--- re-building ‘mega2rtutorial.Rmd’ using rmarkdown vendor/sqlite3/sqlite3.c:111455:20: runtime error: index 2 out of bounds for type 'ExprList_item [1]' #0 0x7f5e524ab741 in sqlite3ExprListAppend vendor/sqlite3/sqlite3.c:111455 #1 0x7f5e526014c8 in selectExpander vendor/sqlite3/sqlite3.c:150034 #2 0x7f5e524760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #3 0x7f5e5260946f in sqlite3SelectExpand vendor/sqlite3/sqlite3.c:150132 #4 0x7f5e5260946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150214 #5 0x7f5e5260946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #6 0x7f5e526181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #7 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #8 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #9 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #10 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #11 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #12 0x7f5e5258a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #13 0x7f5e5258a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #14 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #15 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #16 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #17 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #18 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #19 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #20 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #21 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #22 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #23 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #24 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #25 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #26 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #27 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #28 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #29 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #30 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #31 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #36 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #37 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #38 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #39 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #40 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #41 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #42 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #43 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #44 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #45 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #46 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #47 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #48 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #49 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #54 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #55 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #56 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #57 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #58 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #59 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #62 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #63 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #68 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #69 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #70 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #71 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #72 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #73 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #74 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #75 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #76 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #77 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #81 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #82 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #83 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #84 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #88 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #89 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #90 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #93 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #94 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #102 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #103 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #104 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #105 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #114 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #115 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #116 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #117 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #118 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #119 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #120 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #121 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #122 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #123 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #124 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #125 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #126 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #127 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #128 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #129 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #130 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #131 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #132 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #133 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #134 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #135 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #136 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #137 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #138 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #139 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #140 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #141 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #142 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #143 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #144 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #145 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #146 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #147 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #148 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #149 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #150 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #151 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #152 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #153 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #154 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #155 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #156 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #157 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #158 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #159 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #160 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #161 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #162 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #163 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #164 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #165 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #166 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #167 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #168 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #169 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #170 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #171 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #172 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #173 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:150038:26: runtime error: index 2 out of bounds for type 'ExprList_item [1]' #0 0x7f5e526034c7 in selectExpander vendor/sqlite3/sqlite3.c:150038 #1 0x7f5e524760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #2 0x7f5e5260946f in sqlite3SelectExpand vendor/sqlite3/sqlite3.c:150132 #3 0x7f5e5260946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150214 #4 0x7f5e5260946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #5 0x7f5e526181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #6 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #7 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #8 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #9 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #10 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #11 0x7f5e5258a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #12 0x7f5e5258a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #13 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #14 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #15 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #16 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #17 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #18 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #19 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #20 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #21 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #22 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #23 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #24 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #25 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #26 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #27 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #28 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #29 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #30 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #35 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #36 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #37 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #38 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #39 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #40 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #41 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #42 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #43 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #44 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #45 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #46 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #47 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #48 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #49 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #50 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #51 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #52 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #53 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #54 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #55 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #56 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #57 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #58 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #59 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #60 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #61 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #62 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #63 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #64 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #65 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #66 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #67 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #68 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #69 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #70 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #71 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #72 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #73 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #74 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #75 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #76 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #80 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #81 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #82 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #83 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #87 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #88 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #89 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #90 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #91 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #92 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #93 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #94 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #95 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #96 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #97 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #98 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #99 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #100 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #101 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #102 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #103 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #104 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #113 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #114 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #115 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #116 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #117 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #118 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #119 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #120 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #121 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #122 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #123 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #124 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #125 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #126 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #127 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #128 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #129 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #130 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #131 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #132 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #133 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #134 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #135 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #136 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #137 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #138 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #139 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #140 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #141 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #142 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #143 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #144 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #145 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #146 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #147 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #148 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #149 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #150 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #151 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #152 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #153 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #154 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #155 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #156 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #157 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #158 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #159 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #160 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #161 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #162 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #163 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #164 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #165 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #166 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #167 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #168 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #169 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #170 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #171 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #172 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:111438:20: runtime error: index 4 out of bounds for type 'ExprList_item [1]' #0 0x7f5e524ab2e3 in sqlite3ExprListAppendGrow vendor/sqlite3/sqlite3.c:111438 #1 0x7f5e526014c8 in selectExpander vendor/sqlite3/sqlite3.c:150034 #2 0x7f5e524760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #3 0x7f5e5260946f in sqlite3SelectExpand vendor/sqlite3/sqlite3.c:150132 #4 0x7f5e5260946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150214 #5 0x7f5e5260946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #6 0x7f5e526181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #7 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #8 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #9 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #10 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #11 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #12 0x7f5e5258a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #13 0x7f5e5258a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #14 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #15 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #16 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #17 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #18 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #19 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #20 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #21 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #22 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #23 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #24 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #25 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #26 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #27 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #28 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #29 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #30 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #31 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #36 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #37 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #38 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #39 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #40 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #41 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #42 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #43 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #44 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #45 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #46 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #47 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #48 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #49 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #54 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #55 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #56 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #57 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #58 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #59 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #62 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #63 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #68 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #69 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #70 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #71 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #72 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #73 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #74 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #75 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #76 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #77 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #81 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #82 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #83 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #84 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #88 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #89 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #90 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #93 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #94 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #102 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #103 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #104 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #105 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #114 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #115 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #116 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #117 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #118 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #119 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #120 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #121 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #122 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #123 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #124 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #125 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #126 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #127 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #128 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #129 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #130 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #131 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #132 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #133 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #134 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #135 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #136 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #137 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #138 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #139 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #140 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #141 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #142 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #143 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #144 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #145 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #146 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #147 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #148 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #149 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #150 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #151 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #152 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #153 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #154 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #155 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #156 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #157 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #158 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #159 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #160 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #161 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #162 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #163 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #164 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #165 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #166 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #167 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #168 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #169 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #170 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #171 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #172 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #173 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:109277:27: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e52484a9c in sqlite3ResolveExprListNames vendor/sqlite3/sqlite3.c:109277 #1 0x7f5e524a53a1 in resolveSelectStep vendor/sqlite3/sqlite3.c:109027 #2 0x7f5e524760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #3 0x7f5e526095d3 in sqlite3ResolveSelectNames vendor/sqlite3/sqlite3.c:109330 #4 0x7f5e526095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150216 #5 0x7f5e526095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #6 0x7f5e526181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #7 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #8 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #9 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #10 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #11 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #12 0x7f5e5258a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #13 0x7f5e5258a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #14 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #15 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #16 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #17 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #18 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #19 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #20 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #21 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #22 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #23 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #24 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #25 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #26 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #27 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #28 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #29 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #30 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #31 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #36 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #37 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #38 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #39 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #40 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #41 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #42 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #43 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #44 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #45 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #46 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #47 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #48 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #49 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #54 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #55 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #56 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #57 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #58 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #59 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #62 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #63 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #68 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #69 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #70 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #71 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #72 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #73 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #74 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #75 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #76 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #77 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #81 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #82 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #83 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #84 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #88 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #89 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #90 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #93 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #94 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #102 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #103 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #104 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #105 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #114 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #115 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #116 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #117 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #118 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #119 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #120 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #121 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #122 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #123 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #124 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #125 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #126 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #127 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #128 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #129 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #130 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #131 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #132 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #133 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #134 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #135 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #136 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #137 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #138 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #139 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #140 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #141 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #142 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #143 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #144 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #145 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #146 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #147 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #148 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #149 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #150 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #151 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #152 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #153 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #154 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #155 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #156 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #157 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #158 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #159 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #160 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #161 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #162 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #163 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #164 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #165 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #166 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #167 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #168 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #169 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #170 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #171 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #172 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #173 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:108558:20: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e52482bb7 in resolveAsName vendor/sqlite3/sqlite3.c:108558 #1 0x7f5e52486e11 in resolveOrderGroupBy vendor/sqlite3/sqlite3.c:108872 #2 0x7f5e524a6408 in resolveSelectStep vendor/sqlite3/sqlite3.c:109120 #3 0x7f5e524760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #4 0x7f5e526095d3 in sqlite3ResolveSelectNames vendor/sqlite3/sqlite3.c:109330 #5 0x7f5e526095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150216 #6 0x7f5e526095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #7 0x7f5e526181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #8 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #9 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #10 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #11 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #12 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #13 0x7f5e5258a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #14 0x7f5e5258a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #15 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #16 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #17 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #18 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #19 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #20 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #21 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #22 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #23 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #24 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #25 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #26 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #27 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #28 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #29 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #30 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #31 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #32 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #33 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #34 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #35 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #36 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #37 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #38 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #39 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #40 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #41 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #42 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #43 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #44 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #45 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #46 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #47 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #48 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #49 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #50 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #55 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #56 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #57 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #58 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #59 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #60 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #63 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #64 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #69 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #70 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #71 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #72 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #73 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #74 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #75 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #76 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #77 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #78 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #79 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #80 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #81 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #82 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #83 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #84 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #85 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #86 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #87 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #88 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #89 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #90 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #91 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #92 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #93 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #94 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #95 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #96 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #97 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #98 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #99 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #100 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #101 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #102 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #103 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #104 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #105 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #106 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #111 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #112 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #113 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #114 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #115 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #116 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #117 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #118 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #119 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #120 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #121 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #122 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #123 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #124 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #125 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #126 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #127 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #128 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #129 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #130 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #131 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #132 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #133 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #134 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #135 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #136 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #137 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #138 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #139 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #140 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #141 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #142 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #143 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #144 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #145 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #146 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #147 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #148 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #149 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #150 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #151 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #152 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #153 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #154 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #155 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #156 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #157 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #158 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #159 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #160 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #161 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #162 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #163 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #164 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #165 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #166 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #167 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #168 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #169 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #170 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #171 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #172 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #173 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #174 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:108559:36: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e52482bf3 in resolveAsName vendor/sqlite3/sqlite3.c:108559 #1 0x7f5e52486e11 in resolveOrderGroupBy vendor/sqlite3/sqlite3.c:108872 #2 0x7f5e524a6408 in resolveSelectStep vendor/sqlite3/sqlite3.c:109120 #3 0x7f5e524760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #4 0x7f5e526095d3 in sqlite3ResolveSelectNames vendor/sqlite3/sqlite3.c:109330 #5 0x7f5e526095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150216 #6 0x7f5e526095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #7 0x7f5e526181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #8 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #9 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #10 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #11 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #12 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #13 0x7f5e5258a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #14 0x7f5e5258a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #15 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #16 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #17 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #18 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #19 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #20 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #21 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #22 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #23 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #24 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #25 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #26 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #27 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #28 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #29 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #30 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #31 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #32 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #33 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #34 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #35 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #36 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #37 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #38 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #39 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #40 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #41 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #42 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #43 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #44 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #45 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #46 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #47 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #48 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #49 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #50 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #55 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #56 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #57 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #58 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #59 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #60 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #63 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #64 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #69 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #70 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #71 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #72 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #73 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #74 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #75 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #76 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #77 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #78 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #79 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #80 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #81 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #82 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #83 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #84 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #85 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #86 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #87 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #88 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #89 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #90 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #91 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #92 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #93 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #94 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #95 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #96 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #97 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #98 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #99 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #100 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #101 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #102 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #103 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #104 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #105 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #106 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #111 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #112 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #113 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #114 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #115 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #116 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #117 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #118 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #119 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #120 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #121 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #122 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #123 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #124 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #125 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #126 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #127 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #128 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #129 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #130 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #131 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #132 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #133 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #134 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #135 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #136 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #137 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #138 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #139 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #140 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #141 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #142 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #143 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #144 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #145 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #146 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #147 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #148 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #149 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #150 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #151 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #152 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #153 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #154 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #155 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #156 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #157 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #158 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #159 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #160 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #161 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #162 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #163 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #164 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #165 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #166 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #167 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #168 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #169 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #170 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #171 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #172 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #173 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #174 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:108900:55: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e5248755c in resolveOrderGroupBy vendor/sqlite3/sqlite3.c:108900 #1 0x7f5e524a6408 in resolveSelectStep vendor/sqlite3/sqlite3.c:109120 #2 0x7f5e524760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #3 0x7f5e526095d3 in sqlite3ResolveSelectNames vendor/sqlite3/sqlite3.c:109330 #4 0x7f5e526095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150216 #5 0x7f5e526095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #6 0x7f5e526181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #7 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #8 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #9 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #10 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #11 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #12 0x7f5e5258a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #13 0x7f5e5258a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #14 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #15 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #16 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #17 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #18 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #19 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #20 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #21 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #22 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #23 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #24 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #25 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #26 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #27 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #28 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #29 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #30 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #31 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #36 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #37 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #38 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #39 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #40 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #41 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #42 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #43 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #44 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #45 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #46 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #47 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #48 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #49 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #54 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #55 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #56 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #57 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #58 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #59 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #62 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #63 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #68 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #69 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #70 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #71 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #72 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #73 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #74 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #75 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #76 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #77 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #81 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #82 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #83 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #84 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #88 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #89 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #90 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #93 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #94 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #102 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #103 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #104 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #105 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #114 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #115 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #116 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #117 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #118 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #119 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #120 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #121 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #122 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #123 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #124 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #125 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #126 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #127 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #128 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #129 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #130 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #131 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #132 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #133 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #134 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #135 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #136 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #137 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #138 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #139 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #140 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #141 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #142 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #143 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #144 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #145 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #146 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #147 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #148 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #149 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #150 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #151 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #152 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #153 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #154 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #155 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #156 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #157 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #158 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #159 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #160 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #161 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #162 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #163 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #164 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #165 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #166 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #167 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #168 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #169 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #170 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #171 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #172 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #173 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:145839:24: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e525d9fee in sqlite3GenerateColumnNames vendor/sqlite3/sqlite3.c:145839 #1 0x7f5e526194f6 in sqlite3Select vendor/sqlite3/sqlite3.c:151190 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e5258a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e5258a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #9 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #10 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #11 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #12 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #13 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #14 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #15 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #16 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #17 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #18 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #19 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #20 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #21 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #22 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #23 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #24 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #25 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #26 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #31 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #32 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #33 