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Type 'q()' to quit R. > library(testthat) > test_check("LowWAFOMSobol") Loading required package: LowWAFOMSobol vendor/sqlite3/sqlite3.c:111455:20: runtime error: index 2 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8c8ab741 in sqlite3ExprListAppend vendor/sqlite3/sqlite3.c:111455 #1 0x7f3e8ca014c8 in selectExpander vendor/sqlite3/sqlite3.c:150034 #2 0x7f3e8c8760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #3 0x7f3e8ca0946f in sqlite3SelectExpand vendor/sqlite3/sqlite3.c:150132 #4 0x7f3e8ca0946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150214 #5 0x7f3e8ca0946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #6 0x7f3e8ca181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #7 0x7f3e8cb07ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #8 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #9 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #10 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #11 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #12 0x7f3e8c98a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #13 0x7f3e8c98a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #14 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #15 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #16 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #17 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #18 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #19 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #20 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #21 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #22 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #23 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #24 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #25 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #26 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #27 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #28 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #29 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #30 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #31 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #36 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #37 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #38 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #39 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #40 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #41 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #42 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #43 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #44 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #45 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #46 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #47 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #48 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #49 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #54 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #55 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #56 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #57 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #58 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #59 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #62 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #63 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #68 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #69 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #70 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #71 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #72 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #73 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #74 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #75 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #76 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #77 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #81 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #82 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #83 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #84 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #88 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #89 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #90 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #93 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #94 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #102 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #103 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #104 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #105 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #114 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #115 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #116 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #117 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #118 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #119 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #120 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #121 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #122 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #123 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #124 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #125 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #126 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #127 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #128 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #129 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #130 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #131 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #132 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #133 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #134 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #135 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #136 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #137 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #138 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #139 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #140 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #141 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #142 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #143 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #144 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #145 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #146 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #147 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #148 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #149 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #150 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #151 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #152 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #153 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #154 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #155 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #156 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #157 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #158 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #159 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:150038:26: runtime error: index 2 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8ca034c7 in selectExpander vendor/sqlite3/sqlite3.c:150038 #1 0x7f3e8c8760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #2 0x7f3e8ca0946f in sqlite3SelectExpand vendor/sqlite3/sqlite3.c:150132 #3 0x7f3e8ca0946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150214 #4 0x7f3e8ca0946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #5 0x7f3e8ca181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #6 0x7f3e8cb07ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #7 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #8 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #9 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #10 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #11 0x7f3e8c98a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #12 0x7f3e8c98a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #13 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #14 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #15 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #16 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #17 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #18 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #19 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #20 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #21 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #22 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #23 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #24 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #25 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #26 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #27 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #28 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #29 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #30 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #31 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #32 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #33 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #34 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #35 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #36 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #37 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #38 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #39 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #40 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #41 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #42 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #43 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #44 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #45 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #46 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #47 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #48 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #49 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #50 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #51 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #52 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #53 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #54 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #55 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #56 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #57 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #58 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #59 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #60 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #61 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #62 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #63 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #64 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #65 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #66 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #67 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #68 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #69 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #70 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #71 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #72 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #73 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #74 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #75 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #76 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #80 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #81 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #82 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #83 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #84 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #85 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #86 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #87 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #88 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #89 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #90 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #91 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #92 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #93 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #94 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #95 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #96 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #97 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #98 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #99 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #100 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #101 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #102 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #103 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #104 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #107 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #108 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #109 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #110 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #111 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #112 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #113 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #114 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #115 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #116 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #117 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #118 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #119 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #120 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #121 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #122 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #123 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #124 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #125 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #126 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #127 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #128 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #129 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #130 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #131 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #132 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #133 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #134 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #135 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #136 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #137 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #138 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #139 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #140 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #141 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #142 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #143 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #144 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #145 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #146 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #147 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #148 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #149 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #150 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #151 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #152 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #153 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #154 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #155 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #156 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #157 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #158 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:111438:20: runtime error: index 4 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8c8ab2e3 in sqlite3ExprListAppendGrow vendor/sqlite3/sqlite3.c:111438 #1 0x7f3e8ca014c8 in selectExpander vendor/sqlite3/sqlite3.c:150034 #2 0x7f3e8c8760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #3 0x7f3e8ca0946f in sqlite3SelectExpand vendor/sqlite3/sqlite3.c:150132 #4 0x7f3e8ca0946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150214 #5 0x7f3e8ca0946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #6 0x7f3e8ca181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #7 0x7f3e8cb07ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #8 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #9 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #10 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #11 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #12 0x7f3e8c98a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #13 0x7f3e8c98a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #14 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #15 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #16 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #17 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #18 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #19 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #20 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #21 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #22 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #23 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #24 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #25 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #26 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #27 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #28 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #29 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #30 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #31 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #36 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #37 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #38 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #39 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #40 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #41 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #42 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #43 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #44 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #45 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #46 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #47 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #48 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #49 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #54 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #55 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #56 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #57 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #58 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #59 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #62 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #63 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #68 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #69 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #70 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #71 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #72 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #73 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #74 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #75 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #76 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #77 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #81 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #82 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #83 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #84 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #88 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #89 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #90 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #93 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #94 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #102 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #103 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #104 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #105 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #114 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #115 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #116 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #117 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #118 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #119 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #120 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #121 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #122 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #123 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #124 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #125 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #126 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #127 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #128 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #129 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #130 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #131 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #132 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #133 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #134 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #135 