* using log directory ‘/data/gannet/ripley/R/packages/tests-clang-SAN/bw.Rcheck’ * using R Under development (unstable) (2018-07-15 r74966) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘bw/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘bw’ version ‘1.0.0’ * package encoding: UTF-8 * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package ‘bw’ can be installed ... [141s/116s] OK * checking package directory ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking compiled code ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [36s/36s] OK * checking tests ... [15s/15s] ERROR Running ‘testthat.R’ [13s/14s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(bw) Please cite the package as: Dalia Camacho-Garcia-Formenti and Rodrigo Zepeda-Tello (2018). bw: Dynamic Body Weight Models for Children and Adults. R package version 1.0.0. Feel free to contact us with any questions. > > test_check("bw") ================================================================= ==36217==ERROR: AddressSanitizer: heap-buffer-overflow on address 0x62500d07c018 at pc 0x7f4b0a287355 bp 0x7ffecd23ef20 sp 0x7ffecd23ef18 READ of size 8 at 0x62500d07c018 thread T0 #0 0x7f4b0a287354 in Rcpp::sugar::Plus_Vector_Vector<14, true, Rcpp::Vector<14, Rcpp::PreserveStorage>, true, Rcpp::Vector<14, Rcpp::PreserveStorage> >::operator[](long) const /data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/sugar/operators/plus.h:72:20 #1 0x7f4b0a296a53 in void Rcpp::Vector<14, Rcpp::PreserveStorage>::import_expression, true, Rcpp::Vector<14, Rcpp::PreserveStorage> > >(Rcpp::sugar::Plus_Vector_Vector<14, true, Rcpp::Vector<14, Rcpp::PreserveStorage>, true, Rcpp::Vector<14, Rcpp::PreserveStorage> > const&, long) /data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/vector/Vector.h:1083:9 #2 0x7f4b0a27920c in Rcpp::Vector<14, Rcpp::PreserveStorage>::Vector, true, Rcpp::Vector<14, Rcpp::PreserveStorage> > >(Rcpp::VectorBase<14, true, Rcpp::sugar::Plus_Vector_Vector<14, true, Rcpp::Vector<14, Rcpp::PreserveStorage>, true, Rcpp::Vector<14, Rcpp::PreserveStorage> > > const&) /data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/vector/Vector.h:164:9 #3 0x7f4b0a26b478 in Adult::TotalIntake(double) /data/gannet/ripley/R/packages/tests-clang-SAN/bw/src/adult_weight.cpp:343:12 #4 0x7f4b0a26a217 in Adult::CI(double) /data/gannet/ripley/R/packages/tests-clang-SAN/bw/src/adult_weight.cpp:338:20 #5 0x7f4b0a26aaf9 in Adult::dECF(double, Rcpp::Vector<14, Rcpp::PreserveStorage>) /data/gannet/ripley/R/packages/tests-clang-SAN/bw/src/adult_weight.cpp:326:66 #6 0x7f4b0a270bfb in Adult::rk4(double) /data/gannet/ripley/R/packages/tests-clang-SAN/bw/src/adult_weight.cpp:484:14 #7 0x7f4b0a2b08dc in adult_weight_wrapper_EI(Rcpp::Vector<14, Rcpp::PreserveStorage>, Rcpp::Vector<14, Rcpp::PreserveStorage>, Rcpp::Vector<14, Rcpp::PreserveStorage>, Rcpp::Vector<14, Rcpp::PreserveStorage>, Rcpp::Matrix<14, Rcpp::PreserveStorage>, Rcpp::Matrix<14, Rcpp::PreserveStorage>, Rcpp::Vector<14, Rcpp::PreserveStorage>, Rcpp::Vector<14, Rcpp::PreserveStorage>, Rcpp::Vector<14, Rcpp::PreserveStorage>, double, Rcpp::Vector<14, Rcpp::PreserveStorage>, double, bool, bool) /data/gannet/ripley/R/packages/tests-clang-SAN/bw/src/adult_weight_wrapper.cpp:94:19 #8 0x7f4b0a22b628 in _bw_adult_weight_wrapper_EI /data/gannet/ripley/R/packages/tests-clang-SAN/bw/src/RcppExports.cpp:50:34 #9 0x7e754a in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c #10 0x8595bd in do_dotcall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:1252:11 #11 0x9c488a in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6787:14 #12 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #13 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #14 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #15 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #16 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #17 0x9b0304 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:747:12 #18 0xa31ccc in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2791:8 #19 0x9afd3d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:699:12 #20 0xa301ed in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2408:10 #21 0x9afd3d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:699:12 #22 0xa3b63c in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3170:13 #23 0x9c488a in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6787:14 #24 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #25 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #26 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #27 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #28 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #29 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #30 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #31 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #32 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #33 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #34 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #35 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #36 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #37 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #38 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #39 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #40 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #41 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #42 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #43 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #44 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #45 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #46 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #47 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #48 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #49 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #50 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #51 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #52 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #53 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #54 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #55 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #56 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #57 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #58 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #59 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #60 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #61 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #62 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #63 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #64 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #65 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #66 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #67 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #68 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #69 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #70 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #71 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #72 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #73 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #74 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #75 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #76 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #77 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #78 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #79 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #80 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #81 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #82 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #83 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #84 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #85 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #86 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #87 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #88 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #89 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #90 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #91 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #92 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #93 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #94 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #95 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #96 0x9b0304 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:747:12 #97 0xa3bfb1 in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3194:9 #98 0x9c488a in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6787:14 #99 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #100 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #101 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #102 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #103 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #104 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #105 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #106 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #107 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #108 