* using log directory ‘/data/gannet/ripley/R/packages/tests-clang-SAN/FactoRizationMachines.Rcheck’ * using R Under development (unstable) (2018-02-09 r74240) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘FactoRizationMachines/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘FactoRizationMachines’ version ‘0.35’ * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package ‘FactoRizationMachines’ can be installed ... [147s/136s] OK * checking package directory ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking compiled code ... OK * checking examples ... ERROR Running examples in ‘FactoRizationMachines-Ex.R’ failed The error most likely occurred in: > ### Name: predict.FMmodel > ### Title: Predict Method for FMmodel Objects > ### Aliases: predict.FMmodel > > ### ** Examples > > > ### Example to illustrate the usage of the method > ### Data set very small and not sparse, results not representative > ### Please study major example in general help 'FactoRizationMachines' > > # Load data set > library(FactoRizationMachines) > library(MASS) > data("Boston") > > # Subset data to training and test data > set.seed(123) > subset=sample.int(nrow(Boston),nrow(trees)*.8) > data.train=Boston[subset,-ncol(Boston)] > target.train=Boston[subset,ncol(Boston)] > data.test=Boston[-subset,-ncol(Boston)] > target.test=Boston[-subset,ncol(Boston)] > > > # Predict with 10 second-order and 5 third-order factor > model=HoFM.train(data.train,target.train) /usr/local/bin/../include/c++/v1/vector:1504:12: runtime error: addition of unsigned offset to 0x602000034ed0 overflowed to 0x602000034ec8 SUMMARY: UndefinedBehaviorSanitizer: undefined-behavior /usr/local/bin/../include/c++/v1/vector:1504:12 in ================================================================= ==36283==ERROR: AddressSanitizer: heap-buffer-overflow on address 0x602000034ec8 at pc 0x7ff8ee675493 bp 0x7ffd219566b0 sp 0x7ffd219566a8 READ of size 8 at 0x602000034ec8 thread T0 #0 0x7ff8ee675492 in trainFM(Rcpp::Vector<19, Rcpp::PreserveStorage>) /data/gannet/ripley/R/packages/tests-clang-SAN/FactoRizationMachines/src/FactoRizationMachines.cpp:4:22500 #1 0x7ff8ee715f20 in _FactoRizationMachines_trainFM /data/gannet/ripley/R/packages/tests-clang-SAN/FactoRizationMachines/src/RcppExports.cpp:15:34 #2 0x7e5099 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:570:17 #3 0x9ca702 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7273:21 #4 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #5 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #6 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #7 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #8 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #9 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #10 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #11 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #12 0x9b2184 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:747:12 #13 0xa338dc in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2774:8 #14 0x9b1bbd in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:699:12 #15 0xb1e343 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:258:2 #16 0xb232c0 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:308:11 #17 0xb230a5 in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1082:5 #18 0x52a08a in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29:5 #19 0x7ff8ff4cb889 in __libc_start_main (/lib64/libc.so.6+0x20889) #20 0x42d829 in _start (/data/gannet/ripley/R/R-clang-SAN/bin/exec/R+0x42d829) 0x602000034ec8 is located 8 bytes to the left of 8-byte region [0x602000034ed0,0x602000034ed8) allocated by thread T0 here: #0 0x525c70 in operator new(unsigned long) /data/gannet/ripley/Sources/LLVM/6.0.x/trunk/projects/compiler-rt/lib/asan/asan_new_delete.cc:92 #1 0x7ff8ee6f59de in std::__1::__allocate(unsigned long) /usr/local/bin/../include/c++/v1/new:228:10 #2 0x7ff8ee6f59de in std::__1::allocator::allocate(unsigned long, void const*) /usr/local/bin/../include/c++/v1/memory:1793 #3 0x7ff8ee6f59de in std::__1::allocator_traits >::allocate(std::__1::allocator&, unsigned long) /usr/local/bin/../include/c++/v1/memory:1547 #4 0x7ff8ee6f59de in std::__1::__split_buffer&>::__split_buffer(unsigned long, unsigned long, std::__1::allocator&) /usr/local/bin/../include/c++/v1/__split_buffer:311 #5 0x7ff8ee6f529d in std::__1::vector >::__append(unsigned long) /usr/local/bin/../include/c++/v1/vector:1047:53 #6 0x7ff8ee5e9bf4 in trainFM(Rcpp::Vector<19, Rcpp::PreserveStorage>) /data/gannet/ripley/R/packages/tests-clang-SAN/FactoRizationMachines/src/FactoRizationMachines.cpp:4:3037 #7 0x7ff8ee715f20 in _FactoRizationMachines_trainFM /data/gannet/ripley/R/packages/tests-clang-SAN/FactoRizationMachines/src/RcppExports.cpp:15:34 #8 0x7e5099 in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:570:17 #9 0x9ca702 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7273:21 #10 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #11 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #12 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #13 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #14 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #15 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #16 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #17 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #18 0x9b2184 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:747:12 #19 0xa338dc in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2774:8 #20 0x9b1bbd in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:699:12 #21 0xb1e343 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:258:2 #22 0xb232c0 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:308:11 #23 0xb230a5 in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1082:5 #24 0x52a08a in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29:5 #25 0x7ff8ff4cb889 in __libc_start_main (/lib64/libc.so.6+0x20889) SUMMARY: AddressSanitizer: heap-buffer-overflow /data/gannet/ripley/R/packages/tests-clang-SAN/FactoRizationMachines/src/FactoRizationMachines.cpp:4:22500 in trainFM(Rcpp::Vector<19, Rcpp::PreserveStorage>) Shadow bytes around the buggy address: 0x0c047fffe980: fa fa fd fd fa fa fd fd fa fa fd fa fa fa fd fa 0x0c047fffe990: fa fa fd fa fa fa fd fd fa fa fd fd fa fa fd fa 0x0c047fffe9a0: fa fa fd fa fa fa fd fa fa fa fd fd fa fa fd fd 0x0c047fffe9b0: fa fa fd fa fa fa fd fa fa fa fd fa fa fa fd fd 0x0c047fffe9c0: fa fa fd fd fa fa fd fa fa fa fd fa fa fa fd fa =>0x0c047fffe9d0: fa fa fd fd fa fa fd fd fa[fa]00 fa fa fa 00 fa 0x0c047fffe9e0: fa fa 00 fa fa fa 00 fa fa fa 00 fa fa fa 00 fa 0x0c047fffe9f0: fa fa 00 fa fa fa 00 fa fa fa 00 fa fa fa 00 fa 0x0c047fffea00: fa fa 00 fa fa fa 00 fa fa fa 00 fa fa fa 00 fa 0x0c047fffea10: fa fa 00 fa fa fa 00 fa fa fa 00 fa fa fa 00 fa 0x0c047fffea20: fa fa 00 fa fa fa 00 fa fa fa 00 fa fa fa 00 fa Shadow byte legend (one shadow byte represents 8 application bytes): Addressable: 00 Partially addressable: 01 02 03 04 05 06 07 Heap left redzone: fa Freed heap region: fd Stack left redzone: f1 Stack mid redzone: f2 Stack right redzone: f3 Stack after return: f5 Stack use after scope: f8 Global redzone: f9 Global init order: f6 Poisoned by user: f7 Container overflow: fc Array cookie: ac Intra object redzone: bb ASan internal: fe Left alloca redzone: ca Right alloca redzone: cb ==36283==ABORTING * DONE Status: 1 ERROR