--- re-building ‘adlaplace.Rmd’ using rmarkdown /usr/local/clang23/bin/../include/c++/v1/__utility/swap.h:43:11: runtime error: load of value 141, which is not a valid value for type '__libcpp_remove_reference_t' (aka 'bool') #0 0x7f182c66140d in CppAD::ADFun::swap(CppAD::ADFun&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x6140d) #1 0x7f182c6f656a in CppAD::ADFun::ADFun(CppAD::ADFun&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf656a) #2 0x7f182c6f5611 in AdTape::AdTape(AdTape&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf5611) #3 0x7f182c6f9828 in adlaplace_make_ad_shard(AdTape&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf9828) #4 0x7f182c79038f in packs_to_ad_fun(std::__1::vector>&&, unsigned long, unsigned long, ad_shard* (*)(AdTape&&)) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x19038f) #5 0x7f182c791c93 in get_ad_pack_raw_obs_h(SEXPREC*, Rcpp::Vector<19, Rcpp::PreserveStorage> const&, std::__1::basic_string, std::__1::allocator> const&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x191c93) #6 0x7f182c619738 in get_ad_pack_raw_obs(SEXPREC*, Rcpp::Vector<19, Rcpp::PreserveStorage>, std::__1::basic_string, std::__1::allocator>) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x19738) #7 0x7f182c60769c in _adlaplace_get_ad_pack_raw_obs (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x769c) #8 0x5590103d8a22 in R_doDotCall (/data/localhost/ripley/R/R-clang/bin/exec/R+0x90a22) #9 0x55901042444a in bcEval_loop eval.c #10 0x55901041285b in bcEval eval.c #11 0x559010412014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #12 0x55901042a0e8 in R_execClosure eval.c #13 0x5590104295da in applyClosure_core eval.c #14 0x559010412f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #15 0x559010412467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #16 0x55901042f437 in do_set (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe7437) #17 0x55901041223f in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca23f) #18 0x559010430897 in do_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8897) #19 0x5590104191b3 in bcEval_loop eval.c #20 0x55901041285b in bcEval eval.c #21 0x559010412014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #22 0x559010412ab3 in forcePromise eval.c #23 0x5590104120dd in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca0dd) #24 0x559010430d76 in do_withVisible (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8d76) #25 0x559010474687 in do_internal (/data/localhost/ripley/R/R-clang/bin/exec/R+0x12c687) #26 0x559010419415 in bcEval_loop eval.c #27 0x55901041285b in bcEval eval.c #28 0x559010412014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #29 0x559010412ab3 in forcePromise eval.c #30 0x5590104120dd in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca0dd) #31 0x559010412ab3 in forcePromise eval.c #32 0x55901042654f in getvar eval.c #33 0x559010416c88 in bcEval_loop eval.c #34 0x55901041285b in bcEval eval.c #35 0x559010412014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #36 0x55901042a0e8 in R_execClosure eval.c #37 0x5590104295da in applyClosure_core eval.c #38 0x559010412f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #39 0x559010412467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #40 0x559010430897 in do_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8897) #41 0x5590104191b3 in bcEval_loop eval.c #42 0x55901041285b in bcEval eval.c #43 0x559010412014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #44 0x55901042a0e8 in R_execClosure eval.c #45 0x5590104295da in applyClosure_core eval.c #46 0x559010412f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #47 0x559010412467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #48 0x55901042a0e8 in R_execClosure eval.c #49 0x5590104295da in applyClosure_core eval.c #50 0x559010418a45 in bcEval_loop eval.c #51 0x55901041285b in bcEval eval.c #52 0x559010412014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #53 0x55901042a0e8 in R_execClosure eval.c #54 0x5590104295da in applyClosure_core eval.c #55 