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #34 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #35 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #36 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #37 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #42 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #43 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #44 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #45 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #46 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #51 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #52 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #53 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #54 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #57 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #58 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #70 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #71 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #72 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #73 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #74 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #75 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #76 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #77 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #78 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #79 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #83 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #84 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #85 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #88 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #89 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #93 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #94 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #95 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #96 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #97 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #98 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #99 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #100 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #105 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #106 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #109 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #110 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #111 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #112 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #113 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #114 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #115 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #116 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #117 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #118 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #119 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #120 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #121 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #122 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #123 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #124 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #125 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #126 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #127 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #128 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #129 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #130 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #131 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #132 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #133 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #134 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #135 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #136 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #137 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #138 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #139 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #140 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #141 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #142 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #143 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #144 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #145 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #146 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #147 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #148 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #149 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #150 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #151 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #152 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #153 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #154 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #155 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #156 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #157 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #158 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #159 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #160 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #161 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #162 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #163 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #164 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #165 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #166 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #167 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #168 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:145845:18: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e525d9e7f in sqlite3GenerateColumnNames vendor/sqlite3/sqlite3.c:145845 #1 0x7f5e526194f6 in sqlite3Select vendor/sqlite3/sqlite3.c:151190 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e5258a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e5258a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #9 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #10 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #11 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #12 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #13 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #14 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #15 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #16 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #17 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #18 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #19 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #20 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #21 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #22 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #23 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #24 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #25 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #26 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #31 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #32 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #33 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #34 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #35 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #36 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #37 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #42 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #43 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #44 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #45 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #46 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #51 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #52 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #53 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #54 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #57 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #58 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #70 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #71 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #72 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #73 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #74 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #75 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #76 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #77 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #78 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #79 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #83 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #84 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #85 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #88 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #89 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #93 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #94 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #95 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #96 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #97 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #98 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #99 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #100 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #105 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #106 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #109 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #110 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #111 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #112 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #113 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #114 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #115 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #116 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #117 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #118 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #119 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #120 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #121 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #122 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #123 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #124 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #125 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #126 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #127 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #128 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #129 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #130 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #131 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #132 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #133 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #134 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #135 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #136 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #137 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #138 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #139 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #140 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #141 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #142 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #143 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #144 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #145 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #146 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #147 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #148 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #149 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #150 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #151 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #152 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #153 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #154 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #155 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #156 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #157 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #158 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #159 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #160 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #161 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #162 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #163 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #164 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #165 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #166 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #167 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #168 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:145845:41: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e525da06a in sqlite3GenerateColumnNames vendor/sqlite3/sqlite3.c:145845 #1 0x7f5e526194f6 in sqlite3Select vendor/sqlite3/sqlite3.c:151190 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e5258a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e5258a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #9 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #10 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #11 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #12 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #13 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #14 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #15 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #16 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #17 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #18 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #19 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #20 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #21 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #22 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #23 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #24 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #25 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #26 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #31 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #32 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #33 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #34 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #35 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #36 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #37 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #42 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #43 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #44 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #45 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #46 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #51 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #52 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #53 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #54 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #57 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #58 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #70 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #71 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #72 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #73 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #74 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #75 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #76 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #77 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #78 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #79 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #83 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #84 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #85 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #88 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #89 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #93 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #94 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #95 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #96 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #97 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #98 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #99 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #100 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #105 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #106 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #109 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #110 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #111 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #112 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #113 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #114 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #115 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #116 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #117 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #118 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #119 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #120 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #121 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #122 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #123 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #124 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #125 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #126 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #127 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #128 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #129 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #130 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #131 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #132 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #133 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #134 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #135 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #136 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #137 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #138 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #139 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #140 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #141 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #142 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #143 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #144 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #145 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #146 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #147 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #148 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #149 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #150 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #151 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #152 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #153 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #154 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #155 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #156 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #157 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #158 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #159 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #160 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #161 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #162 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #163 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #164 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #165 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #166 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #167 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #168 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:145847:30: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e525da718 in sqlite3GenerateColumnNames vendor/sqlite3/sqlite3.c:145847 #1 0x7f5e526194f6 in sqlite3Select vendor/sqlite3/sqlite3.c:151190 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e5258a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e5258a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #9 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #10 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #11 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #12 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #13 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #14 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #15 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #16 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #17 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #18 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #19 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #20 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #21 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #22 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #23 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #24 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #25 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #26 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #31 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #32 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #33 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #34 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #35 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #36 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #37 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #42 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #43 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #44 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #45 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #46 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #51 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #52 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #53 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #54 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #57 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #58 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #70 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #71 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #72 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #73 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #74 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #75 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #76 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #77 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #78 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #79 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #83 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #84 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #85 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #88 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #89 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #93 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #94 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #95 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #96 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #97 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #98 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #99 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #100 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #105 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #106 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #109 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #110 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #111 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #112 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #113 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #114 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #115 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #116 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #117 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #118 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #119 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #120 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #121 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #122 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #123 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #124 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #125 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #126 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #127 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #128 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #129 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #130 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #131 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #132 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #133 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #134 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #135 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #136 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #137 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #138 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #139 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #140 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #141 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #142 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #143 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #144 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #145 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #146 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #147 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #148 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #149 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #150 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #151 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #152 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #153 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #154 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #155 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #156 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #157 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #158 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #159 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #160 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #161 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #162 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #163 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #164 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #165 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #166 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #167 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #168 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:145759:24: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e525d9f95 in generateColumnTypes vendor/sqlite3/sqlite3.c:145759 #1 0x7f5e525d9f95 in sqlite3GenerateColumnNames vendor/sqlite3/sqlite3.c:145874 #2 0x7f5e526194f6 in sqlite3Select vendor/sqlite3/sqlite3.c:151190 #3 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e5258a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e5258a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #10 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #11 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #12 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #13 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #14 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #15 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #16 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #17 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #18 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #19 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #20 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #21 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #22 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #23 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #24 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #25 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #26 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #27 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #28 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #29 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #30 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #31 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #32 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #33 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #34 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #35 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #36 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #37 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #38 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #43 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #44 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #45 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #46 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #47 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #52 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #53 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #54 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #55 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #56 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #57 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #58 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #59 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #64 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #65 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #66 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #70 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #71 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #72 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #73 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #74 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #75 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #76 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #77 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #78 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #79 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #80 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #81 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #82 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #83 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #84 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #85 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #86 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #98 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #99 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #100 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #101 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #106 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #107 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #108 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #109 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #110 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #111 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #112 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #113 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #114 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #115 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #116 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #117 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #118 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #119 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #120 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #121 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #122 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #123 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #124 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #125 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #126 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #127 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #128 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #129 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #130 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #131 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #132 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #133 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #134 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #135 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #136 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #137 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #138 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #139 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #140 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #141 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #142 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #143 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #144 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #145 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #146 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #147 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #148 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #149 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #150 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #151 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #152 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #153 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #154 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #155 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #156 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #157 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #158 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #159 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #160 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #161 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #162 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #163 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #164 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #165 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #166 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #167 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #168 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #169 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:145214:35: runtime error: index 7 out of bounds for type 'CollSeq *[1]' #0 0x7f5e525d0ef8 in sqlite3KeyInfoAlloc vendor/sqlite3/sqlite3.c:145214 #1 0x7f5e525d1e09 in sqlite3KeyInfoFromExprList vendor/sqlite3/sqlite3.c:145287 #2 0x7f5e5261a7c1 in sqlite3Select vendor/sqlite3/sqlite3.c:151707 #3 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e5258a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e5258a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #10 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #11 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #12 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #13 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #14 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #15 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #16 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #17 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #18 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #19 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #20 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #21 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #22 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #23 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #24 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #25 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #26 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #27 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #28 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #29 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #30 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #31 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #32 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #33 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #34 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #35 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #36 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #37 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #38 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #43 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #44 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #45 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #46 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #47 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #52 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #53 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #54 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #55 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #56 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #57 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #58 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #59 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #64 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #65 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #66 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #70 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #71 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #72 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #73 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #74 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #75 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #76 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #77 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #78 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #79 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #80 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #81 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #82 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #83 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #84 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #85 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #86 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #98 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #99 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #100 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #101 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #106 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #107 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #108 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #109 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #110 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #111 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #112 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #113 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #114 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #115 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #116 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #117 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #118 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #119 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #120 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #121 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #122 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #123 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #124 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #125 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #126 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #127 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #128 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #129 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #130 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #131 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #132 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #133 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #134 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #135 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #136 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #137 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #138 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #139 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #140 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #141 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #142 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #143 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #144 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #145 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #146 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #147 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #148 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #149 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #150 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #151 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #152 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #153 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #154 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #155 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #156 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #157 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #158 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #159 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #160 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #161 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #162 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #163 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #164 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #165 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #166 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #167 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #168 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #169 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:93710:29: runtime error: index 5 out of bounds for type 'u32 [1]' #0 0x7f5e523fb70d in allocateCursor vendor/sqlite3/sqlite3.c:93710 #1 0x7f5e5241231a in sqlite3VdbeExec vendor/sqlite3/sqlite3.c:97773 #2 0x7f5e52450e4d in sqlite3Step vendor/sqlite3/sqlite3.c:91376 #3 0x7f5e52450e4d in sqlite3_step vendor/sqlite3/sqlite3.c:91437 #4 0x7f5e5258aa34 in sqlite3_exec vendor/sqlite3/sqlite3.c:137126 #5 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #6 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #7 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #8 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #9 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #10 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #11 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #12 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #13 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #14 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #15 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #16 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #17 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #18 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #19 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #20 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #21 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #22 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #27 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #28 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #29 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #30 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #31 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #32 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #33 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #34 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #35 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #36 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #37 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #38 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #39 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #40 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #41 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #42 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #43 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #44 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #45 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #46 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #47 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #50 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #51 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #52 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #53 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #54 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #55 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #56 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #57 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #58 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #59 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #60 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #61 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #62 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #63 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #64 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #65 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #66 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #67 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #68 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #69 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #70 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #71 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #72 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #73 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #74 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #75 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #79 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #80 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #81 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #82 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #83 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #84 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #85 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #86 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #87 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #88 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #89 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #90 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #91 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #92 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #93 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #94 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #95 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #96 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #101 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #102 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #103 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #104 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #105 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #106 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #107 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #108 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #109 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #110 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #111 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #112 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #113 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #114 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #115 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #116 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #117 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #118 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #119 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #120 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #121 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #122 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #123 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #124 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #125 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #126 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #127 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #128 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #129 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #130 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #131 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #132 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #133 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #134 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #135 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #136 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #137 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #138 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #139 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #140 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #141 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #142 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #143 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #144 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #145 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #146 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #147 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #148 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #149 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #150 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #151 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #152 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #153 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #154 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #155 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #156 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #157 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #158 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #159 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #160 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #161 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #162 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #163 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #164 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:96477:23: runtime error: index 1 out of bounds for type 'u32 [1]' #0 0x7f5e52448405 in sqlite3VdbeExec vendor/sqlite3/sqlite3.c:96477 #1 0x7f5e52450e4d in sqlite3Step vendor/sqlite3/sqlite3.c:91376 #2 0x7f5e52450e4d in sqlite3_step vendor/sqlite3/sqlite3.c:91437 #3 0x7f5e5258aa34 in sqlite3_exec vendor/sqlite3/sqlite3.c:137126 #4 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #5 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #6 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #7 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #8 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #9 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #10 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #11 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #12 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #13 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #14 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #15 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #16 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #17 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #18 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #19 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #20 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #21 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #22 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #23 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #24 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #25 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #26 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #27 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #28 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #29 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #30 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #31 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #32 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #33 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #34 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #35 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #36 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #37 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #38 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #39 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #40 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #41 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #42 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #43 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #44 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #45 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #46 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #49 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #50 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #51 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #52 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #53 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #54 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #55 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #56 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #57 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #58 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #59 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #60 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #61 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #62 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #63 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #64 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #65 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #66 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #67 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #68 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #69 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #70 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #71 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #72 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #73 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #74 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #75 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #76 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #77 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #78 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #79 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #80 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #81 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #82 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #83 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #84 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #88 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #89 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #90 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #91 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #92 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #93 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #94 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #95 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #96 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #97 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #98 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #99 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #104 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #105 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #106 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #107 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #108 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #109 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #110 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #111 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #112 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #113 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #114 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #115 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #116 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #117 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #118 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #119 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #120 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #121 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #122 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #123 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #124 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #125 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #126 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #127 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #128 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #129 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #130 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #131 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #132 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #133 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #134 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #135 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #136 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #137 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #138 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #139 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #140 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #141 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #142 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #143 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #144 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #145 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #146 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #147 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #148 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #149 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #150 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #151 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #152 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #153 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #154 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #155 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #156 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #157 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #158 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #159 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #160 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #161 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #162 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #163 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:96482:20: runtime error: index 4 out of bounds for type 'u32 [1]' #0 0x7f5e5243fb07 in sqlite3VdbeExec vendor/sqlite3/sqlite3.c:96482 #1 0x7f5e52450e4d in sqlite3Step vendor/sqlite3/sqlite3.c:91376 #2 0x7f5e52450e4d in sqlite3_step vendor/sqlite3/sqlite3.c:91437 #3 0x7f5e5258aa34 in sqlite3_exec