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #136 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #137 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #138 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #139 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #140 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #141 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #142 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #143 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #144 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #145 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #146 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #147 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #148 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #149 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #150 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #151 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #152 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #153 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #154 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #155 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #156 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #157 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #158 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #159 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:109277:27: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8c884a9c in sqlite3ResolveExprListNames vendor/sqlite3/sqlite3.c:109277 #1 0x7f3e8c8a53a1 in resolveSelectStep vendor/sqlite3/sqlite3.c:109027 #2 0x7f3e8c8760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #3 0x7f3e8ca095d3 in sqlite3ResolveSelectNames vendor/sqlite3/sqlite3.c:109330 #4 0x7f3e8ca095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150216 #5 0x7f3e8ca095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #6 0x7f3e8ca181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #7 0x7f3e8cb07ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #8 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #9 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #10 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #11 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #12 0x7f3e8c98a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #13 0x7f3e8c98a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #14 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #15 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #16 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #17 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #18 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #19 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #20 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #21 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #22 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #23 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #24 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #25 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #26 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #27 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #28 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #29 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #30 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #31 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #36 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #37 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #38 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #39 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #40 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #41 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #42 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #43 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #44 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #45 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #46 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #47 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #48 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #49 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #54 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #55 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #56 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #57 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #58 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #59 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #62 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #63 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #68 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #69 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #70 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #71 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #72 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #73 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #74 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #75 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #76 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #77 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #81 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #82 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #83 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #84 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #88 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #89 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #90 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #93 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #94 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #102 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #103 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #104 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #105 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #114 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #115 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #116 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #117 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #118 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #119 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #120 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #121 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #122 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #123 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #124 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #125 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #126 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #127 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #128 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #129 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #130 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #131 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #132 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #133 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #134 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #135 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #136 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #137 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #138 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #139 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #140 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #141 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #142 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #143 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #144 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #145 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #146 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #147 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #148 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #149 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #150 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #151 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #152 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #153 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #154 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #155 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #156 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #157 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #158 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #159 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:108558:20: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8c882bb7 in resolveAsName vendor/sqlite3/sqlite3.c:108558 #1 0x7f3e8c886e11 in resolveOrderGroupBy vendor/sqlite3/sqlite3.c:108872 #2 0x7f3e8c8a6408 in resolveSelectStep vendor/sqlite3/sqlite3.c:109120 #3 0x7f3e8c8760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #4 0x7f3e8ca095d3 in sqlite3ResolveSelectNames vendor/sqlite3/sqlite3.c:109330 #5 0x7f3e8ca095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150216 #6 0x7f3e8ca095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #7 0x7f3e8ca181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #8 0x7f3e8cb07ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #9 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #10 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #11 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #12 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #13 0x7f3e8c98a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #14 0x7f3e8c98a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #15 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #16 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #17 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #18 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #19 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #20 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #21 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #22 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #23 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #24 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #25 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #26 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #27 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #28 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #29 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #30 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #31 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #32 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #33 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #34 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #35 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #36 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #37 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #38 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #39 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #40 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #41 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #42 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #43 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #44 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #45 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #46 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #47 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #48 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #49 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #50 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #55 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #56 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #57 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #58 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #59 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #60 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #63 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #64 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #69 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #70 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #71 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #72 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #73 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #74 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #75 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #76 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #77 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #78 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #79 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #80 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #81 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #82 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #83 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #84 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #85 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #86 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #87 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #88 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #89 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #90 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #91 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #92 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #93 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #94 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #95 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #96 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #97 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #98 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #99 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #100 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #101 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #102 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #103 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #104 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #105 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #106 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #111 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #112 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #113 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #114 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #115 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #116 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #117 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #118 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #119 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #120 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #121 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #122 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #123 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #124 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #125 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #126 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #127 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #128 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #129 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #130 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #131 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #132 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #133 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #134 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #135 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #136 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #137 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #138 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #139 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #140 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #141 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #142 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #143 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #144 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #145 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #146 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #147 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #148 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #149 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #150 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #151 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #152 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #153 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #154 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #155 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #156 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #157 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #158 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #159 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #160 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:108559:36: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8c882bf3 in resolveAsName vendor/sqlite3/sqlite3.c:108559 #1 0x7f3e8c886e11 in resolveOrderGroupBy vendor/sqlite3/sqlite3.c:108872 #2 0x7f3e8c8a6408 in resolveSelectStep vendor/sqlite3/sqlite3.c:109120 #3 0x7f3e8c8760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #4 0x7f3e8ca095d3 in sqlite3ResolveSelectNames vendor/sqlite3/sqlite3.c:109330 #5 0x7f3e8ca095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150216 #6 0x7f3e8ca095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #7 0x7f3e8ca181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #8 0x7f3e8cb07ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #9 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #10 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #11 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #12 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #13 0x7f3e8c98a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #14 0x7f3e8c98a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #15 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #16 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #17 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #18 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #19 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #20 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #21 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #22 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #23 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #24 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #25 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #26 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #27 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #28 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #29 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #30 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #31 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #32 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #33 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #34 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #35 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #36 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #37 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #38 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #39 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #40 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #41 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #42 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #43 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #44 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #45 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #46 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #47 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #48 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #49 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #50 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #55 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #56 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #57 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #58 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #59 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #60 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #63 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #64 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #69 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #70 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #71 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #72 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #73 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #74 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #75 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #76 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #77 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #78 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #79 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #80 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #81 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #82 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #83 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #84 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #85 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #86 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #87 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #88 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #89 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #90 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #91 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #92 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #93 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #94 