0x559010412f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #56 0x559010412467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #57 0x55901045f7d7 in Rf_ReplIteration (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1177d7) #58 0x5590104612ce in run_Rmainloop (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1192ce) #59 0x55901046133a in Rf_mainloop (/data/localhost/ripley/R/R-clang/bin/exec/R+0x11933a) #60 0x559010349db7 in main (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1db7) #61 0x7f183940a680 in __libc_start_call_main (/lib64/libc.so.6+0x3680) (BuildId: 85075e2ae2e13352a1413d41c327dacf6461526c) #62 0x7f183940a797 in __libc_start_main@GLIBC_2.2.5 (/lib64/libc.so.6+0x3797) (BuildId: 85075e2ae2e13352a1413d41c327dacf6461526c) #63 0x559010349cd4 in _start (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1cd4) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior /usr/local/clang23/bin/../include/c++/v1/__utility/swap.h:43:11 [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘adlaplace.Rmd’ --- re-building ‘bacteria.Rmd’ using rmarkdown /usr/local/clang23/bin/../include/c++/v1/__utility/swap.h:43:11: runtime error: load of value 33, which is not a valid value for type '__libcpp_remove_reference_t' (aka 'bool') #0 0x7f797a86140d in CppAD::ADFun::swap(CppAD::ADFun&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x6140d) #1 0x7f797a8f656a in CppAD::ADFun::ADFun(CppAD::ADFun&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf656a) #2 0x7f797a8f5611 in AdTape::AdTape(AdTape&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf5611) #3 0x7f797a8f9828 in adlaplace_make_ad_shard(AdTape&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf9828) #4 0x7f797a99038f in packs_to_ad_fun(std::__1::vector>&&, unsigned long, unsigned long, ad_shard* (*)(AdTape&&)) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x19038f) #5 0x7f797a991c93 in get_ad_pack_raw_obs_h(SEXPREC*, Rcpp::Vector<19, Rcpp::PreserveStorage> const&, std::__1::basic_string, std::__1::allocator> const&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x191c93) #6 0x7f797a819738 in get_ad_pack_raw_obs(SEXPREC*, Rcpp::Vector<19, Rcpp::PreserveStorage>, std::__1::basic_string, std::__1::allocator>) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x19738) #7 0x7f797a80769c in _adlaplace_get_ad_pack_raw_obs (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x769c) #8 0x560981918a22 in R_doDotCall (/data/localhost/ripley/R/R-clang/bin/exec/R+0x90a22) #9 0x56098196444a in bcEval_loop eval.c #10 0x56098195285b in bcEval eval.c #11 0x560981952014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #12 0x56098196a0e8 in R_execClosure eval.c #13 0x56098196ceda in R_execMethod (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe4eda) #14 0x7f79874746ba in R_dispatchGeneric (/data/localhost/ripley/R/R-clang/library/methods/libs/methods.so+0x16ba) #15 0x5609819b9469 in do_standardGeneric (/data/localhost/ripley/R/R-clang/bin/exec/R+0x131469) #16 0x5609819589b2 in bcEval_loop eval.c #17 0x56098195285b in bcEval eval.c #18 0x560981952014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #19 0x56098196a0e8 in R_execClosure eval.c #20 0x5609819695da in applyClosure_core eval.c #21 0x560981952f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #22 0x560981952467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #23 0x56098196f437 in do_set (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe7437) #24 0x56098195223f in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca23f) #25 0x560981970897 in do_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8897) #26 0x5609819591b3 in bcEval_loop eval.c #27 0x56098195285b in bcEval eval.c #28 0x560981952014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #29 0x560981952ab3 in forcePromise eval.c #30 0x5609819520dd in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca0dd) #31 0x560981970d76 in do_withVisible (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8d76) #32 0x5609819b4687 in do_internal (/data/localhost/ripley/R/R-clang/bin/exec/R+0x12c687) #33 0x560981959415 in