/tests-gcc-SAN/N2R/src/RcppExports.cpp:39 #5 0x000000751276 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:790 #6 0x000000755fca in do_dotcall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:1437 #7 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #8 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #9 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #10 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #11 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #12 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #13 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #14 0x00000088e554 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3679 #15 0x00000085f85c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #16 0x000000d041f7 in R_DispatchOrEvalSP /data/gannet/ripley/R/svn/R-devel/src/main/subassign.c:1550 #17 0x000000d427fd in do_subset /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:691 #18 0x00000085f496 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #19 0x00000073caea in do_External /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:573 #20 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #21 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #22 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #23 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #24 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #25 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #26 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #27 0x000000872f1b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2992 #28 0x00000085f496 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #29 0x000000894461 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3955 #30 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #31 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #32 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #34 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #35 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #36 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #37 0x000000895553 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3973 #38 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #39 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #40 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #42 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #43 0x00000087a027 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #44 0x00000087a027 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2456 #45 0x000000499ff6 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #46 0x000000a964b6 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #47 0x0000008de071 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8152 #48 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #49 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #50 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #51 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #52 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #53 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #54 0x000000a03788 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:264 #55 0x000000a03788 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #56 0x000000a11afa in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1235 #57 0x000000a11b92 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1242 #58 0x000000412fff in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #59 0x7faa3e412574 in __libc_start_call_main (/lib64/libc.so.6+0x3574) (BuildId: 92b5376d35bb29c098175948cf3e7cbcae3aeae1) #60 0x7faa3e412627 in __libc_start_main@GLIBC_2.2.5 (/lib64/libc.so.6+0x3627) (BuildId: 92b5376d35bb29c098175948cf3e7cbcae3aeae1) #61 0x0000004139e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x4139e4) (BuildId: 0d0c7651a222af8266574c99a8f48a7c5c2068c3) n2/./include/n2/hnsw.h:117:22: runtime error: store to misaligned address 0x7e3a3b40c264 for type 'long long int', which requires 8 byte alignment 0x7e3a3b40c264: note: pointer points here 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 ^ #0 0x7baa26ffe04c in char* n2::Hnsw::SetValueAndIncPtr(char*, long long const&) n2/./include/n2/hnsw.h:117 #1 0x7baa26ffe04c in n2::Hnsw::SaveModelConfig(char*) n2/hnsw.cc:915 #2 0x7baa26fc7a3f in n2::Hnsw::Fit() n2/hnsw.cc:358 #3 0x7baa26e8d304 in n2Knn(Rcpp::Matrix<14, Rcpp::PreserveStorage> const&, long, long, bool, std::__cxx11::basic_string, std::allocator >, long, long, float, bool) /data/gannet/ripley/R/packages/tests-gcc-SAN/N2R/src/n2knn.cpp:54 #4 0x7baa26e41efc in _N2R_n2Knn /data/gannet/ripley/R/packages/tests-gcc-SAN/N2R/src/RcppExports.cpp:39 #5 0x000000751276 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:790 #6 0x000000755fca in do_dotcall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:1437 #7 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #8 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #9 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #10 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #11 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #12 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #13 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #14 0x00000088e554 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3679 #15 0x00000085f85c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #16 0x000000d041f7 in R_DispatchOrEvalSP /data/gannet/ripley/R/svn/R-devel/src/main/subassign.c:1550 #17 0x000000d427fd in do_subset /data/gannet/ripley/R/svn/R-devel/src/main/subset.c:691 #18 0x00000085f496 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #19 0x00000073caea in do_External /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:573 #20 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #21 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #22 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #23 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #24 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #25 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #26 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #27 0x000000872f1b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2992 #28 0x00000085f496 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #29 0x000000894461 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3955 #30 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #31 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #32 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #34 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #35 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #36 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #37 0x000000895553 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3973 #38 0x0000008d0e62 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8132 #39 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #40 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #42 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #43 0x00000087a027 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #44 0x00000087a027 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2456 #45 0x000000499ff6 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #46 0x000000a964b6 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #47 0x0000008de071 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8152 #48 0x0000008be0ab in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7515 #49 0x00000085e9d2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #50 0x00000087471a in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2389 #51 0x00000087870a in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2302 #52 0x00000085f073 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2324 #53 0x00000085f073 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #54 0x000000a03788 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:264 #55 0x000000a03788 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #56 0x000000a11afa in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1235 #57 0x000000a11b92 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1242 #58 0x000000412fff in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #59 0x7faa3e412574 in __libc_start_call_main (/lib64/libc.so.6+0x3574) (BuildId: 92b5376d35bb29c098175948cf3e7cbcae3aeae1) #60 0x7faa3e412627 in __libc_start_main@GLIBC_2.2.5 (/lib64/libc.so.6+0x3627) (BuildId: 92b5376d35bb29c098175948cf3e7cbcae3aeae1) #61 0x0000004139e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x4139e4) (BuildId: 0d0c7651a222af8266574c99a8f48a7c5c2068c3) done querying ... done creating space of type angular done adding data ... done building index ... done querying ... done creating space of type angular done adding data ... done building index ... done querying ... done creating space of type angular done adding data ... done building index ... done querying ... done [ FAIL 0 | WARN 0 | SKIP 0 | PASS 6 ] > > proc.time() user system elapsed 15.980 0.778 18.206