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #95 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #96 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #97 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #98 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #99 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #100 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #101 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #102 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #103 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #104 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #105 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #106 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #109 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #110 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #111 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #112 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #113 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #114 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #115 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #116 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #117 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #118 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #119 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #120 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #121 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #122 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #123 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #124 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #125 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #126 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #127 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #128 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #129 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #130 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #131 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #132 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #133 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #134 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #135 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #136 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #137 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #138 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #139 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #140 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #141 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #142 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #143 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #144 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #145 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #146 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #147 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #148 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #149 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #150 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #151 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #152 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #153 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #154 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #155 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #156 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #157 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #158 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #159 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #160 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:108900:55: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8c88755c in resolveOrderGroupBy vendor/sqlite3/sqlite3.c:108900 #1 0x7f3e8c8a6408 in resolveSelectStep vendor/sqlite3/sqlite3.c:109120 #2 0x7f3e8c8760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #3 0x7f3e8ca095d3 in sqlite3ResolveSelectNames vendor/sqlite3/sqlite3.c:109330 #4 0x7f3e8ca095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150216 #5 0x7f3e8ca095d3 in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #6 0x7f3e8ca181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #7 0x7f3e8cb07ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #8 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #9 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #10 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #11 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #12 0x7f3e8c98a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #13 0x7f3e8c98a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #14 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #15 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #16 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #17 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #18 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #19 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #20 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #21 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #22 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #23 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #24 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #25 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #26 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #27 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #28 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #29 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #30 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #31 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #36 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #37 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #38 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #39 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #40 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #41 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #42 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #43 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #44 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #45 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #46 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #47 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #48 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #49 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #54 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #55 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #56 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #57 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #58 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #59 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #62 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #63 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #68 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #69 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #70 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #71 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #72 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #73 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #74 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #75 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #76 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #77 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #81 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #82 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #83 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #84 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #88 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #89 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #90 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #91 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #92 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #93 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #94 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #102 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #103 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #104 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #105 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #108 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #109 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #114 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #115 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #116 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #117 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #118 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #119 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #120 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #121 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #122 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #123 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #124 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #125 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #126 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #127 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #128 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #129 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #130 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #131 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #132 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #133 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #134 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #135 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #136 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #137 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #138 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #139 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #140 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #141 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #142 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #143 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #144 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #145 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #146 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #147 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #148 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #149 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #150 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #151 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #152 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #153 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #154 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #155 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #156 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #157 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #158 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #159 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:145839:24: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8c9d9fee in sqlite3GenerateColumnNames vendor/sqlite3/sqlite3.c:145839 #1 0x7f3e8ca194f6 in sqlite3Select vendor/sqlite3/sqlite3.c:151190 #2 0x7f3e8cb07ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f3e8c98a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f3e8c98a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #9 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #10 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #11 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #12 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #13 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #14 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #15 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #16 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #17 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #18 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #19 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #20 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #21 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #22 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #23 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #24 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #25 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #26 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #31 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #32 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #33 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #34 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #35 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #36 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #37 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #42 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #43 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #44 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #45 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #46 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #51 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #52 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #53 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #54 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #57 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #58 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #70 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #71 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #72 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #73 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #74 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #75 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #76 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #77 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #78 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #79 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #83 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #84 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #85 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #88 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #89 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #93 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #94 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #95 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #96 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #97 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #98 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #99 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #100 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #105 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #106 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #109 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #110 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #111 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #112 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #113 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #114 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #115 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #116 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #117 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #118 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #119 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #120 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #121 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #122 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #123 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #124 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #125 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #126 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #127 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #128 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #129 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #130 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #131 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #132 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #133 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #134 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #135 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #136 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #137 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #138 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #139 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #140 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #141 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #142 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #143 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #144 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #145 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #146 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #147 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #148 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #149 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #150 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #151 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #152 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #153 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #154 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:145845:18: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8c9d9e7f in sqlite3GenerateColumnNames vendor/sqlite3/sqlite3.c:145845 #1 0x7f3e8ca194f6 in sqlite3Select vendor/sqlite3/sqlite3.c:151190 #2 0x7f3e8cb07ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f3e8c98a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f3e8c98a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #9 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #10 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #11 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #12 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #13 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #14 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #15 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #16 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #17 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #18 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #19 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #20 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #21 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #22 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #23 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #24 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #25 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #26 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #31 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #32 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #33 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #34 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #35 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #36 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #37 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #42 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #43 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #44 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #45 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #46 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #51 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #52 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #53 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #54 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #57 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #58 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #70 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #71 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #72 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #73 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #74 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #75 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #76 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #77 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #78 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #79 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #83 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #84 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #85 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #88 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #89 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #93 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #94 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #95 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #96 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #97 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #98 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #99 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #100 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #105 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #106 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #109 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #110 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #111 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #112 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #113 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #114 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #115 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #116 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #117 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #118 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #119 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #120 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #121 