bcEval_loop eval.c #34 0x56098195285b in bcEval eval.c #35 0x560981952014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #36 0x560981952ab3 in forcePromise eval.c #37 0x5609819520dd in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca0dd) #38 0x560981952ab3 in forcePromise eval.c #39 0x56098196654f in getvar eval.c #40 0x560981956c88 in bcEval_loop eval.c #41 0x56098195285b in bcEval eval.c #42 0x560981952014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #43 0x56098196a0e8 in R_execClosure eval.c #44 0x5609819695da in applyClosure_core eval.c #45 0x560981952f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #46 0x560981952467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #47 0x560981970897 in do_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8897) #48 0x5609819591b3 in bcEval_loop eval.c #49 0x56098195285b in bcEval eval.c #50 0x560981952014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #51 0x56098196a0e8 in R_execClosure eval.c #52 0x5609819695da in applyClosure_core eval.c #53 0x560981952f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #54 0x560981952467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #55 0x56098196a0e8 in R_execClosure eval.c #56 0x5609819695da in applyClosure_core eval.c #57 0x560981958a45 in bcEval_loop eval.c #58 0x56098195285b in bcEval eval.c #59 0x560981952014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #60 0x56098196a0e8 in R_execClosure eval.c #61 0x5609819695da in applyClosure_core eval.c #62 0x560981952f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #63 0x560981952467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #64 0x56098199f7d7 in Rf_ReplIteration (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1177d7) #65 0x5609819a12ce in run_Rmainloop (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1192ce) #66 0x5609819a133a in Rf_mainloop (/data/localhost/ripley/R/R-clang/bin/exec/R+0x11933a) #67 0x560981889db7 in main (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1db7) #68 0x7f798760a680 in __libc_start_call_main (/lib64/libc.so.6+0x3680) (BuildId: 85075e2ae2e13352a1413d41c327dacf6461526c) #69 0x7f798760a797 in __libc_start_main@GLIBC_2.2.5 (/lib64/libc.so.6+0x3797) (BuildId: 85075e2ae2e13352a1413d41c327dacf6461526c) #70 0x560981889cd4 in _start (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1cd4) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior /usr/local/clang23/bin/../include/c++/v1/__utility/swap.h:43:11 [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘bacteria.Rmd’ --- re-building ‘casecrossover.Rmd’ using rmarkdown /usr/local/clang23/bin/../include/c++/v1/__utility/swap.h:43:11: runtime error: load of value 2, which is not a valid value for type '__libcpp_remove_reference_t' (aka 'bool') #0 0x7fa3ce46140d in CppAD::ADFun::swap(CppAD::ADFun&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x6140d) #1 0x7fa3ce4f656a in CppAD::ADFun::ADFun(CppAD::ADFun&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf656a) #2 0x7fa3ce4f5611 in AdTape::AdTape(AdTape&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf5611) #3 0x7fa3ce4f9828 in adlaplace_make_ad_shard(AdTape&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf9828) #4 0x7fa3ce59038f in packs_to_ad_fun(std::__1::vector>&&, unsigned long, unsigned long, ad_shard* (*)(AdTape&&)) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x19038f) #5 0x7fa3ce591c93 in get_ad_pack_raw_obs_h(SEXPREC*, Rcpp::Vector<19, Rcpp::PreserveStorage> const&, std::__1::basic_string, std::__1::allocator> const&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x191c93) #6 0x7fa3ce419738 in get_ad_pack_raw_obs(SEXPREC*, Rcpp::Vector<19, Rcpp::PreserveStorage>, std::__1::basic_string, std::__1::allocator>) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x19738) #7 0x7fa3ce40769c in _adlaplace_get_ad_pack_raw_obs (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x769c) #8 0x55b7e4826a22 in R_doDotCall (/data/localhost/ripley/R/R-clang/bin/exec/R+0x90a22) #9 0x55b7e487244a in bcEval_loop eval.c #10 0x55b7e486085b in bcEval eval.c #11 