vendor/sqlite3/sqlite3.c:137126 #4 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #5 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #6 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #7 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #8 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #9 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #10 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #11 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #12 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #13 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #14 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #15 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #16 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #17 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #18 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #19 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #20 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #21 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #22 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #23 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #24 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #25 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #26 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #27 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #28 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #29 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #30 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #31 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #32 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #33 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #34 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #35 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #36 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #37 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #38 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #39 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #40 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #41 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #42 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #43 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #44 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #45 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #46 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #49 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #50 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #51 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #52 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #53 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #54 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #55 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #56 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #57 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #58 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #59 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #60 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #61 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #62 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #63 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #64 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #65 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #66 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #67 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #68 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #69 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #70 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #71 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #72 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #73 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #74 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #75 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #76 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #77 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #78 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #79 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #80 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #81 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #82 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #83 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #84 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #88 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #89 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #90 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #91 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #92 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #93 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #94 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #95 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #96 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #97 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #98 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #99 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #104 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #105 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #106 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #107 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #108 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #109 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #110 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #111 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #112 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #113 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #114 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #115 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #116 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #117 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #118 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #119 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #120 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #121 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #122 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #123 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #124 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #125 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #126 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #127 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #128 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #129 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #130 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #131 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #132 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #133 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #134 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #135 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #136 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #137 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #138 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #139 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #140 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #141 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #142 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #143 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #144 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #145 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #146 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #147 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #148 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #149 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #150 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #151 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #152 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #153 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #154 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #155 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #156 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #157 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #158 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #159 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #160 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #161 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #162 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #163 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:145930:42: runtime error: index 2 out of bounds for type 'ExprList_item [1]' #0 0x7f5e525dc6f6 in sqlite3ColumnsFromExprList.isra.0 vendor/sqlite3/sqlite3.c:145930 #1 0x7f5e525fc0b6 in sqlite3ExpandSubquery vendor/sqlite3/sqlite3.c:149644 #2 0x7f5e525fc0b6 in selectExpander vendor/sqlite3/sqlite3.c:149767 #3 0x7f5e524760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #4 0x7f5e5260946f in sqlite3SelectExpand vendor/sqlite3/sqlite3.c:150132 #5 0x7f5e5260946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150214 #6 0x7f5e5260946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #7 0x7f5e526181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #8 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #9 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #10 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #11 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #12 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #13 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #14 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #15 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #16 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #17 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #18 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #19 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #20 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #21 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #22 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #23 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #24 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #25 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #26 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #27 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #28 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #29 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #30 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #31 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #32 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #33 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #34 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #35 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #36 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #37 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #38 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #39 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #40 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #41 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #42 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #43 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #44 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #45 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #46 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #47 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #48 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #49 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #50 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #51 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #52 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #53 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #54 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #55 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #56 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #57 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #58 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #59 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #60 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #61 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #62 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #63 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #64 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #65 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #69 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #70 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #71 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #72 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #73 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #74 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #75 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #76 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #77 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #78 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #79 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #80 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #81 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #82 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #83 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #84 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #85 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #86 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #87 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #88 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #89 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #90 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #91 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #92 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #93 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #94 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #95 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #96 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #97 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #98 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #106 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #107 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #108 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #109 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #110 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #111 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #112 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:146060:48: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e525dde7c in sqlite3SubqueryColumnTypes vendor/sqlite3/sqlite3.c:146060 #1 0x7f5e525f0fee in selectAddSubqueryTypeInfo vendor/sqlite3/sqlite3.c:150167 #2 0x7f5e52476583 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107021 #3 0x7f5e526096e3 in sqlite3SelectAddTypeInfo vendor/sqlite3/sqlite3.c:150188 #4 0x7f5e526096e3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150218 #5 0x7f5e526096e3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #6 0x7f5e526181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #7 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #8 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #9 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #10 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #11 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #12 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #13 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #14 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #15 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #16 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #17 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #18 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #19 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #20 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #21 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #22 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #23 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #24 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #25 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #26 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #27 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #28 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #29 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #30 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #31 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #32 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #33 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #34 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #35 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #36 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #37 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #38 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #39 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #40 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #41 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #42 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #43 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #44 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #45 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #46 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #47 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #48 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #49 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #50 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #51 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #52 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #53 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #54 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #55 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #56 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #57 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #58 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #59 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #60 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #61 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #62 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #63 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #64 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #68 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #69 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #70 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #71 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #72 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #73 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #74 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #75 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #76 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #77 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #78 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #79 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #83 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #84 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #85 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #86 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #87 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #88 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #89 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #90 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #91 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #92 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #93 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #98 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #99 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #100 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #101 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #102 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #103 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #104 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #105 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #106 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #107 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #108 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #109 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #110 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #111 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:145675:34: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e525cbcf5 in columnTypeImpl vendor/sqlite3/sqlite3.c:145675 #1 0x7f5e525d9c69 in generateColumnTypes vendor/sqlite3/sqlite3.c:145775 #2 0x7f5e525d9c69 in sqlite3GenerateColumnNames vendor/sqlite3/sqlite3.c:145874 #3 0x7f5e526194f6 in sqlite3Select vendor/sqlite3/sqlite3.c:151190 #4 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #5 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #6 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #7 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #8 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #9 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #10 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #11 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #12 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #13 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #14 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #15 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #16 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #17 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #18 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #19 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #25 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #26 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #27 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #28 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #29 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #30 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #31 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #36 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #37 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #42 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #43 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #44 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #45 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #46 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #49 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #50 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #51 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #52 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #53 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #56 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #57 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #58 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #59 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #60 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #61 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #62 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #63 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #64 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #65 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #66 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #67 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #68 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #69 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #70 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #71 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #72 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #73 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #74 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #75 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #76 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #80 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #81 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #82 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #83 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #84 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #88 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #89 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #90 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #91 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #92 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #93 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #94 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #102 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #103 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #104 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #105 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #106 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #107 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #108 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:147855:39: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e525f52fb in compoundHasDifferentAffinities vendor/sqlite3/sqlite3.c:147855 #1 0x7f5e525f52fb in flattenSubquery vendor/sqlite3/sqlite3.c:148192 #2 0x7f5e52618c2e in sqlite3Select vendor/sqlite3/sqlite3.c:151374 #3 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #10 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #11 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #12 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #13 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #14 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #15 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #16 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #17 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #18 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #24 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #25 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #26 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #27 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #28 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #29 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #30 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #35 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #36 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #41 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #42 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #43 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #44 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #45 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #46 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #47 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #48 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #49 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #50 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #55 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #56 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #57 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #58 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #59 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #60 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #61 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #62 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #63 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #64 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #65 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #66 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #67 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #68 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #69 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #70 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #71 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #72 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #73 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #74 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #75 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #79 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #80 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #81 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #82 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #83 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #87 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #88 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #89 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #90 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #91 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #92 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #93 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #94 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #95 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #96 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #97 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #98 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #99 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #100 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #101 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #102 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #103 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #104 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #105 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #106 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #107 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:147860:47: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e525f5239 in compoundHasDifferentAffinities vendor/sqlite3/sqlite3.c:147860 #1 0x7f5e525f5239 in flattenSubquery vendor/sqlite3/sqlite3.c:148192 #2 0x7f5e52618c2e in sqlite3Select vendor/sqlite3/sqlite3.c:151374 #3 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #10 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #11 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #12 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #13 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #14 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #15 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #16 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #17 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #18 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #24 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #25 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #26 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #27 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #28 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #29 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #30 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #35 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #36 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #41 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #42 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #43 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #44 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #45 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #46 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #47 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #48 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #49 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #50 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #55 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #56 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #57 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #58 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #59 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #60 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #61 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #62 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #63 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #64 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #65 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #66 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #67 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #68 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #69 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #70 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #71 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #72 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #73 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #74 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #75 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #79 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #80 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #81 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #82 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #83 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #87 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #88 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #89 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #90 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #91 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #92 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #93 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #94 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #95 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #96 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #97 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #98 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #99 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #100 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #101 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #102 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #103 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #104 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #105 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #106 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #107 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:147583:32: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e525eb18d in substExpr vendor/sqlite3/sqlite3.c:147583 #1 0x7f5e5295f515 in substExprList.part.0.lto_priv.0 vendor/sqlite3/sqlite3.c:147665 #2 0x7f5e5295f741 in substExprList vendor/sqlite3/sqlite3.c:147663 #3 0x7f5e5295f741 in substSelect.part.0.lto_priv.0 vendor/sqlite3/sqlite3.c:147678 #4 0x7f5e525f47ab in substSelect vendor/sqlite3/sqlite3.c:147676 #5 0x7f5e525f47ab in flattenSubquery vendor/sqlite3/sqlite3.c:148436 #6 0x7f5e52618c2e in sqlite3Select vendor/sqlite3/sqlite3.c:151374 #7 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #8 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #9 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #10 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #11 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #12 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #13 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #14 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #15 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #16 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #17 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #18 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #19 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #20 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #21 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #22 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #23 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #24 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #25 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #26 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #27 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #28 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #29 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #30 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #31 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #32 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #33 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #34 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #35 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #36 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #37 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #38 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #39 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #40 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #41 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #42 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #43 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #44 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #45 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #46 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #47 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #48 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #49 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #50 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #51 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #52 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #53 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #54 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #55 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #56 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #57 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #58 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #59 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #60 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #61 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #62 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #63 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #64 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #68 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #69 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #70 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #71 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #72 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #73 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #74 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #75 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #76 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #77 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #78 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #79 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #83 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #84 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #85 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #86 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #87 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #88 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #89 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #90 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #91 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #92 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #93 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #98 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #99 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #100 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #101 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #102 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #103 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #104 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #105 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #106 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #107 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #108 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #109 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #110 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #111 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:147625:34: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e525eb40e in substExpr vendor/sqlite3/sqlite3.c:147625 #1 0x7f5e5295f515 in substExprList.part.0.lto_priv.0 vendor/sqlite3/sqlite3.c:147665 #2 0x7f5e5295f741 in substExprList vendor/sqlite3/sqlite3.c:147663 #3 0x7f5e5295f741 in substSelect.part.0.lto_priv.0 vendor/sqlite3/sqlite3.c:147678 #4 0x7f5e525f47ab in substSelect vendor/sqlite3/sqlite3.c:147676 #5 0x7f5e525f47ab in flattenSubquery vendor/sqlite3/sqlite3.c:148436 #6 0x7f5e52618c2e in sqlite3Select vendor/sqlite3/sqlite3.c:151374 #7 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #8 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #9 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #10 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #11 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #12 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #13 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #14 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #15 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #16 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #17 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #18 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #19 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #20 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #21 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #22 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #23 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #24 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #25 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #26 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #27 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #28 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #29 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #30 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #31 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #32 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #33 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #34 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #35 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #36 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #37 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #38 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #39 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #40 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #41 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #42 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #43 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #44 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #45 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #46 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #47 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #48 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #49 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #50 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #51 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #52 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #53 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #54 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #55 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #56 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #57 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #58 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #59 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #60 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #61 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #62 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #63 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #64 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #68 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #69 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #70 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #71 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #72 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #73 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #74 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #75 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #76 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #77 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #78 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #79 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #83 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #84 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #85 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #86 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #87 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #88 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #89 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #90 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #91 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #92 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #93 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #98 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #99 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #100 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #101 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #102 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #103 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #104 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #105 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #106 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #107 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #108 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #109 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #110 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #111 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:163112:55: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e5295bf44 in sqlite3WhereExprListUsage.part.0.lto_priv.0 vendor/sqlite3/sqlite3.c:163112 #1 0x7f5e52686c1d in sqlite3WhereExprListUsage vendor/sqlite3/sqlite3.c:163110 #2 0x7f5e52686c1d in exprAnalyze vendor/sqlite3/sqlite3.c:162413 #3 0x7f5e5268a6ff in exprAnalyzeOrTerm vendor/sqlite3/sqlite3.c:162201 #4 0x7f5e5268a6ff in exprAnalyze vendor/sqlite3/sqlite3.c:162584 #5 0x7f5e526d9d64 in sqlite3WhereExprAnalyze vendor/sqlite3/sqlite3.c:163133 #6 0x7f5e526d9d64 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:169832 #7 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #8 0x7f5e525e1e5c in multiSelectOrderBy vendor/sqlite3/sqlite3.c:147359 #9 0x7f5e525e1e5c in multiSelect vendor/sqlite3/sqlite3.c:146636 #10 0x7f5e5261c467 in sqlite3Select vendor/sqlite3/sqlite3.c:151392 #11 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #12 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #13 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #14 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #15 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #16 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #17 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #18 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #19 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #20 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #21 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #22 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #23 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #24 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #25 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #26 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #27 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #28 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #29 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #30 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #31 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #36 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #37 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #38 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #43 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #44 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #45 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #46 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #49 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #50 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #51 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #52 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #53 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #56 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #57 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #58 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #63 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #64 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #65 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #66 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #67 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #68 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #69 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #70 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #71 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #72 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #73 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #74 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #75 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #81 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #82 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #83 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #87 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #88 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #89 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #90 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #91 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #92 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #93 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #98 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #99 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #100 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #101 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #102 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #103 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #104 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #105 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #106 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #107 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #108 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #109 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #110 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #111 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #112 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #113 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #114 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #115 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:114966:43: runtime error: index 2 out of bounds for type 'ExprList_item [1]' #0 0x7f5e524c987d in sqlite3ExprCodeRunJustOnce vendor/sqlite3/sqlite3.c:114966 #1 0x7f5e524c9c56 in sqlite3ExprCodeTemp vendor/sqlite3/sqlite3.c:114998 #2 0x7f5e524d0a31 in sqlite3ExprIfFalse vendor/sqlite3/sqlite3.c:115480 #3 0x7f5e52666e39 in sqlite3WhereCodeOneLoopStart vendor/sqlite3/sqlite3.c:161029 #4 0x7f5e526dc650 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:170294 #5 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #6 0x7f5e525e1e5c in multiSelectOrderBy vendor/sqlite3/sqlite3.c:147359 #7 0x7f5e525e1e5c in multiSelect vendor/sqlite3/sqlite3.c:146636 #8 0x7f5e5261c467 in sqlite3Select vendor/sqlite3/sqlite3.c:151392 #9 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #10 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #11 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #12 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #13 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #14 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #15 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #16 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #17 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #18 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #19 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #20 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #21 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #22 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #26 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #27 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #28 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #29 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #43 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #44 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #45 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #46 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #47 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #48 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #49 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #54 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #55 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #56 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #57 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #58 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #59 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #60 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #61 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #62 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #63 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #64 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #65 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #66 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #70 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #71 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #72 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #73 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #74 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #75 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #76 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #77 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #80 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #81 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #82 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #83 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #84 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #85 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #86 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #87 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #88 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #89 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #93 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #94 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #95 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #96 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #97 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #98 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #99 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #106 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #107 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #108 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #109 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #110 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #111 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #112 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #113 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:122207:56: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e525041c2 in sqlite3FinishCoding vendor/sqlite3/sqlite3.c:122207 #1 0x7f5e52709834 in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177464 #2 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #3 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #4 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #5 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #6 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #7 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #8 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #9 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #10 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #11 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #12 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #13 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #14 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #15 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #16 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #17 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #18 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #22 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #23 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #24 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #25 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #26 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #27 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #28 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #29 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #30 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #31 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #32 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #33 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #34 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #35 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #36 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #37 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #38 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #39 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #40 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #41 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #42 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #43 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #44 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #45 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #46 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #47 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #48 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #49 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #50 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #51 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #52 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #53 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #54 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #55 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #56 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #57 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #58 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #62 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #63 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #64 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #65 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #69 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #70 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #71 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #72 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #73 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #74 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #75 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #76 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #77 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #78 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #79 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #80 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #81 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #82 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #83 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #84 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #85 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #86 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #87 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #88 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #89 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #90 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #91 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #92 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #93 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #98 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #99 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #100 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #101 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #102 