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #122 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #123 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #124 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #125 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #126 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #127 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #128 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #129 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #130 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #131 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #132 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #133 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #134 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #135 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #136 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #137 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #138 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #139 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #140 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #141 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #142 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #143 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #144 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #145 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #146 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #147 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #148 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #149 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #150 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #151 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #152 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #153 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #154 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:145845:41: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8c9da06a in sqlite3GenerateColumnNames vendor/sqlite3/sqlite3.c:145845 #1 0x7f3e8ca194f6 in sqlite3Select vendor/sqlite3/sqlite3.c:151190 #2 0x7f3e8cb07ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f3e8c98a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f3e8c98a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #9 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #10 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #11 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #12 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #13 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #14 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #15 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #16 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #17 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #18 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #19 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #20 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #21 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #22 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #23 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #24 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #25 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #26 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #31 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #32 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #33 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #34 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #35 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #36 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #37 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #42 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #43 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #44 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #45 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #46 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #51 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #52 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #53 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #54 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #57 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #58 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #70 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #71 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #72 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #73 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #74 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #75 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #76 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #77 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #78 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #79 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #83 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #84 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #85 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #88 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #89 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #93 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #94 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #95 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #96 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #97 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #98 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #99 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #100 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #105 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #106 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #109 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #110 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #111 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #112 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #113 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #114 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #115 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #116 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #117 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #118 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #119 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #120 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #121 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #122 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #123 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #124 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #125 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #126 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #127 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #128 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #129 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #130 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #131 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #132 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #133 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #134 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #135 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #136 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #137 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #138 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #139 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #140 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #141 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #142 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #143 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #144 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #145 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #146 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #147 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #148 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #149 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #150 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #151 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #152 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #153 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #154 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:145847:30: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8c9da718 in sqlite3GenerateColumnNames vendor/sqlite3/sqlite3.c:145847 #1 0x7f3e8ca194f6 in sqlite3Select vendor/sqlite3/sqlite3.c:151190 #2 0x7f3e8cb07ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #3 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f3e8c98a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f3e8c98a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #9 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #10 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #11 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #12 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #13 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #14 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #15 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #16 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #17 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #18 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #19 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #20 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #21 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #22 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #23 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #24 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #25 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #26 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #31 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #32 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #33 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #34 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #35 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #36 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #37 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #42 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #43 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #44 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #45 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #46 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #51 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #52 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #53 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #54 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #57 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #58 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #70 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #71 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #72 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #73 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #74 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #75 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #76 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #77 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #78 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #79 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #83 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #84 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #85 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #88 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #89 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #93 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #94 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #95 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #96 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #97 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #98 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #99 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #100 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #105 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #106 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #109 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #110 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #111 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #112 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #113 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #114 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #115 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #116 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #117 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #118 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #119 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #120 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #121 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #122 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #123 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #124 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #125 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #126 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #127 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #128 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #129 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #130 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #131 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #132 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #133 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #134 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #135 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #136 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #137 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #138 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #139 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #140 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #141 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #142 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #143 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #144 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #145 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #146 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #147 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #148 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #149 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #150 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #151 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #152 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #153 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #154 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:145759:24: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8c9d9f95 in generateColumnTypes vendor/sqlite3/sqlite3.c:145759 #1 0x7f3e8c9d9f95 in sqlite3GenerateColumnNames vendor/sqlite3/sqlite3.c:145874 #2 0x7f3e8ca194f6 in sqlite3Select vendor/sqlite3/sqlite3.c:151190 #3 0x7f3e8cb07ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f3e8c98a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f3e8c98a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #10 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #11 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #12 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #13 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #14 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #15 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #16 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #17 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #18 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #19 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #20 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #21 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #22 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #23 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #24 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #25 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #26 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #27 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #28 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #29 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #30 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #31 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #32 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #33 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #34 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #35 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #36 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #37 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #38 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #43 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #44 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #45 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #46 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #47 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #52 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #53 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #54 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #55 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #56 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #57 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #58 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #59 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #64 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #65 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #66 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #70 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #71 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #72 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #73 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #74 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #75 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #76 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #77 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #78 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #79 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #80 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #81 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #82 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #83 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #84 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #85 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #86 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #98 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #99 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #100 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #101 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #106 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #107 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #108 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #109 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #110 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #111 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #112 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #113 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #114 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #115 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #116 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #117 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #118 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #119 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #120 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #121 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #122 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #123 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #124 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #125 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #126 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #127 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #128 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #129 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #130 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #131 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #132 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #133 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #134 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #135 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #136 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #137 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #138 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #139 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #140 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #141 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #142 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #143 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #144 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #145 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #146 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #147 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #148 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #149 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #150 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #151 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #152 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #153 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #154 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #155 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:145214:35: runtime error: index 7 out of bounds for type 'CollSeq *[1]' #0 0x7f3e8c9d0ef8 