0x55b7e4860014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #12 0x55b7e48780e8 in R_execClosure eval.c #13 0x55b7e487aeda in R_execMethod (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe4eda) #14 0x7fa3db07b6ba in R_dispatchGeneric (/data/localhost/ripley/R/R-clang/library/methods/libs/methods.so+0x16ba) #15 0x55b7e48c7469 in do_standardGeneric (/data/localhost/ripley/R/R-clang/bin/exec/R+0x131469) #16 0x55b7e48669b2 in bcEval_loop eval.c #17 0x55b7e486085b in bcEval eval.c #18 0x55b7e4860014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #19 0x55b7e48780e8 in R_execClosure eval.c #20 0x55b7e48775da in applyClosure_core eval.c #21 0x55b7e4860f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #22 0x55b7e4860467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #23 0x55b7e487d437 in do_set (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe7437) #24 0x55b7e486023f in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca23f) #25 0x55b7e487e897 in do_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8897) #26 0x55b7e48671b3 in bcEval_loop eval.c #27 0x55b7e486085b in bcEval eval.c #28 0x55b7e4860014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #29 0x55b7e4860ab3 in forcePromise eval.c #30 0x55b7e48600dd in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca0dd) #31 0x55b7e487ed76 in do_withVisible (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8d76) #32 0x55b7e48c2687 in do_internal (/data/localhost/ripley/R/R-clang/bin/exec/R+0x12c687) #33 0x55b7e4867415 in bcEval_loop eval.c #34 0x55b7e486085b in bcEval eval.c #35 0x55b7e4860014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #36 0x55b7e4860ab3 in forcePromise eval.c #37 0x55b7e48600dd in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca0dd) #38 0x55b7e4860ab3 in forcePromise eval.c #39 0x55b7e487454f in getvar eval.c #40 0x55b7e4864c88 in bcEval_loop eval.c #41 0x55b7e486085b in bcEval eval.c #42 0x55b7e4860014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #43 0x55b7e48780e8 in R_execClosure eval.c #44 0x55b7e48775da in applyClosure_core eval.c #45 0x55b7e4860f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #46 0x55b7e4860467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #47 0x55b7e487e897 in do_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8897) #48 0x55b7e48671b3 in bcEval_loop eval.c #49 0x55b7e486085b in bcEval eval.c #50 0x55b7e4860014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #51 0x55b7e48780e8 in R_execClosure eval.c #52 0x55b7e48775da in applyClosure_core eval.c #53 0x55b7e4860f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #54 0x55b7e4860467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #55 0x55b7e48780e8 in R_execClosure eval.c #56 0x55b7e48775da in applyClosure_core eval.c #57 0x55b7e4866a45 in bcEval_loop eval.c #58 0x55b7e486085b in bcEval eval.c #59 0x55b7e4860014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #60 0x55b7e48780e8 in R_execClosure eval.c #61 0x55b7e48775da in applyClosure_core eval.c #62 0x55b7e4860f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #63 0x55b7e4860467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #64 0x55b7e48ad7d7 in Rf_ReplIteration (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1177d7) #65 0x55b7e48af2ce in run_Rmainloop (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1192ce) #66 0x55b7e48af33a in Rf_mainloop (/data/localhost/ripley/R/R-clang/bin/exec/R+0x11933a) #67 0x55b7e4797db7 in main (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1db7) #68 0x7fa3db30b680 in __libc_start_call_main (/lib64/libc.so.6+0x3680) (BuildId: 85075e2ae2e13352a1413d41c327dacf6461526c) #69 0x7fa3db30b797 in __libc_start_main@GLIBC_2.2.5 (/lib64/libc.so.6+0x3797) (BuildId: 85075e2ae2e13352a1413d41c327dacf6461526c) #70 0x55b7e4797cd4 in _start (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1cd4) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior /usr/local/clang23/bin/../include/c++/v1/__utility/swap.h:43:11 [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘casecrossover.Rmd’ --- re-building ‘casecrossover_amip.Rmd’ using rmarkdown /usr/local/clang23/bin/../include/c++/v1/__utility/swap.h:43:11: runtime error: load of value 7, which is not a valid value for type '__libcpp_remove_reference_t' (aka 'bool') #0 0x7f2d03261471 in CppAD::ADFun::swap(CppAD::ADFun&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x61471) #1 0x7f2d032f656a in CppAD::ADFun::ADFun(CppAD::ADFun&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf656a) #2 0x7f2d032f5611 in AdTape::AdTape(AdTape&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf5611) #3 0x7f2d032f9828 in adlaplace_make_ad_shard(AdTape&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf9828) #4 0x7f2d0339038f in packs_to_ad_fun(std::__1::vector>&&, unsigned long, unsigned long, ad_shard* (*)(AdTape&&)) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x19038f) #5 0x7f2d03391c93 in get_ad_pack_raw_obs_h(SEXPREC*, Rcpp::Vector<19, Rcpp::PreserveStorage> const&, std::__1::basic_string, std::__1::allocator> const&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x191c93) #6 0x7f2d03219738 in get_ad_pack_raw_obs(SEXPREC*, Rcpp::Vector<19, Rcpp::PreserveStorage>, std::__1::basic_string, std::__1::allocator>) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x19738) #7 0x7f2d0320769c in _adlaplace_get_ad_pack_raw_obs (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x769c) #8 0x559435c9ca22 in R_doDotCall (/data/localhost/ripley/R/R-clang/bin/exec/R+0x90a22) #9 0x559435ce844a in bcEval_loop eval.c #10 0x559435cd685b in bcEval eval.c #11 0x559435cd6014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #12 0x559435cee0e8 in R_execClosure eval.c #13 0x559435cf0eda in R_execMethod (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe4eda) #14 0x7f2d107b06ba in R_dispatchGeneric (/data/localhost/ripley/R/R-clang/library/methods/libs/methods.so+0x16ba) #15 0x559435d3d469 in do_standardGeneric (/data/localhost/ripley/R/R-clang/bin/exec/R+0x131469) #16 0x559435cdc9b2 in bcEval_loop eval.c #17 0x559435cd685b in bcEval eval.c #18 0x559435cd6014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #19 0x559435cee0e8 in R_execClosure eval.c #20 0x559435ced5da in applyClosure_core eval.c #21 0x559435cd6f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #22 0x559435cd6467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #23 0x559435cf3437 in do_set (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe7437) #24 0x559435cd623f in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca23f) #25 0x559435cf4897 in do_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8897) #26 0x559435cdd1b3 in bcEval_loop eval.c #27 0x559435cd685b in bcEval eval.c #28 0x559435cd6014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #29 0x559435cd6ab3 in forcePromise eval.c #30 0x559435cd60dd in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca0dd) #31 0x559435cf4d76 in do_withVisible (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8d76) #32 0x559435d38687 in do_internal (/data/localhost/ripley/R/R-clang/bin/exec/R+0x12c687) #33 0x559435cdd415 in bcEval_loop eval.c #34 0x559435cd685b in bcEval eval.c #35 0x559435cd6014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #36 0x559435cd6ab3 in forcePromise eval.c #37 0x559435cd60dd in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca0dd) #38 0x559435cd6ab3 in forcePromise eval.c #39 0x559435cea54f in getvar eval.c #40 0x559435cdac88 in bcEval_loop eval.c #41 0x559435cd685b in bcEval eval.c #42 0x559435cd6014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #43 0x559435cee0e8 in R_execClosure eval.c #44 0x559435ced5da in applyClosure_core eval.c #45 0x559435cd6f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #46 0x559435cd6467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #47 0x559435cf4897 in do_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8897) #48 0x559435cdd1b3 in bcEval_loop eval.c #49 0x559435cd685b in bcEval eval.c #50 0x559435cd6014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #51 0x559435cee0e8 in R_execClosure eval.c #52 0x559435ced5da in applyClosure_core eval.c #53 