--- re-building ‘mums2.Rmd’ using rmarkdown
CustomProgressBar/CliProgressBar.h:88:37: runtime error: -nan is outside the range of representable values of type 'int'
    #0 0x7f2690a1e64e in CliProgressBar::_time_to_string[abi:cxx11](double) /data/gannet/ripley/R/packages/tests-clang-UBSAN/mums2/src/./CustomProgressBar/CliProgressBar.h:88:37
    #1 0x7f2690a1d92e in CliProgressBar::_display_ticks(double) const /data/gannet/ripley/R/packages/tests-clang-UBSAN/mums2/src/./CustomProgressBar/CliProgressBar.h:74:35
    #2 0x7f2690a1afcd in CliProgressBar::update(float) /data/gannet/ripley/R/packages/tests-clang-UBSAN/mums2/src/./CustomProgressBar/CliProgressBar.h:21:13
    #3 0x7f2690a1afcd in AnnotationController::AnnotateFeature(std::vector<Feature, std::allocator<Feature>> const&, ScoringFactory const&, double, double, double, unsigned long, int) const /data/gannet/ripley/R/packages/tests-clang-UBSAN/mums2/src/AnnotationController.cpp:64:21
    #4 0x7f2690a7d3f4 in AnnotateMs2Features(Rcpp::DataFrame_Impl<Rcpp::PreserveStorage> const&, Rcpp::Vector<19, Rcpp::PreserveStorage>, SEXPREC*, Rcpp::Vector<19, Rcpp::PreserveStorage> const&, Rcpp::Vector<16, Rcpp::PreserveStorage> const&, double, double, double, unsigned long, int) /data/gannet/ripley/R/packages/tests-clang-UBSAN/mums2/src/annotateMs2Features.cpp:37:58
    #5 0x7f2690a61fde in _mums2_AnnotateMs2Features /data/gannet/ripley/R/packages/tests-clang-UBSAN/mums2/src/RcppExports.cpp:30:34
    #6 0x56414325598b in R_doDotCall (/data/gannet/ripley/R/R-clang/bin/exec/R+0x9098b)
    #7 0x56414329fdb7 in bcEval_loop eval.c
    #8 0x56414328e13b in bcEval eval.c
    #9 0x56414328d8f4 in Rf_eval (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc88f4)
    #10 0x5641432a5a58 in R_execClosure eval.c
    #11 0x5641432a4f4a in applyClosure_core eval.c
    #12 0x56414328e816 in Rf_applyClosure (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc9816)
    #13 0x56414328dd47 in Rf_eval (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc8d47)
    #14 0x5641432aadb7 in do_set (/data/gannet/ripley/R/R-clang/bin/exec/R+0xe5db7)
    #15 0x56414328db1f in Rf_eval (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc8b1f)
    #16 0x5641432ac227 in do_eval (/data/gannet/ripley/R/R-clang/bin/exec/R+0xe7227)
    #17 0x564143294b73 in bcEval_loop eval.c
    #18 0x56414328e13b in bcEval eval.c
    #19 0x56414328d8f4 in Rf_eval (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc88f4)
    #20 0x56414328e393 in forcePromise eval.c
    #21 0x56414328d9bd in Rf_eval (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc89bd)
    #22 0x5641432ac706 in do_withVisible (/data/gannet/ripley/R/R-clang/bin/exec/R+0xe7706)
    #23 0x5641432effc7 in do_internal (/data/gannet/ripley/R/R-clang/bin/exec/R+0x12afc7)
    #24 0x564143294dd5 in bcEval_loop eval.c
    #25 0x56414328e13b in bcEval eval.c
    #26 0x56414328d8f4 in Rf_eval (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc88f4)
    #27 0x56414328e393 in forcePromise eval.c
    #28 0x56414328d9bd in Rf_eval (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc89bd)
    #29 0x56414328e393 in forcePromise eval.c
    #30 0x5641432a1ebf in getvar eval.c
    #31 0x564143292578 in bcEval_loop eval.c
    #32 0x56414328e13b in bcEval eval.c
    #33 0x56414328d8f4 in Rf_eval (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc88f4)
    #34 0x5641432a5a58 in R_execClosure eval.c
    #35 0x5641432a4f4a in applyClosure_core eval.c
    #36 0x56414328e816 in Rf_applyClosure (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc9816)
    #37 0x56414328dd47 in Rf_eval (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc8d47)
    #38 0x5641432ac227 in do_eval (/data/gannet/ripley/R/R-clang/bin/exec/R+0xe7227)
    #39 0x564143294b73 in bcEval_loop eval.c
    #40 0x56414328e13b in bcEval eval.c
    #41 0x56414328d8f4 in Rf_eval (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc88f4)
    #42 0x5641432a5a58 in R_execClosure eval.c
    #43 0x5641432a4f4a in applyClosure_core eval.c
    #44 0x56414328e816 in Rf_applyClosure (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc9816)
    #45 0x56414328dd47 in Rf_eval (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc8d47)
    #46 0x5641432a5a58 in R_execClosure eval.c
    #47 0x5641432a4f4a in applyClosure_core eval.c
    #48 0x564143294405 in bcEval_loop eval.c
    #49 0x56414328e13b in bcEval eval.c
    #50 0x56414328d8f4 in Rf_eval (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc88f4)
    #51 0x5641432a5a58 in R_execClosure eval.c
    #52 0x5641432a4f4a in applyClosure_core eval.c
    #53 0x56414328e816 in Rf_applyClosure (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc9816)
    #54 0x56414328dd47 in Rf_eval (/data/gannet/ripley/R/R-clang/bin/exec/R+0xc8d47)
    #55 0x5641432daf37 in Rf_ReplIteration (/data/gannet/ripley/R/R-clang/bin/exec/R+0x115f37)
    #56 0x5641432dca3e in run_Rmainloop (/data/gannet/ripley/R/R-clang/bin/exec/R+0x117a3e)
    #57 0x5641432dcaaa in Rf_mainloop (/data/gannet/ripley/R/R-clang/bin/exec/R+0x117aaa)
    #58 0x5641431c6db7 in main (/data/gannet/ripley/R/R-clang/bin/exec/R+0x1db7)
    #59 0x7f26a3f11574 in __libc_start_call_main (/lib64/libc.so.6+0x3574) (BuildId: 92b5376d35bb29c098175948cf3e7cbcae3aeae1)
    #60 0x7f26a3f11627 in __libc_start_main@GLIBC_2.2.5 (/lib64/libc.so.6+0x3627) (BuildId: 92b5376d35bb29c098175948cf3e7cbcae3aeae1)
    #61 0x5641431c6cd4 in _start (/data/gannet/ripley/R/R-clang/bin/exec/R+0x1cd4)

SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior CustomProgressBar/CliProgressBar.h:88:37 
--- finished re-building ‘mums2.Rmd’