in sqlite3KeyInfoAlloc vendor/sqlite3/sqlite3.c:145214 #1 0x7f3e8c9d1e09 in sqlite3KeyInfoFromExprList vendor/sqlite3/sqlite3.c:145287 #2 0x7f3e8ca1a7c1 in sqlite3Select vendor/sqlite3/sqlite3.c:151707 #3 0x7f3e8cb07ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #4 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #8 0x7f3e8c98a9e8 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #9 0x7f3e8c98a9e8 in sqlite3_exec vendor/sqlite3/sqlite3.c:137112 #10 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #11 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #12 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #13 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #14 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #15 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #16 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #17 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #18 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #19 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #20 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #21 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #22 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #23 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #24 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #25 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #26 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #27 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #28 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #29 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #30 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #31 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #32 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #33 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #34 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #35 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #36 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #37 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #38 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #39 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #40 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #41 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #42 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #43 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #44 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #45 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #46 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #47 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #48 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #49 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #50 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #51 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #52 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #53 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #54 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #55 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #56 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #57 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #58 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #59 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #60 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #61 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #62 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #63 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #64 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #65 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #66 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #67 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #68 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #69 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #70 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #71 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #72 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #73 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #74 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #75 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #76 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #77 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #78 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #79 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #80 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #81 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #82 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #83 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #84 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #85 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #86 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #87 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #88 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #89 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #90 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #91 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #92 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #93 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #94 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #95 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #96 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #97 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #98 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #99 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #100 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #101 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #104 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #105 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #106 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #107 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #108 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #109 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #110 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #111 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #112 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #113 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #114 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #115 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #116 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #117 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #118 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #119 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #120 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #121 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #122 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #123 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #124 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #125 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #126 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #127 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #128 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #129 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #130 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #131 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #132 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #133 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #134 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #135 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #136 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #137 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #138 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #139 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #140 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #141 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #142 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #143 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #144 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #145 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #146 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #147 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #148 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #149 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #150 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #151 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #152 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #153 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #154 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #155 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:93710:29: runtime error: index 5 out of bounds for type 'u32 [1]' #0 0x7f3e8c7fb70d in allocateCursor vendor/sqlite3/sqlite3.c:93710 #1 0x7f3e8c81231a in sqlite3VdbeExec vendor/sqlite3/sqlite3.c:97773 #2 0x7f3e8c850e4d in sqlite3Step vendor/sqlite3/sqlite3.c:91376 #3 0x7f3e8c850e4d in sqlite3_step vendor/sqlite3/sqlite3.c:91437 #4 0x7f3e8c98aa34 in sqlite3_exec vendor/sqlite3/sqlite3.c:137126 #5 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #6 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #7 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #8 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #9 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #10 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #11 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #12 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #13 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #14 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #15 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #16 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #17 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #18 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #19 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #20 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #21 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #22 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #27 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #28 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #29 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #30 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #31 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #32 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #33 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #34 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #35 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #36 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #37 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #38 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #39 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #40 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #41 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #42 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #43 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #44 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #45 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #46 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #47 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #48 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #49 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #50 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #51 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #52 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #53 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #54 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #55 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #56 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #57 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #58 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #59 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #60 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #61 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #62 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #63 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #64 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #65 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #66 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #67 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #68 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #69 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #70 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #71 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #72 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #73 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #74 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #75 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #79 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #80 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #81 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #82 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #83 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #84 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #85 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #86 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #87 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #88 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #89 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #90 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #91 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #92 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #93 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #94 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #95 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #96 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #101 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #102 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #103 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #104 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #105 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #106 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #107 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #108 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #109 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #110 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #111 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #112 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #113 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #114 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #115 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #116 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #117 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #118 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #119 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #120 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #121 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #122 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #123 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #124 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #125 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #126 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #127 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #128 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #129 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #130 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #131 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #132 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #133 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #134 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #135 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #136 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #137 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #138 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #139 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #140 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #141 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #142 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #143 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #144 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #145 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #146 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #147 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #148 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #149 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #150 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:96477:23: runtime error: index 1 out of bounds for type 'u32 [1]' #0 0x7f3e8c848405 in sqlite3VdbeExec vendor/sqlite3/sqlite3.c:96477 #1 0x7f3e8c850e4d in sqlite3Step vendor/sqlite3/sqlite3.c:91376 #2 0x7f3e8c850e4d in sqlite3_step vendor/sqlite3/sqlite3.c:91437 #3 0x7f3e8c98aa34 in sqlite3_exec vendor/sqlite3/sqlite3.c:137126 #4 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #5 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #6 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #7 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #8 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #9 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #10 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #11 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #12 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #13 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #14 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #15 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #16 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #17 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #18 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #19 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #20 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #21 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #22 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #23 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #24 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #25 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #26 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #27 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #28 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #29 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #30 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #31 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #32 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #33 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #34 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #35 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #36 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #37 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #38 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #39 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #40 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #41 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #42 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #43 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #44 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #45 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #46 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #49 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #50 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #51 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #52 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #53 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #54 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #55 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #56 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #57 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #58 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #59 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #60 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #61 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #62 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #63 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #64 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #65 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #66 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #67 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #68 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #69 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #70 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #71 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #72 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #73 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #74 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #75 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #76 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #77 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #78 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #79 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #80 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #81 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #82 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #83 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #84 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #88 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #89 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #90 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #91 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #92 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #93 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #94 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #95 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #96 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #97 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #98 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #99 