0x559435cd6f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #54 0x559435cd6467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #55 0x559435cee0e8 in R_execClosure eval.c #56 0x559435ced5da in applyClosure_core eval.c #57 0x559435cdca45 in bcEval_loop eval.c #58 0x559435cd685b in bcEval eval.c #59 0x559435cd6014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #60 0x559435cee0e8 in R_execClosure eval.c #61 0x559435ced5da in applyClosure_core eval.c #62 0x559435cd6f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #63 0x559435cd6467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #64 0x559435d237d7 in Rf_ReplIteration (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1177d7) #65 0x559435d252ce in run_Rmainloop (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1192ce) #66 0x559435d2533a in Rf_mainloop (/data/localhost/ripley/R/R-clang/bin/exec/R+0x11933a) #67 0x559435c0ddb7 in main (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1db7) #68 0x7f2d1010b680 in __libc_start_call_main (/lib64/libc.so.6+0x3680) (BuildId: 85075e2ae2e13352a1413d41c327dacf6461526c) #69 0x7f2d1010b797 in __libc_start_main@GLIBC_2.2.5 (/lib64/libc.so.6+0x3797) (BuildId: 85075e2ae2e13352a1413d41c327dacf6461526c) #70 0x559435c0dcd4 in _start (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1cd4) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior /usr/local/clang23/bin/../include/c++/v1/__utility/swap.h:43:11 [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘casecrossover_amip.Rmd’ --- re-building ‘dirichlet_multinom.Rmd’ using rmarkdown [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘dirichlet_multinom.Rmd’ --- re-building ‘gamm.Rmd’ using rmarkdown /usr/local/clang23/bin/../include/c++/v1/__utility/swap.h:43:11: runtime error: load of value 119, which is not a valid value for type '__libcpp_remove_reference_t' (aka 'bool') #0 0x7f1716c6140d in CppAD::ADFun::swap(CppAD::ADFun&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x6140d) #1 0x7f1716cf656a in CppAD::ADFun::ADFun(CppAD::ADFun&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf656a) #2 0x7f1716cf5611 in AdTape::AdTape(AdTape&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf5611) #3 0x7f1716cf9828 in adlaplace_make_ad_shard(AdTape&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf9828) #4 0x7f1716d9038f in packs_to_ad_fun(std::__1::vector>&&, unsigned long, unsigned long, ad_shard* (*)(AdTape&&)) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x19038f) #5 0x7f1716d91c93 in get_ad_pack_raw_obs_h(SEXPREC*, Rcpp::Vector<19, Rcpp::PreserveStorage> const&, std::__1::basic_string, std::__1::allocator> const&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x191c93) #6 0x7f1716c19738 in get_ad_pack_raw_obs(SEXPREC*, Rcpp::Vector<19, Rcpp::PreserveStorage>, std::__1::basic_string, std::__1::allocator>) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x19738) #7 0x7f1716c0769c in _adlaplace_get_ad_pack_raw_obs (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x769c) #8 0x5649eeb03a22 in R_doDotCall (/data/localhost/ripley/R/R-clang/bin/exec/R+0x90a22) #9 0x5649eeb4f44a in bcEval_loop eval.c #10 0x5649eeb3d85b in bcEval eval.c #11 0x5649eeb3d014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #12 0x5649eeb550e8 in R_execClosure eval.c #13 0x5649eeb57eda in R_execMethod (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe4eda) #14 0x7f172190a6ba in R_dispatchGeneric (/data/localhost/ripley/R/R-clang/library/methods/libs/methods.so+0x16ba) #15 0x5649eeba4469 in do_standardGeneric (/data/localhost/ripley/R/R-clang/bin/exec/R+0x131469) #16 0x5649eeb439b2 in bcEval_loop eval.c #17 0x5649eeb3d85b in bcEval eval.c #18 0x5649eeb3d014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #19 0x5649eeb550e8 in R_execClosure eval.c #20 0x5649eeb545da in applyClosure_core eval.c #21 0x5649eeb3df26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #22 0x5649eeb3d467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #23 0x5649eeb5a437 in do_set (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe7437) #24 0x5649eeb3d23f