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #103 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #104 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #105 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:122207:39: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e52504155 in sqlite3FinishCoding vendor/sqlite3/sqlite3.c:122207 #1 0x7f5e52709834 in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177464 #2 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #3 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #4 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #5 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #6 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #7 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #8 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #9 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #10 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #11 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #12 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #13 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #14 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #15 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #16 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #17 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #18 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #22 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #23 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #24 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #25 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #26 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #27 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #28 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #29 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #30 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #31 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #32 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #33 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #34 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #35 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #36 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #37 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #38 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #39 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #40 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #41 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #42 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #43 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #44 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #45 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #46 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #47 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #48 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #49 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #50 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #51 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #52 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #53 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #54 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #55 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #56 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #57 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #58 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #62 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #63 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #64 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #65 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #69 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #70 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #71 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #72 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #73 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #74 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #75 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #76 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #77 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #78 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #79 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #80 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #81 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #82 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #83 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #84 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #85 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #86 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #87 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #88 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #89 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #90 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #91 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #92 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #93 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #98 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #99 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #100 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #101 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #102 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #103 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #104 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #105 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:96527:18: runtime error: index 1 out of bounds for type 'u32 [1]' #0 0x7f5e5244c7a9 in sqlite3VdbeExec vendor/sqlite3/sqlite3.c:96527 #1 0x7f5e52450e4d in sqlite3Step vendor/sqlite3/sqlite3.c:91376 #2 0x7f5e52450e4d in sqlite3_step vendor/sqlite3/sqlite3.c:91437 #3 0x7f5e52253af9 in SqliteResultImpl::step_run() /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:341 #4 0x7f5e5226d532 in SqliteResultImpl::step() /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:334 #5 0x7f5e5226d532 in SqliteResultImpl::after_bind(bool) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:306 #6 0x7f5e5226d532 in SqliteResultImpl::after_bind(bool) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:303 #7 0x7f5e5226d532 in SqliteResultImpl::bind(cpp11::r_vector const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:147 #8 0x7f5e5226d532 in DbResult::bind(cpp11::r_vector const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/DbResult.cpp:49 #9 0x7f5e5226d532 in result_bind(DbResult*, cpp11::r_vector) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:32 #10 0x7f5e5226d532 in _RSQLite_result_bind /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:101 #11 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #12 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #13 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #14 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #15 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #16 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #17 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #18 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #19 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #20 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #21 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #22 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #23 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #24 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #25 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #26 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #31 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #32 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #33 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #34 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #35 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #36 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #40 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #41 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #42 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #43 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #44 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #45 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #46 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #47 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #48 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #49 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #50 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #51 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #52 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #53 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #56 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #57 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #58 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #59 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #64 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #65 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #68 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #69 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #70 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #71 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #72 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #73 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #74 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #75 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #76 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #77 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #78 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #79 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #80 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #81 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #82 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #83 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:111616:44: runtime error: index 2 out of bounds for type 'ExprList_item [1]' #0 0x7f5e52717538 in sqlite3ExprListSetSpan vendor/sqlite3/sqlite3.c:111616 #1 0x7f5e52717538 in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177853 #2 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #3 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #4 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #5 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #6 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #7 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #8 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #9 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #10 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #11 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #12 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #13 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #14 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #15 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #16 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #17 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #18 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #22 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #23 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #24 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #25 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #26 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #27 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #28 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #29 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #30 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #31 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #32 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #33 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #34 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #35 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #36 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #37 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #38 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #39 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #40 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #41 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #42 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #43 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #44 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #47 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #48 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #49 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #54 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #55 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #56 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #57 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #58 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #59 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #60 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #61 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #62 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #63 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #64 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #65 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #66 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #70 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #71 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #72 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #73 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #74 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #75 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #76 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #77 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #80 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #81 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #82 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #83 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #84 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #85 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #86 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #87 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #88 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #89 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #93 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #94 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #95 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #96 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #97 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #98 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #99 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #106 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #107 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #108 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #109 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #110 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #111 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #112 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #113 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:149853:19: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e52605b5f in selectExpander vendor/sqlite3/sqlite3.c:149853 #1 0x7f5e524760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #2 0x7f5e5260946f in sqlite3SelectExpand vendor/sqlite3/sqlite3.c:150132 #3 0x7f5e5260946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150214 #4 0x7f5e5260946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #5 0x7f5e526181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #6 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #7 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #8 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #9 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #10 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #11 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #12 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #13 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #14 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #15 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #16 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #17 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #18 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #19 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #20 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #21 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #25 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #26 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #31 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #32 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #33 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #34 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #35 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #36 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #37 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #38 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #39 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #40 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #41 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #42 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #43 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #44 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #45 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #46 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #47 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #50 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #51 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #52 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #53 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #54 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #55 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #56 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #57 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #58 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #59 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #60 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #61 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #62 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #63 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #64 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #65 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #66 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #67 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #68 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #69 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #70 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #71 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #72 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #73 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #74 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #75 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #76 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #77 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #78 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #79 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #80 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #81 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #82 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #83 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #84 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #85 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #86 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #87 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #88 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #89 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #90 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #91 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #92 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #93 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #94 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #105 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #106 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #111 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #112 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #113 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #114 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #115 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #116 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #117 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #118 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:111583:22: runtime error: index 3 out of bounds for type 'ExprList_item [1]' #0 0x7f5e5295dd56 in sqlite3ExprListSetName.part.0.lto_priv.0 vendor/sqlite3/sqlite3.c:111583 #1 0x7f5e5271300e in sqlite3ExprListSetName vendor/sqlite3/sqlite3.c:177852 #2 0x7f5e5271300e in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177852 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525acd7b in sqlite3InitCallback vendor/sqlite3/sqlite3.c:142738 #7 0x7f5e5258b263 in sqlite3_exec vendor/sqlite3/sqlite3.c:137157 #8 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #9 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #10 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #11 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #12 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #13 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #14 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #15 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #16 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #17 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #18 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #19 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #20 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #21 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #22 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #23 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #24 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #25 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #26 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #27 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #28 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #29 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #30 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #31 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #32 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #33 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #34 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #35 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #36 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #37 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #38 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #39 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #40 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #41 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #42 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #43 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #44 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #45 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #46 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #47 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #48 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #49 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #50 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #51 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #52 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #53 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #54 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #55 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #56 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #57 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #58 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #59 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #60 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #61 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #62 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #63 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #64 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #65 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #66 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #70 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #71 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #72 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #73 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #74 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #75 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #76 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #77 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #78 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #79 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #80 0x877594 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3665 #81 0x867c3c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #82 0x877594 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3665 #83 0x867c3c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #84 0x877594 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3665 #85 0x867c3c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #86 0x87be52 in do_if /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2704 #87 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #88 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #89 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #93 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #94 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #95 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #96 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #97 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #98 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #99 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #100 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #101 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #102 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #103 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #104 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #105 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #106 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #111 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #112 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #113 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #114 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #115 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #116 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #117 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #118 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #119 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #120 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #121 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #122 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #123 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #124 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #125 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #126 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #127 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #128 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #129 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #130 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #131 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #132 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #133 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #134 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #135 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #136 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:145869:32: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e525da0f7 in sqlite3GenerateColumnNames vendor/sqlite3/sqlite3.c:145869 #1 0x7f5e526194f6 in sqlite3Select vendor/sqlite3/sqlite3.c:151190 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e5250ad7c in sqlite3_prepare vendor/sqlite3/sqlite3.c:143531 #8 0x7f5e5250ad7c in loadStatTbl vendor/sqlite3/sqlite3.c:120828 #9 0x7f5e5250ad7c in loadStat4 vendor/sqlite3/sqlite3.c:120956 #10 0x7f5e5250ad7c in sqlite3AnalysisLoad vendor/sqlite3/sqlite3.c:121039 #11 0x7f5e525aeee2 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142983 #12 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #13 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #14 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #15 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #16 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #17 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #18 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #19 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #20 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #21 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #22 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #23 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #24 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #25 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #26 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #27 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #28 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #29 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #30 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #31 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #32 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #33 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #34 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #35 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #36 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #37 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #38 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #39 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #40 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #41 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #42 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #43 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #44 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #45 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #46 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #47 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #48 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #49 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #54 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #55 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #56 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #57 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #58 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #59 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #60 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #61 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #62 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #63 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #68 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #69 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #70 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #71 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #72 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #73 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #74 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #75 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #76 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #80 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #81 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #82 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #83 0x877594 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3665 #84 0x867c3c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #85 0x877594 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3665 #86 0x867c3c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #87 0x877594 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3665 #88 0x867c3c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #89 0x87be52 in do_if /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2704 #90 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #91 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #92 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #93 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #94 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #95 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #96 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #97 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #98 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #99 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #103 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #104 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #105 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #106 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #107 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #108 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #109 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #110 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #111 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #112 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #113 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #114 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #115 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #116 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #117 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #118 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #119 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #120 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #121 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #122 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #123 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #124 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #125 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #126 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #127 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #128 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #129 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #130 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #131 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #132 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #133 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #134 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #135 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #136 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #137 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #138 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #139 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:127610:18: runtime error: index 1 out of bounds for type 'CollSeq *[1]' #0 0x7f5e52561b1e in sqlite3KeyInfoOfIndex vendor/sqlite3/sqlite3.c:127610 #1 0x7f5e526dc2c9 in sqlite3VdbeSetP4KeyInfo vendor/sqlite3/sqlite3.c:86609 #2 0x7f5e526dc2c9 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:170189 #3 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #4 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #5 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #6 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #7 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #8 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #9 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #10 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #11 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #12 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #13 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #14 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #15 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #16 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #17 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #18 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #19 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #25 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #26 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #27 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #28 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #29 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #30 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #31 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #36 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #37 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #38 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #43 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #44 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #45 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #50 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #51 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #52 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #53 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #54 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #57 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #58 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #59 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #64 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #65 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #66 0x877594 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3665 #67 0x867c3c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #68 0x877594 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3665 #69 0x867c3c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #70 0x877594 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3665 #71 0x867c3c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #72 0x87be52 in do_if /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2704 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #81 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #82 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #98 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #115 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #116 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #117 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #118 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #119 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #120 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:125850:19: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e52532b1a in sqlite3HasExplicitNulls vendor/sqlite3/sqlite3.c:125850 #1 0x7f5e52533483 in sqlite3CreateIndex vendor/sqlite3/sqlite3.c:125915 #2 0x7f5e5270d28c in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177711 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525acd7b in sqlite3InitCallback vendor/sqlite3/sqlite3.c:142738 #7 0x7f5e5258b263 in sqlite3_exec vendor/sqlite3/sqlite3.c:137157 #8 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #9 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #10 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #11 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #12 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #13 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #14 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #15 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #16 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #17 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #18 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #19 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #20 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #21 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #22 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #23 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #24 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #25 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #26 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #27 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #28 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #29 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #30 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #31 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #32 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #33 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #34 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #35 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #36 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #37 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #38 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #39 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #40 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #41 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #42 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #43 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #44 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #45 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #46 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #47 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #48 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #49 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #50 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #51 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #52 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #53 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #54 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #55 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #56 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #57 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #58 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #59 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #60 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #61 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #62 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #63 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #64 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #65 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #66 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #67 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #68 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #69 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #70 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #71 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #72 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #73 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #74 0x877594 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3665 #75 0x867c3c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #76 0x877594 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3665 #77 0x867c3c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #78 0x877594 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3665 #79 0x867c3c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #80 0x87be52 in do_if /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2704 #81 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #82 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #83 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #88 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #89 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #90 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #94 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #95 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #96 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #97 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #98 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #106 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #107 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #108 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #109 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #110 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #111 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #112 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #113 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #114 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #115 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #116 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #117 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #118 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #119 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #120 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #121 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #122 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #123 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #124 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #125 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #126 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #127 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #128 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #129 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #130 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:126089:27: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e5253aeea in sqlite3CreateIndex vendor/sqlite3/sqlite3.c:126089 #1 0x7f5e5270d28c in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177711 #2 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #3 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #4 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #5 0x7f5e525acd7b in sqlite3InitCallback vendor/sqlite3/sqlite3.c:142738 #6 0x7f5e5258b263 in sqlite3_exec vendor/sqlite3/sqlite3.c:137157 #7 0x7f5e525aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #8 0x7f5e525b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #9 0x7f5e525b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #10 0x7f5e525b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #11 0x7f5e5270e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #12 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #13 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #14 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #15 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #16 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #17 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #18 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #19 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #20 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #21 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #22 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #23 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #24 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #25 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #26 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #27 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #28 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #29 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #30 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #31 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #36 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #37 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #38 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #43 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #44 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #45 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #46 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #47 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #50 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #51 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #52 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #53 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #54 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #57 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #58 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #59 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #64 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #65 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #66 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #70 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #71 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #72 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #73 0x877594 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3665 #74 0x867c3c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #75 0x877594 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3665 #76 0x867c3c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #77 0x877594 in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3665 #78 0x867c3c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1251 #79 0x87be52 in do_if /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2704 #80 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #81 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #82 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #88 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #89 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #93 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #94 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #95 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #96 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #97 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #98 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #99 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #100 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #101 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #102 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #103 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #104 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #105 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #106 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #107 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #108 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #109 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #110 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #111 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #114 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #115 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #116 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #117 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #118 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #119 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #120 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #121 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #122 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #123 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #124 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #125 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #126 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #127 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #128 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #129 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:79337:14: runtime error: load of address 0x7f5e6b914640 with insufficient space for an object of type 'struct MemPage *' 0x7f5e6b914640: note: pointer points here 50 52 00 00 90 f5 46 02 10 52 00 00 90 d5 48 02 10 52 00 00 90 e9 1b 02 10 52 00 00 00 00 00 00 ^ #0 0x7f5e523a2177 in balance_nonroot vendor/sqlite3/sqlite3.c:79337 #1 0x7f5e523a74f9 in balance vendor/sqlite3/sqlite3.c:79798 #2 0x7f5e523b472d in sqlite3BtreeInsert vendor/sqlite3/sqlite3.c:80253 #3 0x7f5e52420a56 in sqlite3VdbeExec vendor/sqlite3/sqlite3.c:99891 #4 0x7f5e52450e4d in sqlite3Step vendor/sqlite3/sqlite3.c:91376 #5 0x7f5e52450e4d in sqlite3_step vendor/sqlite3/sqlite3.c:91437 #6 0x7f5e52253af9 in SqliteResultImpl::step_run() /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:341 #7 0x7f5e522570aa in SqliteResultImpl::step() /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:334 #8 0x7f5e522570aa in SqliteResultImpl::fetch_rows(int, int&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:322 #9 0x7f5e522570aa in SqliteResultImpl::fetch(int) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:158 #10 0x7f5e522570aa in DbResult::fetch(int) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/DbResult.cpp:56 #11 0x7f5e522570aa in result_fetch(DbResult*, int) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:27 #12 0x7f5e522570aa in _RSQLite_result_fetch /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:94 #13 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #14 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #15 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #16 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #17 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #18 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #19 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #20 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #21 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #22 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #23 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #24 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #27 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #28 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #29 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #30 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #31 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #32 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #33 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #34 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #35 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #36 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #37 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #38 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #39 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #40 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #41 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #42 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #43 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #44 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #45 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #46 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #47 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #48 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #49 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #50 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #51 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #52 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #53 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #54 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #55 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #56 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #57 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #58 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #59 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #60 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #61 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #62 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #63 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #64 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #65 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #66 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #67 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #68 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #69 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #70 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #71 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #72 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #73 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #74 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #75 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #76 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #77 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #78 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #79 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #83 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #84 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #85 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #86 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #87 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #88 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #89 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #90 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #93 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #94 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #102 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #103 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #104 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #109 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #110 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #111 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #112 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #113 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #114 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #115 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #116 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #117 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #118 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #119 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #120 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #121 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #122 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #123 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #124 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #125 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #126 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:126774:12: runtime error: index 1 out of bounds for type 'SrcItem [1]' #0 0x7f5e52557cdc in sqlite3SrcListEnlarge vendor/sqlite3/sqlite3.c:126774 #1 0x7f5e52558e98 in sqlite3SrcListAppend vendor/sqlite3/sqlite3.c:126837 #2 0x7f5e5255a025 in sqlite3SrcListAppendFromTerm vendor/sqlite3/sqlite3.c:127023 #3 0x7f5e5270693c in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177896 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #10 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #11 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #12 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #13 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #14 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #15 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #16 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #17 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #18 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #24 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #25 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #26 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #27 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #28 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #29 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #30 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #35 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #36 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #37 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #42 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #43 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #44 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #52 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #53 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #56 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #57 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #58 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #70 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #71 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #72 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #76 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #80 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #81 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #82 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #83 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #90 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #91 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #92 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #93 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #98 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #99 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #114 