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #104 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #105 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #106 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #107 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #108 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #109 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #110 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #111 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #112 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #113 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #114 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #115 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #116 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #117 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #118 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #119 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #120 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #121 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #122 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #123 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #124 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #125 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #126 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #127 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #128 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #129 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #130 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #131 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #132 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #133 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #134 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #135 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #136 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #137 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #138 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #139 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #140 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #141 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #142 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #143 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #144 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #145 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #146 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #147 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #148 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #149 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:96482:20: runtime error: index 4 out of bounds for type 'u32 [1]' #0 0x7f3e8c83fb07 in sqlite3VdbeExec vendor/sqlite3/sqlite3.c:96482 #1 0x7f3e8c850e4d in sqlite3Step vendor/sqlite3/sqlite3.c:91376 #2 0x7f3e8c850e4d in sqlite3_step vendor/sqlite3/sqlite3.c:91437 #3 0x7f3e8c98aa34 in sqlite3_exec vendor/sqlite3/sqlite3.c:137126 #4 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #5 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #6 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #7 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #8 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #9 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #10 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #11 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #12 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #13 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #14 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #15 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #16 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #17 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #18 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #19 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #20 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #21 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #22 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #23 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #24 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #25 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #26 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #27 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #28 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #29 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #30 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #31 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #32 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #33 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #34 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #35 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #36 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #37 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #38 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #39 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #40 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #41 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #42 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #43 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #44 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #45 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #46 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #47 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #48 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #49 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #50 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #51 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #52 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #53 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #54 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #55 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #56 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #57 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #58 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #59 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #60 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #61 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #62 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #63 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #64 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #65 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #66 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #67 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #68 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #69 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #70 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #71 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #72 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #73 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #74 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #75 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #76 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #77 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #78 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #79 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #80 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #81 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #82 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #83 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #84 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #88 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #89 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #90 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #91 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #92 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #93 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #94 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #95 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #96 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #97 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #98 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #99 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #100 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #101 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #102 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #103 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #104 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #105 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #106 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #107 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #108 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #109 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #110 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #111 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #112 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #113 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #114 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #115 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #116 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #117 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #118 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #119 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #120 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #121 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #122 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #123 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #124 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #125 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #126 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #127 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #128 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #129 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #130 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #131 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #132 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #133 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #134 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #135 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #136 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #137 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #138 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #139 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #140 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #141 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #142 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #143 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #144 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #145 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #146 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #147 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #148 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #149 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:123806:53: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8c93c3e0 in sqlite3AddPrimaryKey vendor/sqlite3/sqlite3.c:123806 #1 0x7f3e8cb0fee0 in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177708 #2 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #3 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #4 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #5 0x7f3e8c9acd7b in sqlite3InitCallback vendor/sqlite3/sqlite3.c:142738 #6 0x7f3e8c98b263 in sqlite3_exec vendor/sqlite3/sqlite3.c:137157 #7 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #8 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #9 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #10 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #11 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #12 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #13 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #14 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #15 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #16 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #17 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #18 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #19 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #20 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #21 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #22 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #23 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #24 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #25 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #26 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #27 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #28 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #29 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #30 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #31 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #32 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #33 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #34 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #35 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #36 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #37 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #38 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #39 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #40 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #41 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #42 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #43 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #44 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #45 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #46 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #47 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #48 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #49 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #50 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #51 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #52 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #55 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #56 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #57 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #58 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #59 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #60 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #61 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #62 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #63 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #64 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #65 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #66 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #67 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #68 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #69 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #70 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #71 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #72 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #73 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #74 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #75 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #76 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #77 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #81 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #82 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #83 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #84 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #85 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #86 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #87 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #88 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #89 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #90 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #91 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #92 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #93 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #94 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #95 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #96 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #97 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #98 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #99 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #100 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #101 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #102 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #103 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #104 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #105 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #106 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #107 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #108 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #109 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #110 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #111 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #112 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #113 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #114 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #115 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #116 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #117 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #118 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #119 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #120 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #121 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #122 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #123 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #124 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #125 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #126 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #127 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #128 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #129 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #130 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #131 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #132 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #133 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #134 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #135 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #136 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #137 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #138 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #139 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #140 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #141 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #142 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #143 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #144 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #145 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #146 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #147 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #148 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #149 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #150 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #151 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #152 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:125850:19: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8c932b1a in sqlite3HasExplicitNulls vendor/sqlite3/sqlite3.c:125850 #1 0x7f3e8c933483 in sqlite3CreateIndex vendor/sqlite3/sqlite3.c:125915 #2 0x7f3e8c93bab8 in sqlite3AddPrimaryKey vendor/sqlite3/sqlite3.c:123844 #3 0x7f3e8cb0fee0 in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177708 #4 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #5 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #6 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #7 0x7f3e8c9acd7b in sqlite3InitCallback vendor/sqlite3/sqlite3.c:142738 #8 0x7f3e8c98b263 in sqlite3_exec vendor/sqlite3/sqlite3.c:137157 #9 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #10 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #11 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #12 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #13 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #14 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #15 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #16 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #17 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #18 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #19 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #20 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #21 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #22 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #23 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #24 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #25 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #26 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #31 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #32 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #33 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #34 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #35 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #36 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #37 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #42 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #43 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #44 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #45 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #46 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #51 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #52 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #53 