in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca23f) #25 0x5649eeb5b897 in do_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8897) #26 0x5649eeb441b3 in bcEval_loop eval.c #27 0x5649eeb3d85b in bcEval eval.c #28 0x5649eeb3d014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #29 0x5649eeb3dab3 in forcePromise eval.c #30 0x5649eeb3d0dd in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca0dd) #31 0x5649eeb5bd76 in do_withVisible (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8d76) #32 0x5649eeb9f687 in do_internal (/data/localhost/ripley/R/R-clang/bin/exec/R+0x12c687) #33 0x5649eeb44415 in bcEval_loop eval.c #34 0x5649eeb3d85b in bcEval eval.c #35 0x5649eeb3d014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #36 0x5649eeb3dab3 in forcePromise eval.c #37 0x5649eeb3d0dd in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca0dd) #38 0x5649eeb3dab3 in forcePromise eval.c #39 0x5649eeb5154f in getvar eval.c #40 0x5649eeb41c88 in bcEval_loop eval.c #41 0x5649eeb3d85b in bcEval eval.c #42 0x5649eeb3d014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #43 0x5649eeb550e8 in R_execClosure eval.c #44 0x5649eeb545da in applyClosure_core eval.c #45 0x5649eeb3df26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #46 0x5649eeb3d467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #47 0x5649eeb5b897 in do_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8897) #48 0x5649eeb441b3 in bcEval_loop eval.c #49 0x5649eeb3d85b in bcEval eval.c #50 0x5649eeb3d014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #51 0x5649eeb550e8 in R_execClosure eval.c #52 0x5649eeb545da in applyClosure_core eval.c #53 0x5649eeb3df26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #54 0x5649eeb3d467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #55 0x5649eeb550e8 in R_execClosure eval.c #56 0x5649eeb545da in applyClosure_core eval.c #57 0x5649eeb43a45 in bcEval_loop eval.c #58 0x5649eeb3d85b in bcEval eval.c #59 0x5649eeb3d014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #60 0x5649eeb550e8 in R_execClosure eval.c #61 0x5649eeb545da in applyClosure_core eval.c #62 0x5649eeb3df26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #63 0x5649eeb3d467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #64 0x5649eeb8a7d7 in Rf_ReplIteration (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1177d7) #65 0x5649eeb8c2ce in run_Rmainloop (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1192ce) #66 0x5649eeb8c33a in Rf_mainloop (/data/localhost/ripley/R/R-clang/bin/exec/R+0x11933a) #67 0x5649eea74db7 in main (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1db7) #68 0x7f1723b0b680 in __libc_start_call_main (/lib64/libc.so.6+0x3680) (BuildId: 85075e2ae2e13352a1413d41c327dacf6461526c) #69 0x7f1723b0b797 in __libc_start_main@GLIBC_2.2.5 (/lib64/libc.so.6+0x3797) (BuildId: 85075e2ae2e13352a1413d41c327dacf6461526c) #70 0x5649eea74cd4 in _start (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1cd4) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior /usr/local/clang23/bin/../include/c++/v1/__utility/swap.h:43:11 [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘gamm.Rmd’ --- re-building ‘germany.Rmd’ using rmarkdown /usr/local/clang23/bin/../include/c++/v1/__utility/swap.h:43:11: runtime error: load of value 192, which is not a valid value for type '__libcpp_remove_reference_t' (aka 'bool') #0 0x7f22cb66140d in CppAD::ADFun::swap(CppAD::ADFun&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x6140d) #1 0x7f22cb6f656a in CppAD::ADFun::ADFun(CppAD::ADFun&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf656a) #2 0x7f22cb6f5611 in AdTape::AdTape(AdTape&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf5611) #3 0x7f22cb6f6777 in AdTape* std::__1::vector>::__emplace_back_slow_path[abi:nqe230104](AdTape&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf6777) #4 0x7f22cb6f536c in AdTape& std::__1::vector>::emplace_back[abi:nqe230104](AdTape&&) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xf536c) #5 0x7f22cb620ebb in