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #115 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #116 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #117 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #118 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #119 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #120 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #121 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:177891:97: runtime error: index 1 out of bounds for type 'SrcItem [1]' #0 0x7f5e527217ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177891 #1 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #2 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #3 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #4 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #5 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #6 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #7 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #8 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #9 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #10 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #11 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #12 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #13 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #14 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #15 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #16 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #17 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #21 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #22 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #23 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #24 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #25 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #26 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #27 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #28 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #29 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #30 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #31 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #32 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #33 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #34 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #35 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #36 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #37 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #38 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #39 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #40 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #41 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #42 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #43 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #46 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #47 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #48 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #49 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #50 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #51 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #52 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #53 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #54 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #55 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #56 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #57 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #58 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #59 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #60 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #61 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #62 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #63 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #64 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #65 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #66 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #67 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #68 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #69 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #70 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #71 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #72 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #73 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #74 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #75 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #76 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #77 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #78 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #79 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #80 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #81 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #82 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #83 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #84 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #87 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #88 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #89 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #90 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #91 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #92 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #93 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #94 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #95 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #96 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #97 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #98 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #99 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #100 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #101 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #102 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #103 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #104 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #105 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #106 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #107 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #108 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #109 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #110 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #111 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #112 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #113 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #114 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #115 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #116 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #117 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #118 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #119 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #120 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:126772:18: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e52557dd4 in sqlite3SrcListEnlarge vendor/sqlite3/sqlite3.c:126772 #1 0x7f5e52558e98 in sqlite3SrcListAppend vendor/sqlite3/sqlite3.c:126837 #2 0x7f5e5255a025 in sqlite3SrcListAppendFromTerm vendor/sqlite3/sqlite3.c:127023 #3 0x7f5e5270693c in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177896 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #10 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #11 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #12 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #13 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #14 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #15 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #16 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #17 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #18 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #24 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #25 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #26 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #27 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #28 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #29 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #30 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #35 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #36 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #37 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #42 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #43 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #44 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #52 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #53 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #56 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #57 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #58 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #70 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #71 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #72 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #76 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #80 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #81 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #82 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #83 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #90 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #91 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #92 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #93 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #98 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #99 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #114 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #115 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #116 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #117 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #118 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #119 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #120 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #121 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:126845:20: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e52559200 in sqlite3SrcListAppend vendor/sqlite3/sqlite3.c:126845 #1 0x7f5e5255a025 in sqlite3SrcListAppendFromTerm vendor/sqlite3/sqlite3.c:127023 #2 0x7f5e5270693c in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177896 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #9 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #10 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #11 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #12 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #13 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #14 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #15 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #16 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #17 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #27 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #28 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #29 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #43 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #55 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #56 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #57 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #62 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #63 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #64 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #69 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #70 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #71 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #81 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #82 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #98 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #115 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #116 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #117 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #118 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #119 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #120 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:127028:16: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e5255a3b8 in sqlite3SrcListAppendFromTerm vendor/sqlite3/sqlite3.c:127028 #1 0x7f5e5270693c in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177896 #2 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #3 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #4 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #5 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #6 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #7 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #8 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #9 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #10 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #11 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #12 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #13 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #14 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #15 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #16 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #17 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #18 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #22 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #23 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #24 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #25 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #26 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #27 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #28 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #29 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #30 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #31 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #32 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #33 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #34 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #35 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #36 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #37 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #38 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #39 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #40 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #41 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #42 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #43 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #44 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #47 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #48 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #49 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #54 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #55 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #56 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #57 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #58 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #59 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #60 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #61 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #62 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #63 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #68 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #69 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #70 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #71 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #74 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #75 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #76 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #77 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #78 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #79 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #80 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #81 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #82 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #83 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #84 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #85 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #88 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #89 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #93 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #94 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #95 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #96 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #97 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #98 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #99 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #100 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #101 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #102 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #103 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #104 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #105 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #106 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #107 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #108 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #109 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #110 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #111 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #112 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #113 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #114 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #115 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #116 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #117 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #118 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #119 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #120 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:127157:45: runtime error: index 1 out of bounds for type 'SrcItem [1]' #0 0x7f5e5255bbaf in sqlite3SrcListShiftJoinType.isra.0 vendor/sqlite3/sqlite3.c:127157 #1 0x7f5e5270853a in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177886 #2 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #3 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #4 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #5 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #6 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #7 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #8 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #9 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #10 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #11 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #12 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #13 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #14 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #15 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #16 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #17 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #18 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #22 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #23 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #24 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #25 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #26 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #27 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #28 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #29 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #30 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #31 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #32 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #33 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #34 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #35 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #36 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #37 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #38 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #39 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #40 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #41 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #42 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #43 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #44 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #47 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #48 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #49 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #54 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #55 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #56 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #57 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #58 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #59 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #60 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #61 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #62 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #63 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #68 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #69 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #70 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #71 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #74 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #75 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #76 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #77 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #78 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #79 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #80 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #81 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #82 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #83 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #84 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #85 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #88 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #89 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #93 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #94 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #95 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #96 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #97 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #98 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #99 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #100 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #101 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #102 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #103 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #104 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #105 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #106 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #107 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #108 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #109 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #110 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #111 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #112 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #113 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #114 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #115 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #116 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #117 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #118 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #119 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #120 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:127157:23: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e5255bbe3 in sqlite3SrcListShiftJoinType.isra.0 vendor/sqlite3/sqlite3.c:127157 #1 0x7f5e5270853a in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177886 #2 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #3 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #4 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #5 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #6 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #7 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #8 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #9 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #10 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #11 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #12 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #13 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #14 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #15 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #16 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #17 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #18 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #22 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #23 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #24 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #25 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #26 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #27 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #28 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #29 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #30 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #31 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #32 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #33 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #34 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #35 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #36 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #37 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #38 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #39 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #40 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #41 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #42 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #43 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #44 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #47 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #48 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #49 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #54 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #55 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #56 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #57 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #58 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #59 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #60 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #61 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #62 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #63 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #68 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #69 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #70 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #71 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #74 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #75 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #76 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #77 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #78 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #79 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #80 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #81 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #82 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #83 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #84 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #85 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #88 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #89 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #93 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #94 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #95 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #96 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #97 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #98 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #99 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #100 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #101 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #102 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #103 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #104 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #105 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #106 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #107 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #108 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #109 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #110 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #111 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #112 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #113 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #114 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #115 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #116 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #117 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #118 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #119 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #120 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:107941:30: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e5248c2da in sqlite3CreateColumnExpr vendor/sqlite3/sqlite3.c:107941 #1 0x7f5e525fe85d in sqlite3ProcessJoin vendor/sqlite3/sqlite3.c:144304 #2 0x7f5e525fe85d in selectExpander vendor/sqlite3/sqlite3.c:149837 #3 0x7f5e524760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #4 0x7f5e5260946f in sqlite3SelectExpand vendor/sqlite3/sqlite3.c:150132 #5 0x7f5e5260946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150214 #6 0x7f5e5260946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #7 0x7f5e526181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #8 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #9 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #10 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #11 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #12 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #13 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #14 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #15 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #16 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #17 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #18 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #19 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #20 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #21 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #22 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #23 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #24 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #25 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #26 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #27 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #28 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #29 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #30 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #31 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #32 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #33 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #34 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #35 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #36 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #37 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #38 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #39 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #40 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #41 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #42 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #43 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #44 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #45 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #46 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #47 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #48 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #49 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #50 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #51 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #52 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #55 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #56 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #57 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #58 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #59 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #60 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #61 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #62 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #63 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #68 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #69 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #70 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #71 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #72 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #73 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #74 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #75 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #76 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #77 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #78 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #79 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #80 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #81 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #82 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #83 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #84 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #85 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #86 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #87 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #88 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #89 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #90 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #93 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #94 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #95 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #96 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #97 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #98 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #99 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #100 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #101 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #102 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #103 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #104 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #105 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #106 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #115 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #116 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #117 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #118 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #119 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #120 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #121 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #122 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #123 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #124 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #125 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #126 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #127 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #128 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:108988:35: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e524a6c93 in resolveSelectStep vendor/sqlite3/sqlite3.c:108988 #1 0x7f5e524760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #2 0x7f5e526095d3 in sqlite3ResolveSelectNames vendor/sqlite3/sqlite3.c:109330 #3 0x7f5e526095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150216 #4 0x7f5e526095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #5 0x7f5e526181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #6 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #7 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #8 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #9 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #10 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #11 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #12 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #13 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #14 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #15 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #16 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #17 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #18 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #19 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #20 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #21 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #25 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #26 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #31 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #32 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #33 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #34 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #35 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #36 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #37 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #38 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #39 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #40 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #41 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #42 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #43 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #44 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #45 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #46 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #47 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #50 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #51 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #52 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #53 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #54 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #55 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #56 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #57 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #58 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #59 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #60 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #61 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #62 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #63 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #64 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #65 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #66 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #67 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #68 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #69 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #70 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #71 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #72 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #73 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #74 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #75 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #76 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #77 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #78 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #79 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #83 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #84 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #85 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #86 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #87 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #88 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #89 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #90 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #93 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #94 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #102 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #103 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #104 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #109 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #110 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #111 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #112 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #113 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #114 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #115 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #116 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #117 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #118 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #119 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #120 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #121 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #122 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #123 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #124 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #125 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #126 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:107740:30: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e5247fb61 in lookupName vendor/sqlite3/sqlite3.c:107740 #1 0x7f5e52498de2 in resolveExprStep vendor/sqlite3/sqlite3.c:108182 #2 0x7f5e52476ab4 in sqlite3WalkExprNN vendor/sqlite3/sqlite3.c:106871 #3 0x7f5e52476ffc in sqlite3WalkExpr vendor/sqlite3/sqlite3.c:106901 #4 0x7f5e52476ffc in sqlite3WalkExprList vendor/sqlite3/sqlite3.c:106913 #5 0x7f5e52476c55 in sqlite3WalkExprNN vendor/sqlite3/sqlite3.c:106887 #6 0x7f5e52476b66 in sqlite3WalkExprNN vendor/sqlite3/sqlite3.c:106875 #7 0x7f5e52476b66 in sqlite3WalkExprNN vendor/sqlite3/sqlite3.c:106875 #8 0x7f5e524836dc in sqlite3ResolveExprNames vendor/sqlite3/sqlite3.c:109240 #9 0x7f5e524a55bb in resolveSelectStep vendor/sqlite3/sqlite3.c:109062 #10 0x7f5e524760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #11 0x7f5e526095d3 in sqlite3ResolveSelectNames vendor/sqlite3/sqlite3.c:109330 #12 0x7f5e526095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150216 #13 0x7f5e526095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #14 0x7f5e526181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #15 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #16 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #17 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #18 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #19 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #20 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #21 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #22 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #23 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #24 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #25 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #26 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #27 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #28 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #29 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #30 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #31 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #32 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #33 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #34 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #35 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #36 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #37 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #38 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #39 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #40 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #41 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #42 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #43 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #44 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #45 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #46 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #47 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #48 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #49 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #54 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #55 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #56 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #57 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #58 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #59 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #62 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #63 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #68 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #69 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #70 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #71 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #72 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #73 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #74 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #75 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #76 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #77 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #81 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #82 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #83 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #84 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #85 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #86 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #87 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #88 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #89 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #90 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #93 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #94 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #95 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #96 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #97 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #98 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #99 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #100 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #101 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #102 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #103 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #104 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #105 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #110 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #111 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #112 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #113 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #114 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #115 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #116 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #117 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #118 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #119 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #120 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #121 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #122 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #123 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #124 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #125 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #126 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #127 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #128 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #129 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #130 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #131 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #132 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #133 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #134 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #135 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:107741:22: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e5247faa8 in lookupName vendor/sqlite3/sqlite3.c:107741 #1 0x7f5e52498de2 in resolveExprStep vendor/sqlite3/sqlite3.c:108182 #2 0x7f5e52476ab4 in sqlite3WalkExprNN vendor/sqlite3/sqlite3.c:106871 #3 0x7f5e52476ffc in sqlite3WalkExpr vendor/sqlite3/sqlite3.c:106901 #4 0x7f5e52476ffc in sqlite3WalkExprList vendor/sqlite3/sqlite3.c:106913 #5 0x7f5e52476c55 in sqlite3WalkExprNN vendor/sqlite3/sqlite3.c:106887 #6 0x7f5e52476b66 in sqlite3WalkExprNN vendor/sqlite3/sqlite3.c:106875 #7 0x7f5e52476b66 in sqlite3WalkExprNN vendor/sqlite3/sqlite3.c:106875 #8 0x7f5e524836dc in sqlite3ResolveExprNames vendor/sqlite3/sqlite3.c:109240 #9 0x7f5e524a55bb in resolveSelectStep vendor/sqlite3/sqlite3.c:109062 #10 0x7f5e524760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #11 0x7f5e526095d3 in sqlite3ResolveSelectNames vendor/sqlite3/sqlite3.c:109330 #12 0x7f5e526095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150216 #13 0x7f5e526095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #14 0x7f5e526181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #15 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #16 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #17 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #18 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #19 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #20 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #21 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #22 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #23 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #24 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #25 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #26 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #27 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #28 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #29 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #30 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #31 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #32 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #33 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #34 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #35 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #36 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #37 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #38 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #39 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #40 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #41 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #42 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #43 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #44 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #45 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #46 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #47 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #48 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #49 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #54 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #55 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #56 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #57 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #58 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #59 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #62 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #63 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #68 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #69 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #70 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #71 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #72 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #73 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #74 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #75 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #76 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #77 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #81 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #82 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #83 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #84 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #85 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #86 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #87 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #88 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #89 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #90 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #93 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #94 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #95 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #96 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #97 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #98 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #99 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #100 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #101 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #102 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #103 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #104 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #105 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #110 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #111 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #112 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #113 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #114 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #115 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #116 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #117 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #118 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #119 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #120 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #121 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #122 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #123 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #124 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #125 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #126 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #127 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #128 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #129 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #130 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #131 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #132 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #133 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #134 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #135 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:109067:35: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e524a70de in resolveSelectStep vendor/sqlite3/sqlite3.c:109067 #1 0x7f5e524760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #2 0x7f5e526095d3 in sqlite3ResolveSelectNames vendor/sqlite3/sqlite3.c:109330 #3 0x7f5e526095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150216 #4 0x7f5e526095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #5 0x7f5e526181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #6 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #7 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #8 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #9 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #10 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #11 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #12 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #13 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #14 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #15 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #16 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #17 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #18 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #19 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #20 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #21 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #25 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #26 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #31 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #32 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #33 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #34 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #35 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #36 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #37 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #38 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #39 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #40 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #41 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #42 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #43 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #44 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #45 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #46 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #47 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #50 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #51 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #52 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #53 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #54 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #55 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #56 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #57 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #58 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #59 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #60 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #61 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #62 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #63 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #64 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #65 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #66 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #67 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #68 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #69 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #70 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #71 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #72 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #73 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #74 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #75 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #76 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #77 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #78 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #79 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #83 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #84 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #85 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #86 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #87 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #88 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #89 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #90 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #93 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #94 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #102 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #103 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #104 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #109 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #110 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #111 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #112 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #113 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #114 