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #54 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #57 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #58 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #70 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #71 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #72 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #73 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #74 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #75 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #76 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #77 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #78 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #79 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #83 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #84 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #85 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #86 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #87 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #88 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #89 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #90 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #91 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #92 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #93 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #94 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #95 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #96 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #97 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #98 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #99 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #100 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #101 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #102 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #103 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #104 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #105 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #106 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #107 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #108 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #109 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #110 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #111 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #112 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #113 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #114 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #115 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #116 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #117 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #118 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #119 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #120 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #121 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #122 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #123 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #124 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #125 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #126 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #127 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #128 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #129 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #130 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #131 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #132 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #133 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #134 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #135 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #136 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #137 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #138 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #139 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #140 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #141 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #142 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #143 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #144 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #145 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #146 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #147 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #148 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #149 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #150 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #151 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #152 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #153 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #154 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:126089:27: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8c93aeea in sqlite3CreateIndex vendor/sqlite3/sqlite3.c:126089 #1 0x7f3e8c93bab8 in sqlite3AddPrimaryKey vendor/sqlite3/sqlite3.c:123844 #2 0x7f3e8cb0fee0 in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177708 #3 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f3e8c9acd7b in sqlite3InitCallback vendor/sqlite3/sqlite3.c:142738 #7 0x7f3e8c98b263 in sqlite3_exec vendor/sqlite3/sqlite3.c:137157 #8 0x7f3e8c9aec71 in sqlite3InitOne vendor/sqlite3/sqlite3.c:142974 #9 0x7f3e8c9b1776 in sqlite3Init vendor/sqlite3/sqlite3.c:143049 #10 0x7f3e8c9b1ad2 in sqlite3ReadSchema vendor/sqlite3/sqlite3.c:143075 #11 0x7f3e8c9b9c20 in sqlite3Pragma vendor/sqlite3/sqlite3.c:140021 #12 0x7f3e8cb0e4ce in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:178571 #13 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #14 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #15 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #16 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #17 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #18 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #19 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #20 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #21 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #22 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #23 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #24 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #25 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #26 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #27 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #28 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #29 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #30 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #31 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #32 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #33 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #34 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #35 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #36 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #41 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #42 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #43 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #44 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #45 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #46 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #47 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #48 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #49 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #50 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #51 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #52 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #53 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #54 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #55 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #56 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #57 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #62 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #63 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #64 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #65 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #66 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #67 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #68 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #69 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #70 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #71 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #72 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #73 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #74 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #75 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #76 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #77 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #78 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #79 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #80 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #81 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #82 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #83 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #84 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #85 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #86 0x8b4f71 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:956 #87 0x8b4f71 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5835 #88 0x8e909c in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7848 #89 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #90 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #91 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #92 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #93 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #94 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #95 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #96 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #97 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #98 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #99 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #100 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #101 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #102 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #103 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #104 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #105 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #106 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #107 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #108 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #109 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #110 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #111 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #112 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #113 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #114 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #115 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #116 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #117 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #118 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #119 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #120 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #121 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #122 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #123 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #124 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #125 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #126 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #127 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #128 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #129 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #130 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #131 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #132 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #133 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #134 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #135 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #136 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #137 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #138 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #139 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #140 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #141 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #142 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #143 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #144 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #145 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #146 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #147 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #148 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #149 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #150 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #151 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #152 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #153 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:149853:19: runtime error: index 1 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8ca05b5f in selectExpander vendor/sqlite3/sqlite3.c:149853 #1 0x7f3e8c8760a2 in sqlite3WalkSelect vendor/sqlite3/sqlite3.c:107013 #2 0x7f3e8ca0946f in sqlite3SelectExpand vendor/sqlite3/sqlite3.c:150132 #3 0x7f3e8ca0946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150214 #4 0x7f3e8ca0946f in sqlite3SelectPrep vendor/sqlite3/sqlite3.c:150205 #5 0x7f3e8ca181de in sqlite3Select vendor/sqlite3/sqlite3.c:151150 #6 0x7f3e8cb07ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #7 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #8 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #9 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #10 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #11 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #12 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #13 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #14 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #15 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #16 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #17 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #18 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #19 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #20 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #21 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #25 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #26 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #27 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #28 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #29 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #30 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #31 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #32 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #33 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #34 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #35 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #36 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #37 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #38 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #39 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #40 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #41 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #42 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #43 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #44 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #45 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #46 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #47 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #48 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #49 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #50 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #51 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #52 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #53 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #54 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #55 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #56 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #57 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #58 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #59 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #60 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #61 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #62 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #63 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #64 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #65 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #66 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #67 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #68 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #69 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #70 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #71 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #72 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #73 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #74 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #75 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #76 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #77 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #78 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #79 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #80 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #81 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #82 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #83 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #84 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #85 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #86 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #87 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #88 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #89 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #90 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #91 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #92 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #93 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #94 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #95 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #96 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #97 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #98 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #99 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #100 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #101 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #102 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #103 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #104 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #105 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #106 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #107 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #108 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #109 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #110 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:127610:18: runtime error: index 1 out of bounds for type 'CollSeq *[1]' #0 0x7f3e8c961b1e in sqlite3KeyInfoOfIndex vendor/sqlite3/sqlite3.c:127610 #1 0x7f3e8cadc2c9 in sqlite3VdbeSetP4KeyInfo vendor/sqlite3/sqlite3.c:86609 #2 0x7f3e8cadc2c9 in sqlite3WhereBegin vendor/sqlite3/sqlite3.c:170189 #3 0x7f3e8ca22aaa in sqlite3Select vendor/sqlite3/sqlite3.c:152371 #4 0x7f3e8cb07ecc in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177755 #5 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #6 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #7 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #8 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #9 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #10 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #11 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #12 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #13 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #14 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #15 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #16 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #17 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #18 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #19 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #23 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #24 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #25 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #26 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #27 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #28 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #29 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #30 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #31 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #32 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #33 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #34 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #35 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #36 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #37 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #38 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #39 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #40 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #41 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #42 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #43 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #44 