create_ad_shard_random_diagonal(SEXPREC*, Rcpp::Vector<19, Rcpp::PreserveStorage>) (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0x20ebb) #6 0x7f22cb60b3e0 in _adlaplace_create_ad_shard_random_diagonal (/data/localhost/ripley/R/packages/tests-clang-UBSAN/adlaplace.Rcheck/adlaplace/libs/adlaplace.so+0xb3e0) #7 0x5600e9009893 in R_doDotCall (/data/localhost/ripley/R/R-clang/bin/exec/R+0x90893) #8 0x5600e905544a in bcEval_loop eval.c #9 0x5600e904385b in bcEval eval.c #10 0x5600e9043014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #11 0x5600e905b0e8 in R_execClosure eval.c #12 0x5600e905a5da in applyClosure_core eval.c #13 0x5600e9043f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #14 0x5600e9043467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #15 0x5600e9060437 in do_set (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe7437) #16 0x5600e904323f in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca23f) #17 0x5600e9061897 in do_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8897) #18 0x5600e904a1b3 in bcEval_loop eval.c #19 0x5600e904385b in bcEval eval.c #20 0x5600e9043014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #21 0x5600e9043ab3 in forcePromise eval.c #22 0x5600e90430dd in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca0dd) #23 0x5600e9061d76 in do_withVisible (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8d76) #24 0x5600e90a5687 in do_internal (/data/localhost/ripley/R/R-clang/bin/exec/R+0x12c687) #25 0x5600e904a415 in bcEval_loop eval.c #26 0x5600e904385b in bcEval eval.c #27 0x5600e9043014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #28 0x5600e9043ab3 in forcePromise eval.c #29 0x5600e90430dd in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca0dd) #30 0x5600e9043ab3 in forcePromise eval.c #31 0x5600e905754f in getvar eval.c #32 0x5600e9047c88 in bcEval_loop eval.c #33 0x5600e904385b in bcEval eval.c #34 0x5600e9043014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #35 0x5600e905b0e8 in R_execClosure eval.c #36 0x5600e905a5da in applyClosure_core eval.c #37 0x5600e9043f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #38 0x5600e9043467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #39 0x5600e9061897 in do_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xe8897) #40 0x5600e904a1b3 in bcEval_loop eval.c #41 0x5600e904385b in bcEval eval.c #42 0x5600e9043014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #43 0x5600e905b0e8 in R_execClosure eval.c #44 0x5600e905a5da in applyClosure_core eval.c #45 0x5600e9043f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #46 0x5600e9043467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #47 0x5600e905b0e8 in R_execClosure eval.c #48 0x5600e905a5da in applyClosure_core eval.c #49 0x5600e9049a45 in bcEval_loop eval.c #50 0x5600e904385b in bcEval eval.c #51 0x5600e9043014 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca014) #52 0x5600e905b0e8 in R_execClosure eval.c #53 0x5600e905a5da in applyClosure_core eval.c #54 0x5600e9043f26 in Rf_applyClosure (/data/localhost/ripley/R/R-clang/bin/exec/R+0xcaf26) #55 0x5600e9043467 in Rf_eval (/data/localhost/ripley/R/R-clang/bin/exec/R+0xca467) #56 0x5600e90907d7 in Rf_ReplIteration (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1177d7) #57 0x5600e90922ce in run_Rmainloop (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1192ce) #58 0x5600e909233a in Rf_mainloop (/data/localhost/ripley/R/R-clang/bin/exec/R+0x11933a) #59 0x5600e8f7adb7 in main (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1db7) #60 0x7f22d850b680 in __libc_start_call_main (/lib64/libc.so.6+0x3680) (BuildId: 85075e2ae2e13352a1413d41c327dacf6461526c) #61 0x7f22d850b797 in __libc_start_main@GLIBC_2.2.5 (/lib64/libc.so.6+0x3797) (BuildId: 85075e2ae2e13352a1413d41c327dacf6461526c) #62 0x5600e8f7acd4 in _start (/data/localhost/ripley/R/R-clang/bin/exec/R+0x1cd4) SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior /usr/local/clang23/bin/../include/c++/v1/__utility/swap.h:43:11 [WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead. --- finished re-building ‘germany.Rmd’