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #115 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #116 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #117 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #118 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #119 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #120 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #121 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #122 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #123 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #124 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #125 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #126 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:145627:48: runtime error: index 1 out of bounds for type 'SrcItem [1]' #0 0x7f5e525cb64e in columnTypeImpl vendor/sqlite3/sqlite3.c:145627 #1 0x7f5e525d9c69 in generateColumnTypes vendor/sqlite3/sqlite3.c:145775 #2 0x7f5e525d9c69 in sqlite3GenerateColumnNames vendor/sqlite3/sqlite3.c:145874 #3 0x7f5e526194f6 in sqlite3Select vendor/sqlite3/sqlite3.c:151190 #4 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #5 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #6 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #7 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #8 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #9 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #10 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #11 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #12 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #13 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #14 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #15 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #16 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #17 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #18 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #19 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #25 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #26 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #27 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #28 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #29 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #30 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #31 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #36 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #37 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #38 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #43 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #44 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #45 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #50 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #51 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #52 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #53 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #54 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #57 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #58 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #59 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #64 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #65 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #66 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #70 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #71 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #72 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #73 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #76 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #77 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #81 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #82 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #83 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #84 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #89 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #90 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #91 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #92 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #93 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #94 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #95 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #96 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #97 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #98 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #99 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #100 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #101 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #102 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #103 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #104 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #105 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #106 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #111 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #112 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #113 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #114 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #115 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #116 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #117 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #118 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #119 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #120 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #121 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #122 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #124 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:145629:29: runtime error: index 1 out of bounds for type 'SrcItem [1]' #0 0x7f5e525cc019 in columnTypeImpl vendor/sqlite3/sqlite3.c:145629 #1 0x7f5e525d9c69 in generateColumnTypes vendor/sqlite3/sqlite3.c:145775 #2 0x7f5e525d9c69 in sqlite3GenerateColumnNames vendor/sqlite3/sqlite3.c:145874 #3 0x7f5e526194f6 in sqlite3Select vendor/sqlite3/sqlite3.c:151190 #4 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #5 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #6 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #7 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #8 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #9 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #10 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #11 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #12 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #13 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #14 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #15 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #16 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #17 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #18 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #19 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #25 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #26 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #27 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #28 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #29 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #30 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #31 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #36 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #37 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #38 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #43 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #44 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #45 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #50 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #51 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #52 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #53 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #54 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #57 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #58 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #59 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #64 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #65 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #66 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #70 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #71 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #72 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #73 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #76 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #77 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #81 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #82 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #83 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #84 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #89 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #90 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #91 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #92 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #93 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #94 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #95 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #96 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #97 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #98 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #99 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #100 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #101 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #102 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #103 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #104 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #105 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #106 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #111 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #112 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #113 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #114 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #115 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #116 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #117 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #118 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #119 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #120 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #121 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #122 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #124 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:145630:26: runtime error: index 1 out of bounds for type 'SrcItem [1]' #0 0x7f5e525cbfa4 in columnTypeImpl vendor/sqlite3/sqlite3.c:145630 #1 0x7f5e525d9c69 in generateColumnTypes vendor/sqlite3/sqlite3.c:145775 #2 0x7f5e525d9c69 in sqlite3GenerateColumnNames vendor/sqlite3/sqlite3.c:145874 #3 0x7f5e526194f6 in sqlite3Select vendor/sqlite3/sqlite3.c:151190 #4 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #5 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #6 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #7 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #8 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #9 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #10 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #11 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #12 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #13 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #14 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #15 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #16 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #17 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #18 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #19 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #25 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #26 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #27 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #28 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #29 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #30 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #31 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #36 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #37 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #38 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #43 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #44 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #45 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #50 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #51 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #52 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #53 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #54 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #57 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #58 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #59 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #64 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #65 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #66 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #70 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #71 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #72 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #73 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #76 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #77 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #81 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #82 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #83 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #84 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #89 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #90 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #91 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #92 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #93 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #94 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #95 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #96 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #97 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #98 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #99 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #100 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #101 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #102 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #103 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #104 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #105 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #106 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #111 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #112 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #113 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #114 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #115 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #116 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #117 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #118 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #119 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #120 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #121 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #122 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #124 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:151216:34: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e52621cf4 in sqlite3Select vendor/sqlite3/sqlite3.c:151216 #1 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #2 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #3 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #4 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #5 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #6 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #7 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #8 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #9 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #10 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #11 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #12 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #13 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #14 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #15 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #16 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #17 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #18 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #22 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #23 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #24 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #25 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #26 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #27 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #28 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #29 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #30 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #31 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #32 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #33 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #34 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #35 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #36 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #37 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #38 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #39 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #40 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #41 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #42 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #43 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #44 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #47 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #48 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #49 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #54 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #55 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #56 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #57 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #58 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #59 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #60 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #61 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #62 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #63 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #68 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #69 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #70 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #71 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #74 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #75 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #76 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #77 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #78 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #79 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #80 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #81 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #82 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #83 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #84 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #85 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #88 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #89 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #93 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #94 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #95 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #96 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #97 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #98 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #99 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #100 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #101 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #102 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #103 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #104 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #105 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #106 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #107 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #108 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #109 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #110 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #111 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #112 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #113 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #114 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #115 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #116 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #117 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #118 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #119 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #120 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:151440:34: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e52623911 in sqlite3Select vendor/sqlite3/sqlite3.c:151440 #1 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #2 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #3 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #4 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #5 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #6 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #7 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #8 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #9 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #10 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #11 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #12 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #13 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #14 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #15 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #16 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #17 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #18 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #22 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #23 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #24 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #25 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #26 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #27 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #28 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #29 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #30 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #31 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #32 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #33 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #34 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #35 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #36 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #37 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #38 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #39 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #40 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #41 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #42 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #43 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #44 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #47 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #48 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #49 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #54 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #55 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #56 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #57 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #58 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #59 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #60 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #61 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #62 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #63 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #68 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #69 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #70 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #71 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #74 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #75 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #76 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #77 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #78 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #79 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #80 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #81 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #82 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #83 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #84 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #85 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #88 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #89 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #93 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #94 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #95 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #96 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #97 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #98 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #99 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #100 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #101 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #102 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #103 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #104 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #105 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #106 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #107 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #108 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #109 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #110 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #111 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #112 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #113 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #114 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #115 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #116 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #117 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #118 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #119 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #120 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:169816:39: runtime error: index 1 out of bounds for type 'SrcItem [1]' #0 0x7f5e526e260e in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:169816 #1 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #9 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #10 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #11 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #12 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #13 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #14 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #15 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #16 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #17 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #27 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #28 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #29 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #43 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #55 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #56 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #57 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #62 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #63 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #64 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #69 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #70 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #71 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #81 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #82 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #98 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #115 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #116 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #117 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #118 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #119 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #120 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:169817:51: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e526e295e in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:169817 #1 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #9 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #10 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #11 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #12 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #13 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #14 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #15 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #16 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #17 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #27 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #28 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #29 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #43 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #55 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #56 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #57 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #62 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #63 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #64 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #69 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #70 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #71 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #81 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #82 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #98 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #115 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #116 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #117 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #118 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #119 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #120 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:167977:31: runtime error: index 3 out of bounds for type 'SrcItem [1]' #0 0x7f5e526c9ac3 in whereLoopAddAll vendor/sqlite3/sqlite3.c:167977 #1 0x7f5e526da34e in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:169923 #2 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #3 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #10 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #11 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #12 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #13 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #14 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #15 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #16 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #17 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #18 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #24 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #25 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #26 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #27 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #28 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #29 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #30 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #35 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #36 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #37 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #42 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #43 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #44 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #52 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #53 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #56 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #57 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #58 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #70 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #71 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #72 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #76 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #80 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #81 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #82 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #83 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #90 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #91 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #92 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #93 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #98 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #99 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #114 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #115 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #116 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #117 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #118 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #119 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #120 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #121 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:169029:42: runtime error: index 1 out of bounds for type 'SrcItem [1]' #0 0x7f5e526cde1c in wherePathSolver.isra.0 vendor/sqlite3/sqlite3.c:169029 #1 0x7f5e526da5da in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:169948 #2 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #3 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #10 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #11 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #12 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #13 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #14 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #15 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #16 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #17 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #18 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #24 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #25 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #26 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #27 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #28 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #29 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #30 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #35 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #36 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #37 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #42 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #43 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #44 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #52 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #53 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #56 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #57 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #58 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #70 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #71 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #72 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #76 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #80 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #81 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #82 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #83 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #90 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #91 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #92 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #93 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #98 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #99 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #114 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #115 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #116 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #117 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #118 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #119 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #120 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #121 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:169397:22: runtime error: index 2 out of bounds for type 'WhereLevel [1]' #0 0x7f5e526d0764 in whereOmitNoopJoin.constprop.0 vendor/sqlite3/sqlite3.c:169397 #1 0x7f5e526deac6 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:170017 #2 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #3 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #10 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #11 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #12 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #13 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #14 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #15 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #16 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #17 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #18 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #24 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #25 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #26 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #27 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #28 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #29 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #30 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #35 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #36 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #37 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #42 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #43 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #44 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #52 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #53 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #56 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #57 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #58 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #70 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #71 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #72 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #76 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #80 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #81 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #82 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #83 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #90 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #91 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #92 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #93 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #98 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #99 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #114 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #115 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #116 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #117 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #118 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #119 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #120 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #121 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:169398:33: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e526d0e0b in whereOmitNoopJoin.constprop.0 vendor/sqlite3/sqlite3.c:169398 #1 0x7f5e526deac6 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:170017 #2 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #3 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #10 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #11 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #12 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #13 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #14 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #15 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #16 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #17 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #18 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #24 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #25 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #26 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #27 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #28 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #29 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #30 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #35 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #36 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #37 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #42 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #43 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #44 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #52 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #53 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #56 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #57 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #58 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #70 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #71 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #72 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #76 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #80 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #81 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #82 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #83 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #90 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #91 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #92 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #93 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #98 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #99 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #114 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #115 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #116 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #117 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #118 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #119 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #120 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #121 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:169470:33: runtime error: index 1 out of bounds for type 'WhereLevel [1]' #0 0x7f5e526d1b6a in whereCheckIfBloomFilterIsUseful vendor/sqlite3/sqlite3.c:169470 #1 0x7f5e526de09c in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:170028 #2 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #3 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #10 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #11 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #12 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #13 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #14 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #15 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #16 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #17 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #18 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #24 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #25 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #26 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #27 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #28 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #29 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #30 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #35 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #36 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #37 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #42 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #43 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #44 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #52 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #53 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #56 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #57 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #58 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #70 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #71 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #72 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #76 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #80 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #81 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #82 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #83 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #90 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #91 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #92 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #93 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #98 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #99 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #114 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #115 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #116 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #117 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #118 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #119 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #120 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #121 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:169472:42: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e526d1d2f in whereCheckIfBloomFilterIsUseful vendor/sqlite3/sqlite3.c:169472 #1 0x7f5e526de09c in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:170028 #2 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #3 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #10 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #11 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #12 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #13 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #14 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #15 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #16 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #17 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #18 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #24 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #25 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #26 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #27 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #28 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #29 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #30 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #35 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #36 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #37 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #42 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #43 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #44 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #52 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #53 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #56 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #57 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #58 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #70 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #71 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #72 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #76 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #80 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #81 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #82 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #83 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #90 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #91 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #92 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #93 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #98 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #99 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #114 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #115 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #116 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #117 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #118 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #119 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #120 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #121 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:170088:28: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e526e160c in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:170088 #1 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #9 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #10 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #11 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #12 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #13 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #14 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #15 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #16 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #17 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #27 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #28 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #29 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #43 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #55 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #56 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #57 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #62 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #63 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #64 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #69 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #70 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #71 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #81 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #82 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #98 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #115 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #116 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #117 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #118 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #119 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #120 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:159894:18: runtime error: index 1 out of bounds for type 'WhereLevel [1]' #0 0x7f5e5266eb8e in sqlite3WhereCodeOneLoopStart vendor/sqlite3/sqlite3.c:159894 #1 0x7f5e526dc650 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:170294 #2 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #3 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #10 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #11 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #12 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #13 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #14 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #15 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #16 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #17 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #18 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #24 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #25 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #26 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #27 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #28 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #29 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #30 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #35 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #36 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #37 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #42 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #43 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #44 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #52 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #53 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #56 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #57 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #58 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #70 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #71 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #72 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #76 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #80 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #81 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #82 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #83 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #90 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #91 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #92 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #93 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #98 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #99 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #114 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #115 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #116 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #117 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #118 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #119 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #120 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #121 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:159897:23: runtime error: index 1 out of bounds for type 'WhereLevel [1]' #0 0x7f5e5266ff46 in sqlite3WhereCodeOneLoopStart vendor/sqlite3/sqlite3.c:159897 #1 0x7f5e526dc650 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:170294 #2 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #3 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #10 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #11 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #12 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #13 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #14 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #15 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #16 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #17 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #18 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #24 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #25 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #26 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #27 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #28 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #29 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #30 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #35 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #36 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #37 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #42 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #43 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #44 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #52 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #53 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #56 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #57 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #58 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #70 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #71 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #72 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #76 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #80 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #81 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #82 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #83 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #90 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #91 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #92 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #93 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #98 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #99 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #114 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #115 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #116 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #117 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #118 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #119 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #120 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #121 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:170262:24: runtime error: index 2 out of bounds for type 'WhereLevel [1]' #0 0x7f5e526e1372 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:170262 #1 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #9 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #10 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #11 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #12 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #13 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #14 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #15 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #16 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #17 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #27 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #28 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #29 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #43 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #55 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #56 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #57 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #62 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #63 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #64 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #69 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #70 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #71 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #81 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #82 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #98 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #115 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #116 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #117 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #118 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #119 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #120 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:170264:24: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e526e1271 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:170264 #1 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #9 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #10 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #11 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #12 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #13 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #14 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #15 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #16 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #17 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #27 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #28 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #29 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #43 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #55 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #56 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #57 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #62 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #63 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #64 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #69 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #70 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #71 