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #45 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #46 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #51 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #52 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #53 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #54 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #55 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #56 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #57 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #58 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #59 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #60 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #61 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #62 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #63 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #64 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #65 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #66 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #67 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #68 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #69 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #70 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #71 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #72 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #73 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #74 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #75 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #76 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #77 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #81 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #82 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #83 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #84 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #85 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #86 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #87 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #88 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #89 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #90 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #91 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #92 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #93 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #94 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #95 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #96 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #97 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #98 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #99 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #100 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #101 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #102 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #103 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #104 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #105 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #106 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #107 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #108 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:96527:18: runtime error: index 1 out of bounds for type 'u32 [1]' #0 0x7f3e8c84c7a9 in sqlite3VdbeExec vendor/sqlite3/sqlite3.c:96527 #1 0x7f3e8c850e4d in sqlite3Step vendor/sqlite3/sqlite3.c:91376 #2 0x7f3e8c850e4d in sqlite3_step vendor/sqlite3/sqlite3.c:91437 #3 0x7f3e8c653af9 in SqliteResultImpl::step_run() /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:341 #4 0x7f3e8c66536d in SqliteResultImpl::step() /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:334 #5 0x7f3e8c66536d in SqliteResultImpl::after_bind(bool) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:306 #6 0x7f3e8c66536d in SqliteResultImpl::after_bind(bool) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:303 #7 0x7f3e8c66536d in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:31 #8 0x7f3e8c66536d in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #9 0x7f3e8c66536d in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #10 0x7f3e8c66536d in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #11 0x7f3e8c66536d in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #12 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #13 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #14 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #15 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #16 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #17 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #21 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #22 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #23 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #24 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #25 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #26 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #27 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #28 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #29 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #30 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #31 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #32 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #33 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #34 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #35 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #36 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #37 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #38 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #39 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #40 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #41 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #42 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #43 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #46 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #47 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #48 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #49 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #50 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #51 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #52 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #53 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #54 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #55 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #56 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #57 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #58 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #59 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #60 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #61 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #62 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #63 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #64 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #65 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #66 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #67 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #68 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #69 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #70 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #71 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #72 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #73 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #74 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #75 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #76 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #77 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #78 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #79 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #80 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #81 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #82 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #83 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #84 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #85 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #86 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #87 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #88 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #89 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #90 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #91 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #92 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #93 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #94 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #95 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #96 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #97 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #98 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:111616:44: runtime error: index 2 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8cb17538 in sqlite3ExprListSetSpan vendor/sqlite3/sqlite3.c:111616 #1 0x7f3e8cb17538 in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177853 #2 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #3 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #4 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #5 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #6 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #7 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #8 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #9 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #10 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #11 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #12 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #13 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #14 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #15 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #16 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #17 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #18 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #19 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #20 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #21 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #22 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #23 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #24 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #25 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #26 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #27 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #28 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #29 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #30 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #31 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #32 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #33 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #34 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #35 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #36 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #37 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #38 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #39 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #40 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #41 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #42 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #43 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #44 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #45 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #46 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #47 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #48 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #49 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #50 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #51 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #52 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #53 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #54 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #55 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #56 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #57 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #58 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #59 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #60 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #61 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #62 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #63 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #64 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #65 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #66 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #67 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #68 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #69 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #70 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #71 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #72 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #73 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #74 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #75 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #76 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #77 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #78 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #79 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #80 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #81 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #82 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #83 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #84 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #85 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #86 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #87 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #88 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #89 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #90 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #91 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #92 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #93 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #94 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #95 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #96 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #97 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #98 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #99 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) vendor/sqlite3/sqlite3.c:111583:22: runtime error: index 4 out of bounds for type 'ExprList_item [1]' #0 0x7f3e8cd5dd56 in sqlite3ExprListSetName.part.0.lto_priv.0 vendor/sqlite3/sqlite3.c:111583 #1 0x7f3e8cb1300e in sqlite3ExprListSetName vendor/sqlite3/sqlite3.c:177852 #2 0x7f3e8cb1300e in yy_reduce.isra.0 vendor/sqlite3/sqlite3.c:177852 #3 0x7f3e8cb40521 in sqlite3Parser vendor/sqlite3/sqlite3.c:179205 #4 0x7f3e8cb40521 in sqlite3RunParser vendor/sqlite3/sqlite3.c:180539 #5 0x7f3e8c9aa9e9 in sqlite3Prepare vendor/sqlite3/sqlite3.c:143386 #6 0x7f3e8c9b256f in sqlite3LockAndPrepare vendor/sqlite3/sqlite3.c:143461 #7 0x7f3e8c661595 in sqlite3_prepare_v2 vendor/sqlite3/sqlite3.c:143548 #8 0x7f3e8c661595 in SqliteResultImpl::prepare(sqlite3*, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:85 #9 0x7f3e8c661595 in SqliteResultImpl::SqliteResultImpl(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResultImpl.cpp:15 #10 0x7f3e8c661595 in SqliteResult::SqliteResult(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:12 #11 0x7f3e8c661595 in SqliteResult::create_and_send_query(boost::shared_ptr const&, std::__cxx11::basic_string, std::allocator > const&) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/SqliteResult.cpp:17 #12 0x7f3e8c661595 in result_create(cpp11::external_pointer, &(void cpp11::default_deleter >(boost::shared_ptr*))>, std::__cxx11::basic_string, std::allocator >) /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/result.cpp:10 #13 0x7f3e8c661595 in _RSQLite_result_create /tmp/RtmpPuoXuy/R.INSTALL2037453b86db88/RSQLite/src/cpp11.cpp:72 #14 0x75b256 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:757 #15 0x8efc2a in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8668 #16 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #17 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #18 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #19 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #20 0x92db01 in forcePromise.part.0.lto_priv.0 /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:976 #21 0x8682e7 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1193 #22 0x8fdac7 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8012 #23 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #24 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #25 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #26 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #27 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #28 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #29 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #30 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #31 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #32 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #33 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #34 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #35 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #36 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #37 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #38 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #39 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #40 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #41 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #42 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #43 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #44 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #45 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #46 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #47 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #48 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #49 0x8edd25 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #50 0x8edd25 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8089 #51 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #52 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #53 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #54 0x886dfd in R_execMethod /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2562 #55 0x7f3e9e9bac7a in R_dispatchGeneric /data/gannet/ripley/R/svn/R-devel/src/library/methods/src/methods_list_dispatch.c:1154 #56 0xab4c46 in do_standardGeneric /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:1348 #57 0x8f2831 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8053 #58 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #59 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #60 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #61 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #62 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #63 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #64 0x8976ee in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3567 #65 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #66 0x87cf2b in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2996 #67 0x867876 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1232 #68 0x89d201 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3941 #69 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #70 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #71 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #72 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #73 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #74 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #75 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #76 0x89e2f3 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3959 #77 0x8d9222 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8118 #78 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #79 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #80 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #81 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #82 0x8842f7 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #83 0x8842f7 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2460 #84 0x4b2d66 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:75 #85 0xa9d566 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1411 #86 0x8e6431 in bcEval_loop /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:8138 #87 0x8c646b in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7501 #88 0x866db2 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1167 #89 0x87e7ca in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2393 #90 0x8829da in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2306 #91 0x867453 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2328 #92 0x867453 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1280 #93 0xa0bc63 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:265 #94 0xa0bc63 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:317 #95 0xa10f7a in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1234 #96 0xa1b192 in Rf_mainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1241 #97 0x42bd5f in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29 #98 0x7f3ea1a38087 in __libc_start_call_main (/lib64/libc.so.6+0x2a087) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #99 0x7f3ea1a3814a in __libc_start_main_impl (/lib64/libc.so.6+0x2a14a) (BuildId: c8c3fa52aaee3f5d73b6fd862e39e9d4c010b6ba) #100 0x42c6e4 in _start (/data/gannet/ripley/R/gcc-SAN3/bin/exec/R+0x42c6e4) (BuildId: 73a0e2b99fab0f6bc0f73a92ce6b5e0f9cf672c9) [ FAIL 0 | WARN 0 | SKIP 0 | PASS 13 ] > > proc.time() user system elapsed 12.288 0.689 37.326