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #81 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #82 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #98 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #115 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #116 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #117 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #118 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #119 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #120 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:159841:34: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e526706db in sqlite3WhereCodeOneLoopStart vendor/sqlite3/sqlite3.c:159841 #1 0x7f5e526dc650 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:170294 #2 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #3 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #10 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #11 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #12 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #13 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #14 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #15 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #16 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #17 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #18 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #24 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #25 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #26 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #27 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #28 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #29 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #30 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #35 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #36 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #37 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #42 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #43 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #44 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #52 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #53 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #56 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #57 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #58 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #70 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #71 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #72 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #76 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #80 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #81 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #82 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #83 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #90 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #91 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #92 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #93 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #98 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #99 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #114 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #115 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #116 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #117 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #118 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #119 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #120 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #121 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:170360:24: runtime error: index 2 out of bounds for type 'WhereLevel [1]' #0 0x7f5e526e625b in sqlite3WhereEnd vendor/sqlite3/sqlite3.c:170360 #1 0x7f5e5261f73b in sqlite3Select vendor/sqlite3/sqlite3.c:151835 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #9 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #10 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #11 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #12 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #13 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #14 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #15 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #16 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #17 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #27 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #28 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #29 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #43 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #55 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #56 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #57 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #62 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #63 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #64 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #69 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #70 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #71 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #81 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #82 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #98 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #115 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #116 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #117 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #118 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #119 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #120 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:170486:37: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e526e701c in sqlite3WhereEnd vendor/sqlite3/sqlite3.c:170486 #1 0x7f5e5261f73b in sqlite3Select vendor/sqlite3/sqlite3.c:151835 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #9 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #10 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #11 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #12 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #13 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #14 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #15 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #16 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #17 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #27 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #28 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #29 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #43 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #55 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #56 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #57 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #62 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #63 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #64 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #69 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #70 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #71 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #81 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #82 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #98 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #115 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #116 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #117 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #118 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #119 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #120 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:170525:37: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e526e6280 in sqlite3WhereEnd vendor/sqlite3/sqlite3.c:170525 #1 0x7f5e5261f73b in sqlite3Select vendor/sqlite3/sqlite3.c:151835 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #9 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #10 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #11 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #12 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #13 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #14 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #15 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #16 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #17 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #27 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #28 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #29 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #43 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #55 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #56 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #57 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #62 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #63 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #64 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #69 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #70 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #71 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #81 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #82 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #98 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #115 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #116 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #117 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #118 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #119 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #120 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:148377:26: runtime error: index 1 out of bounds for type 'SrcItem [1]' #0 0x7f5e525f59f9 in flattenSubquery vendor/sqlite3/sqlite3.c:148377 #1 0x7f5e52618c2e in sqlite3Select vendor/sqlite3/sqlite3.c:151374 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #9 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #10 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #11 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #12 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #13 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #14 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #15 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #16 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #17 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #27 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #28 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #29 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #43 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #55 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #56 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #57 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #62 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #63 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #64 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #69 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #70 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #71 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #81 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #82 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #98 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #115 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #116 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #117 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #118 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #119 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #120 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:148379:30: runtime error: index 1 out of bounds for type 'SrcItem [1]' #0 0x7f5e525f5ad1 in flattenSubquery vendor/sqlite3/sqlite3.c:148379 #1 0x7f5e52618c2e in sqlite3Select vendor/sqlite3/sqlite3.c:151374 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #9 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #10 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #11 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #12 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #13 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #14 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #15 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #16 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #17 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #27 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #28 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #29 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #43 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #55 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #56 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #57 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #62 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #63 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #64 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #69 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #70 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #71 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #81 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #82 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #98 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #115 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #116 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #117 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #118 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #119 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #120 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:148371:32: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e525f5943 in flattenSubquery vendor/sqlite3/sqlite3.c:148371 #1 0x7f5e52618c2e in sqlite3Select vendor/sqlite3/sqlite3.c:151374 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #9 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #10 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #11 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #12 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #13 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #14 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #15 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #16 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #17 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #27 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #28 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #29 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #43 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #55 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #56 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #57 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #62 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #63 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #64 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #69 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #70 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #71 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #81 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #82 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #98 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #115 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #116 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #117 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #118 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #119 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #120 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:148380:25: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e525f58d8 in flattenSubquery vendor/sqlite3/sqlite3.c:148380 #1 0x7f5e52618c2e in sqlite3Select vendor/sqlite3/sqlite3.c:151374 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #9 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #10 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #11 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #12 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #13 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #14 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #15 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #16 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #17 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #27 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #28 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #29 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #43 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #55 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #56 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #57 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #62 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #63 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #64 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #69 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #70 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #71 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #81 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #82 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #98 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #115 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #116 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #117 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #118 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #119 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #120 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:147665:51: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e5295f69d in substExprList.part.0.lto_priv.0 vendor/sqlite3/sqlite3.c:147665 #1 0x7f5e5295f741 in substExprList vendor/sqlite3/sqlite3.c:147663 #2 0x7f5e5295f741 in substSelect.part.0.lto_priv.0 vendor/sqlite3/sqlite3.c:147678 #3 0x7f5e525f47ab in substSelect vendor/sqlite3/sqlite3.c:147676 #4 0x7f5e525f47ab in flattenSubquery vendor/sqlite3/sqlite3.c:148436 #5 0x7f5e52618c2e in sqlite3Select vendor/sqlite3/sqlite3.c:151374 #6 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #7 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #8 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #9 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #10 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #11 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #12 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #13 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #14 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #15 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #16 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #17 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #18 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #19 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #20 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #21 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #25 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #26 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #31 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #32 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #33 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #34 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #35 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #36 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #37 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #38 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #39 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #40 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #41 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #42 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #43 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #44 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #45 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #46 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #47 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #50 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #51 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #52 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #53 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #54 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #55 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #56 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #57 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #58 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #59 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #60 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #61 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #62 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #63 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #64 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #65 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #66 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #67 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #68 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #69 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #70 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #71 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #72 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #73 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #74 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #75 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #76 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #77 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #78 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #79 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #83 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #84 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #85 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #86 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #87 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #88 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #89 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #90 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #93 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #94 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #102 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #103 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #104 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #109 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #110 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #111 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #112 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #113 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #114 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #115 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #116 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #117 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #118 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #119 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #120 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #121 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #122 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #123 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #124 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #125 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #126 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:147665:13: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e5295f6b9 in substExprList.part.0.lto_priv.0 vendor/sqlite3/sqlite3.c:147665 #1 0x7f5e5295f741 in substExprList vendor/sqlite3/sqlite3.c:147663 #2 0x7f5e5295f741 in substSelect.part.0.lto_priv.0 vendor/sqlite3/sqlite3.c:147678 #3 0x7f5e525f47ab in substSelect vendor/sqlite3/sqlite3.c:147676 #4 0x7f5e525f47ab in flattenSubquery vendor/sqlite3/sqlite3.c:148436 #5 0x7f5e52618c2e in sqlite3Select vendor/sqlite3/sqlite3.c:151374 #6 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #7 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #8 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #9 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #10 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #11 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #12 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #13 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #14 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #15 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #16 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #17 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #18 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #19 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #20 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #21 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #25 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #26 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #31 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #32 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #33 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #34 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #35 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #36 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #37 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #38 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #39 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #40 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #41 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #42 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #43 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #44 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #45 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #46 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #47 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #50 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #51 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #52 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #53 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #54 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #55 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #56 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #57 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #58 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #59 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #60 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #61 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #62 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #63 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #64 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #65 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #66 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #67 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #68 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #69 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #70 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #71 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #72 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #73 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #74 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #75 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #76 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #77 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #78 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #79 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #83 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #84 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #85 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #86 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #87 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #88 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #89 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #90 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #93 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #94 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #102 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #103 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #104 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #109 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #110 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #111 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #112 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #113 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #114 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #115 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #116 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #117 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #118 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #119 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #120 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #121 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #122 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #123 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #124 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #125 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #126 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:148458:45: runtime error: index 2 out of bounds for type 'SrcItem [1]' #0 0x7f5e525f575c in flattenSubquery vendor/sqlite3/sqlite3.c:148458 #1 0x7f5e52618c2e in sqlite3Select vendor/sqlite3/sqlite3.c:151374 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #9 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #10 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #11 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #12 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #13 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #14 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #15 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #16 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #17 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #27 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #28 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #29 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #43 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #55 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #56 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #57 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #62 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #63 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #64 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #69 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #70 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #71 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #81 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #82 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #98 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #115 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #116 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #117 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #118 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #119 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #120 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:145291:19: runtime error: index 1 out of bounds for type 'CollSeq *[1]' #0 0x7f5e525d2188 in sqlite3KeyInfoFromExprList vendor/sqlite3/sqlite3.c:145291 #1 0x7f5e5261e412 in sqlite3Select vendor/sqlite3/sqlite3.c:151756 #2 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #9 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #10 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #11 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #12 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #13 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #14 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #15 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #16 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #17 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #27 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #28 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #29 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #43 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #55 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #56 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #57 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #62 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #63 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #64 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #69 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #70 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #71 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #72 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #79 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #80 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #81 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #82 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #83 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #84 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #98 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #99 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #100 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #113 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #114 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #115 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #116 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #117 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #118 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #119 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #120 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #121 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:162346:22: runtime error: index 1 out of bounds for type 'SrcItem [1]' #0 0x7f5e5267bf50 in exprMightBeIndexed vendor/sqlite3/sqlite3.c:162346 #1 0x7f5e5268608d in exprAnalyze vendor/sqlite3/sqlite3.c:162486 #2 0x7f5e526d9d64 in sqlite3WhereExprAnalyze vendor/sqlite3/sqlite3.c:163133 #3 0x7f5e526d9d64 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:169832 #4 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #5 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #6 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #7 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #8 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #9 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #10 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #11 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #12 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #13 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #14 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #15 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #16 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #17 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #18 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #19 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #20 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #24 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #25 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #26 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #27 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #28 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #29 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #30 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #31 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #32 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #33 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #34 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #35 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #36 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #37 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #38 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #39 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #40 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #41 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #42 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #43 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #44 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #45 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #46 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #49 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #50 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #51 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #52 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #53 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #54 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #55 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #56 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #57 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #58 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #59 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #60 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #61 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #62 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #63 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #64 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #65 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #66 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #67 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #68 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #69 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #70 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #71 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #72 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #73 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #74 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #75 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #76 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #77 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #78 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #79 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #80 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #81 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #82 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #83 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #84 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #85 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #86 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #87 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #90 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #91 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #92 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #93 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #94 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #95 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #96 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #97 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #98 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #99 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #100 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #101 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #102 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #103 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #104 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #105 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #106 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #107 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #108 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #109 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #110 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #111 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #112 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #113 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #114 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #115 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #116 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #117 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #118 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #119 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #120 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #121 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #122 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #123 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #124 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #125 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:166716:57: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e526c617c in indexMightHelpWithOrderBy vendor/sqlite3/sqlite3.c:166716 #1 0x7f5e526c617c in whereLoopAddBtree vendor/sqlite3/sqlite3.c:167185 #2 0x7f5e526c9270 in whereLoopAddAll vendor/sqlite3/sqlite3.c:168031 #3 0x7f5e526da34e in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:169923 #4 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #5 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #6 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #7 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #8 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #9 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #10 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #11 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #12 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #13 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #14 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #15 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #16 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #17 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #18 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #19 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #20 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #24 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #25 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #26 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #27 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #28 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #29 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #30 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #31 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #32 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #33 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #34 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #35 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #36 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #37 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #38 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #39 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #40 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #41 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #42 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #43 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #44 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #45 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #46 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #49 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #50 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #51 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #52 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #53 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #54 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #55 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #56 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #57 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #58 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #59 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #60 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #61 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #62 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #63 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #64 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #65 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #66 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #67 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #68 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #69 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #70 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #71 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #72 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #73 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #74 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #75 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #76 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #77 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #78 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #79 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #80 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #81 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #82 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #83 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #84 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #85 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #86 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #87 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #90 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #91 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #92 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #93 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #94 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #95 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #96 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #97 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #98 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #99 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #100 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #101 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #102 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #103 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #104 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #105 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #106 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #107 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #108 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #109 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #110 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #111 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #112 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #113 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #114 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #115 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #116 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #117 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #118 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #119 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #120 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #121 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #122 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #123 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #124 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #125 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:169150:29: runtime error: index 1 out of bounds for type 'WhereLevel [1]' #0 0x7f5e526cfa24 in whereInterstageHeuristic vendor/sqlite3/sqlite3.c:169150 #1 0x7f5e526da678 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:169951 #2 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #3 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #10 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #11 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #12 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #13 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #14 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #15 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #16 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #17 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #18 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #24 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #25 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #26 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #27 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #28 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #29 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #30 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #35 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #36 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #37 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #42 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #43 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #44 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #52 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #53 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #56 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #57 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #58 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #70 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #71 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #72 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #76 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #80 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #81 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #82 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #83 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #90 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #91 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #92 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #93 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #98 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #99 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #114 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #115 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #116 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #117 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #118 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #119 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #120 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #121 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:168248:31: runtime error: index 1 out of bounds for type 'SrcItem [1]' #0 0x7f5e526bd8d6 in wherePathSatisfiesOrderBy vendor/sqlite3/sqlite3.c:168248 #1 0x7f5e526cb0f3 in wherePathSolver.isra.0 vendor/sqlite3/sqlite3.c:168824 #2 0x7f5e526da6e7 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:169952 #3 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #4 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #5 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #6 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #7 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #8 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #9 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #10 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #11 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #12 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #13 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #14 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #15 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #16 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #17 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #18 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #19 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #25 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #26 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #27 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #28 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #29 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #30 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #31 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #36 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #37 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #38 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #43 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #44 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #45 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #50 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #51 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #52 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #53 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #54 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #57 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #58 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #59 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #64 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #65 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #66 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #70 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #71 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #72 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #73 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #76 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #77 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #81 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #82 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #83 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #84 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #89 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #90 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #91 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #92 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #93 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #94 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #95 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #96 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #97 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #98 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #99 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #100 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #101 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #102 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #103 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #104 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #105 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #106 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #111 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #112 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #113 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #114 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #115 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #116 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #117 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #118 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #119 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #120 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #121 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #122 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #124 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:168257:60: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e526bd4a7 in wherePathSatisfiesOrderBy vendor/sqlite3/sqlite3.c:168257 #1 0x7f5e526cb0f3 in wherePathSolver.isra.0 vendor/sqlite3/sqlite3.c:168824 #2 0x7f5e526da6e7 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:169952 #3 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #4 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #5 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #6 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #7 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #8 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #9 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #10 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #11 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #12 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #13 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #14 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #15 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #16 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #17 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #18 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #19 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #25 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #26 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #27 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #28 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #29 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #30 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #31 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #36 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #37 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #38 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #43 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #44 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #45 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #50 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #51 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #52 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #53 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #54 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #57 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #58 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #59 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #64 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #65 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #66 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #70 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #71 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #72 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #73 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #76 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #77 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #81 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #82 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #83 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #84 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #89 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #90 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #91 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #92 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #93 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #94 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #95 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #96 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #97 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #98 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #99 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #100 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #101 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #102 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #103 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #104 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #105 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #106 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #111 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #112 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #113 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #114 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #115 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #116 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #117 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #118 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #119 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #120 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #121 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #122 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #124 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:168399:64: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e526bd4d3 in wherePathSatisfiesOrderBy vendor/sqlite3/sqlite3.c:168399 #1 0x7f5e526cb0f3 in wherePathSolver.isra.0 vendor/sqlite3/sqlite3.c:168824 #2 0x7f5e526da6e7 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:169952 #3 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #4 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #5 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #6 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #7 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #8 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #9 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #10 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #11 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #12 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #13 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #14 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #15 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #16 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #17 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #18 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #19 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #25 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #26 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #27 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #28 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #29 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #30 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #31 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #36 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #37 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #38 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #43 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #44 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #45 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #50 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #51 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #52 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #53 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #54 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #57 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #58 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #59 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #64 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #65 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #66 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #70 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #71 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #72 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #73 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #76 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #77 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #81 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #82 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #83 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #84 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #89 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #90 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #91 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #92 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #93 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #94 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #95 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #96 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #97 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #98 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #99 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #100 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #101 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #102 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #103 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #104 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #105 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #106 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #111 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #112 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #113 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #114 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #115 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #116 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #117 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #118 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #119 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #120 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #121 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #122 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #124 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:159895:18: runtime error: index 1 out of bounds for type 'WhereLevel [1]' #0 0x7f5e5266ea3d in sqlite3WhereCodeOneLoopStart vendor/sqlite3/sqlite3.c:159895 #1 0x7f5e526dc650 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:170294 #2 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #3 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #10 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #11 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #12 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #13 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #14 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #15 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #16 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #17 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #18 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #24 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #25 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #26 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #27 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #28 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #29 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #30 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #35 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #36 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #37 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #42 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #43 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #44 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #52 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #53 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #56 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #57 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #58 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #70 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #71 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #72 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #76 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #80 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #81 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #82 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #83 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #90 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #91 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #92 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #93 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #94 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #95 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #96 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #97 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #98 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #99 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #114 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #115 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #116 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #117 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #118 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #119 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #120 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #121 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #122 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:89809:34: runtime error: index 2 out of bounds for type 'CollSeq *[1]' #0 0x7f5e52406291 in sqlite3VdbeRecordCompareWithSkip vendor/sqlite3/sqlite3.c:89809 #1 0x7f5e5238245b in sqlite3BtreeIndexMoveto vendor/sqlite3/sqlite3.c:76739 #2 0x7f5e52434e45 in sqlite3VdbeExec vendor/sqlite3/sqlite3.c:98726 #3 0x7f5e52450e4d in sqlite3Step vendor/sqlite3/sqlite3.c:91376 #4 0x7f5e52450e4d in sqlite3_step vendor/sqlite3/sqlite3.c:91437 #5 0x7f5e52253af9 in SqliteResultImpl::step_run() /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:341 #6 0x7f5e522570aa in SqliteResultImpl::step() /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:334 #7 0x7f5e522570aa in SqliteResultImpl::fetch_rows(int, int&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:322 #8 0x7f5e522570aa in SqliteResultImpl::fetch(int) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:158 #9 0x7f5e522570aa in DbResult::fetch(int) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/DbResult.cpp:56 #10 0x7f5e522570aa in result_fetch(DbResult*, int) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:27 #11 0x7f5e522570aa in _RSQLite_result_fetch /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:94 #12 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #13 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #14 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #15 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #16 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #17 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #18 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #19 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #20 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #21 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #22 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #23 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #24 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #25 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #26 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #27 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #28 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #29 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #30 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #31 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #32 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #33 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #34 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #35 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #36 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #37 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #38 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #39 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #40 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #41 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #42 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #43 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #44 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #45 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #46 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #47 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #48 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #49 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #50 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #51 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #52 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #53 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #54 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #55 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #56 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #57 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #58 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #59 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #60 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #61 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #62 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #63 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #64 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #65 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #66 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #67 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #68 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #69 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #70 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #71 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #72 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #73 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #74 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #75 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #76 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #77 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #78 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #79 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #80 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #81 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #82 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #83 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #84 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #85 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #86 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #87 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #88 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #89 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #90 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #91 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #92 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #93 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #94 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #105 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #106 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #111 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #112 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #113 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #114 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #115 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #116 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #117 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #118 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:89815:43: runtime error: index 2 out of bounds for type 'CollSeq *[1]' #0 0x7f5e52405cee in sqlite3VdbeRecordCompareWithSkip vendor/sqlite3/sqlite3.c:89815 #1 0x7f5e5238245b in sqlite3BtreeIndexMoveto vendor/sqlite3/sqlite3.c:76739 #2 0x7f5e52434e45 in sqlite3VdbeExec vendor/sqlite3/sqlite3.c:98726 #3 0x7f5e52450e4d in sqlite3Step vendor/sqlite3/sqlite3.c:91376 #4 0x7f5e52450e4d in sqlite3_step vendor/sqlite3/sqlite3.c:91437 #5 0x7f5e52253af9 in SqliteResultImpl::step_run() /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:341 #6 0x7f5e522570aa in SqliteResultImpl::step() /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:334 #7 0x7f5e522570aa in SqliteResultImpl::fetch_rows(int, int&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:322 #8 0x7f5e522570aa in SqliteResultImpl::fetch(int) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:158 #9 0x7f5e522570aa in DbResult::fetch(int) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/DbResult.cpp:56 #10 0x7f5e522570aa in result_fetch(DbResult*, int) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:27 #11 0x7f5e522570aa in _RSQLite_result_fetch /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:94 #12 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #13 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #14 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #15 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #16 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #17 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #18 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #19 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #20 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #21 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #22 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #23 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #24 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #25 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #26 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #27 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #28 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #29 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #30 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #31 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #32 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #33 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #34 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #35 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #36 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #37 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #38 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #39 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #40 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #41 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #42 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #43 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #44 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #45 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #46 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #47 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #48 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #49 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #50 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #51 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #52 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #53 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #54 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #55 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #56 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #57 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #58 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #59 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #60 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #61 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #62 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #63 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #64 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #65 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #66 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #67 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #68 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #69 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #70 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #71 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #72 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #73 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #74 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #75 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #76 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #77 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #78 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #79 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #80 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #81 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #82 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #83 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #84 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #85 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #86 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #87 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #88 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #89 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #90 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #91 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #92 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #93 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #94 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #105 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #106 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #111 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #112 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #113 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #114 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #115 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #116 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #117 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #118 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:110207:24: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e52959460 in heightOfExprList.part.0.lto_priv.0 vendor/sqlite3/sqlite3.c:110207 #1 0x7f5e5248a42a in heightOfExprList vendor/sqlite3/sqlite3.c:110204 #2 0x7f5e5248a42a in exprSetHeight vendor/sqlite3/sqlite3.c:110241 #3 0x7f5e5248ae2f in sqlite3ExprSetHeightAndFlags vendor/sqlite3/sqlite3.c:110257 #4 0x7f5e5248ae2f in sqlite3ExprSetHeightAndFlags vendor/sqlite3/sqlite3.c:110255 #5 0x7f5e5270b84a in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178460 #6 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #7 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #8 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #9 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #10 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #11 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #12 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #13 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #14 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #15 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #16 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #17 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #18 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #19 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #20 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #24 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #25 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #26 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #27 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #28 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #29 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #30 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #31 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #32 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #33 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #34 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #35 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #36 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #37 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #38 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #39 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #40 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #41 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #42 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #43 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #44 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #45 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #46 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #49 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #50 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #51 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #52 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #53 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #54 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #55 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #56 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #57 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #58 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #59 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #60 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #61 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #62 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #63 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #64 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #65 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #66 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #67 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #68 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #69 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #70 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #71 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #72 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #73 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #74 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #75 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #76 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #77 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #78 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #79 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #80 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #81 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #82 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #83 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #84 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #85 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #86 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #87 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #90 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #91 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #92 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #93 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #94 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #95 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #96 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #97 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #98 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #99 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #100 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #101 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #102 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #103 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #104 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #105 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #106 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #107 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #108 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #109 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #110 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #111 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #112 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #113 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #114 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #115 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #116 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #117 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #118 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #119 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #120 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #121 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #122 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #123 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #124 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #125 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:111673:28: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e5248a7e0 in sqlite3ExprListFlags vendor/sqlite3/sqlite3.c:111673 #1 0x7f5e5248a7e0 in exprSetHeight vendor/sqlite3/sqlite3.c:110242 #2 0x7f5e5248ae2f in sqlite3ExprSetHeightAndFlags vendor/sqlite3/sqlite3.c:110257 #3 0x7f5e5248ae2f in sqlite3ExprSetHeightAndFlags vendor/sqlite3/sqlite3.c:110255 #4 0x7f5e5270b84a in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178460 #5 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #6 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #7 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #8 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #9 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #10 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #11 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #12 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #13 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #14 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #15 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #16 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #17 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #18 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #19 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #25 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #26 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #27 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #28 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #29 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #30 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #31 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #36 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #37 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #38 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #43 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #44 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #45 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #50 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #51 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #52 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #53 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #54 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #57 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #58 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #59 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #64 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #65 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #66 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #70 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #71 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #72 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #73 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #76 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #77 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #81 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #82 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #83 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #84 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #89 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #90 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #91 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #92 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #93 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #94 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #95 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #96 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #97 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #98 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #99 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #100 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #101 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #102 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #103 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #104 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #105 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #106 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #111 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #112 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #113 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #114 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #115 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #116 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #117 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #118 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #119 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #120 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #121 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #122 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #124 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:113407:48: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e524cddde in sqlite3ExprCodeIN vendor/sqlite3/sqlite3.c:113407 #1 0x7f5e524d0f39 in sqlite3ExprIfFalse vendor/sqlite3/sqlite3.c:115515 #2 0x7f5e52666e39 in sqlite3WhereCodeOneLoopStart vendor/sqlite3/sqlite3.c:161029 #3 0x7f5e526dc650 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:170294 #4 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #5 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #6 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #7 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #8 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #9 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #10 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #11 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #12 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #13 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #14 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #15 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #16 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #17 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #18 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #19 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #20 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #21 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #22 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #23 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #24 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #25 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #26 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #27 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #28 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #29 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #30 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #31 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #32 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #33 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #34 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #35 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #36 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #37 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #38 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #39 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #40 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #41 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #42 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #43 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #44 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #45 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #46 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #49 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #50 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #51 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #52 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #53 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #54 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #55 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #56 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #57 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #58 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #59 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #60 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #61 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #62 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #63 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #64 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #65 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #66 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #67 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #68 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #69 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #70 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #71 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #72 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #73 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #74 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #75 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #76 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #77 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #78 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #79 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #80 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #81 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #82 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #83 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #84 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #85 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #86 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #87 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #88 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #89 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #90 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #91 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #92 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #93 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #94 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #95 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #96 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #97 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #98 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #99 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #100 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #101 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #102 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #103 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #104 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #105 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #106 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #107 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #108 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #109 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #110 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #111 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #112 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #113 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #114 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #115 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #116 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #117 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #118 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #119 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #120 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #121 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #122 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #123 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #124 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #125 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:165511:54: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e526acb0a in whereInScanEst vendor/sqlite3/sqlite3.c:165511 #1 0x7f5e526acb0a in whereLoopAddBtreeIndex vendor/sqlite3/sqlite3.c:166542 #2 0x7f5e526c1e6d in whereLoopAddBtree vendor/sqlite3/sqlite3.c:167327 #3 0x7f5e526c9270 in whereLoopAddAll vendor/sqlite3/sqlite3.c:168031 #4 0x7f5e526da34e in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:169923 #5 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #6 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #7 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #8 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #9 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #10 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #11 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #12 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #13 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #14 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #15 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #16 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #17 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #18 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #19 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #20 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #21 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #25 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #26 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #31 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #32 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #33 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #34 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #35 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #36 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #37 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #38 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #39 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #40 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #41 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #42 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #43 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #44 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #45 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #46 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #47 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #50 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #51 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #52 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #53 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #54 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #55 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #56 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #57 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #58 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #59 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #60 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #61 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #62 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #63 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #64 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #65 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #66 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #67 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #68 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #69 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #70 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #71 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #72 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #73 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #74 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #75 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #76 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #77 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #78 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #79 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #83 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #84 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #85 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #86 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #87 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #88 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #89 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #90 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #93 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #94 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #102 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #103 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #104 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #109 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #110 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #111 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #112 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #113 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #114 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #115 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #116 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #117 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #118 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #119 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #120 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #121 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #122 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #123 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #124 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #125 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #126 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:168434:40: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e526be552 in wherePathSatisfiesOrderBy vendor/sqlite3/sqlite3.c:168434 #1 0x7f5e526cb0f3 in wherePathSolver.isra.0 vendor/sqlite3/sqlite3.c:168824 #2 0x7f5e526da6e7 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:169952 #3 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #4 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #5 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #6 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #7 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #8 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #9 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #10 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #11 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #12 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #13 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #14 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #15 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #16 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #17 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #18 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #19 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #25 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #26 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #27 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #28 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #29 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #30 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #31 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #36 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #37 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #38 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #43 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #44 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #45 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #50 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #51 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #52 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #53 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #54 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #57 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #58 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #59 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #64 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #65 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #66 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #70 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #71 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #72 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #73 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #76 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #77 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #81 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #82 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #83 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #84 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #89 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #90 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #91 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #92 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #93 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #94 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #95 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #96 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #97 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #98 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #99 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #100 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #101 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #102 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #103 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #104 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #105 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #106 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #111 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #112 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #113 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #114 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #115 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #116 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #117 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #118 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #119 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #120 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #121 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #122 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #124 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:168439:36: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f5e526bed96 in wherePathSatisfiesOrderBy vendor/sqlite3/sqlite3.c:168439 #1 0x7f5e526cb0f3 in wherePathSolver.isra.0 vendor/sqlite3/sqlite3.c:168824 #2 0x7f5e526da6e7 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:169952 #3 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #4 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #5 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #6 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #7 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #8 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #9 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #10 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #11 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #12 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #13 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #14 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #15 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #16 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #17 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #18 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #19 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #25 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #26 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #27 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #28 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #29 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #30 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #31 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #36 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #37 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #38 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #43 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #44 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #45 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #50 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #51 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #52 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #53 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #54 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #57 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #58 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #59 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #64 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #65 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #66 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #70 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #71 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #72 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #73 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #76 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #77 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #81 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #82 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #83 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #84 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #89 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #90 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #91 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #92 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #93 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #94 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #95 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #96 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #97 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #98 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #99 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #100 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #101 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #102 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #103 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #104 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #105 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #106 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #111 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #112 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #113 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #114 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #115 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #116 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #117 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #118 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #119 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #120 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #121 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #122 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #124 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) vendor/sqlite3/sqlite3.c:168474:24: runtime error: index 2 out of bounds for type 'ExprList_item [1]' #0 0x7f5e526bd528 in wherePathSatisfiesOrderBy vendor/sqlite3/sqlite3.c:168474 #1 0x7f5e526cb0f3 in wherePathSolver.isra.0 vendor/sqlite3/sqlite3.c:168824 #2 0x7f5e526da6e7 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:169952 #3 0x7f5e5261ae1b in sqlite3Select vendor/sqlite3/sqlite3.c:151779 #4 0x7f5e52707ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #5 0x7f5e52740521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #6 0x7f5e52740521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #7 0x7f5e525aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #8 0x7f5e525b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #9 0x7f5e52261595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #10 0x7f5e52261595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #11 0x7f5e52261595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #12 0x7f5e52261595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #13 0x7f5e52261595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #14 0x7f5e52261595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #15 0x7f5e52261595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #16 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #17 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #18 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #19 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #25 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #26 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #27 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #28 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #29 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #30 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #31 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #36 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #37 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #38 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #43 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #44 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #45 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #50 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #51 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #52 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #53 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #54 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #57 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #58 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #59 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #64 0x7f5e6cde0c7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #65 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #66 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #70 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #71 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #72 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #73 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #74 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #75 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #76 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #77 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #81 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #82 0x89fcc3 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3984 #83 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #84 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x86840c in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1187 #89 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #90 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #91 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #92 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #93 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #94 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #95 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #96 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #97 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #98 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #99 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #100 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #101 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #102 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #103 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #104 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #105 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #106 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #111 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #112 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #113 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #114 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #115 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #116 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #117 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #118 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #119 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #120 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #121 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #122 0x7f5e6fc38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #123 0x7f5e6fc3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #124 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 81ac5d208640ad2c0ea4b82c75c2cb3222da06bb) --- finished re-building ‘mega2rtutorial.Rmd’