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #109 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #110 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #111 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #112 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #113 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #114 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #115 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #116 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #117 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #118 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #119 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #120 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #121 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #122 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #123 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #124 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #125 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #126 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #127 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #128 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #129 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #130 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #131 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #132 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #133 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #134 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #135 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #136 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #137 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #138 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #139 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #140 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #141 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #142 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #143 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #144 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #145 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #146 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #147 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #148 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #149 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #150 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #151 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #152 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #153 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #154 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #155 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #156 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #157 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #158 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #159 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #160 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #161 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #162 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #163 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #164 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #165 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #166 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #167 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #168 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #169 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #170 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #171 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #172 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #173 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #174 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #175 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #176 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #177 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #178 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #179 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #180 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #181 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #182 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #183 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #184 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #185 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #186 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #187 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #188 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #189 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #190 0xa24a91 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1844:8 #191 0x5866e0 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:70:8 #192 0xb90929 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1370:11 #193 0x9c122c in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6807:15 #194 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #195 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #196 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #197 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #198 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #199 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #200 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #201 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #202 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #203 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #204 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #205 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #206 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #207 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #208 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #209 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #210 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #211 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #212 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #213 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #214 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #215 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #216 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #217 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #218 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #219 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #220 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #221 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #222 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #223 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #224 0x9b0304 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:747:12 #225 0xb1bae0 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:258:2 #226 0xb207e0 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:308:11 #227 0xb205c5 in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1082:5 #228 0x52a2ea in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29:5 #229 0x7f4b1d13d18a in __libc_start_main (/lib64/libc.so.6+0x2318a) #230 0x42da79 in _start (/data/gannet/ripley/R/R-clang-SAN/bin/exec/R+0x42da79) 0x62500d07c018 is located 0 bytes to the right of 7960-byte region [0x62500d07a100,0x62500d07c018) allocated by thread T0 here: #0 0x4ed930 in __interceptor_malloc /data/gannet/ripley/Sources/LLVM/6.0.x/trunk/projects/compiler-rt/lib/asan/asan_malloc_linux.cc:88 #1 0xb3c2f8 in GetNewPage /data/gannet/ripley/R/svn/R-devel/src/main/memory.c:888:12 #2 0xb430e2 in Rf_allocVector3 /data/gannet/ripley/R/svn/R-devel/src/main/memory.c:2725:6 #3 0xcf2634 in Rf_allocVector /data/gannet/ripley/R/svn/R-devel/src/include/Rinlinedfuns.h:577:12 #4 0xcf2634 in rep3 /data/gannet/ripley/R/svn/R-devel/src/main/seq.c:289 #5 0xcf6666 in do_rep /data/gannet/ripley/R/svn/R-devel/src/main/seq.c:756:5 #6 0x9afd3d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:699:12 #7 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #8 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #9 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #10 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #11 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #12 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #13 0x9b0304 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:747:12 #14 0xa31ccc in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2791:8 #15 0x9afd3d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:699:12 #16 0xa301ed in do_begin /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2408:10 #17 0x9afd3d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:699:12 #18 0xa3b63c in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3170:13 #19 0x9c488a in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6787:14 #20 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #21 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #22 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 #23 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #24 0xa1b73a in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #25 0xa61ca2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4984:15 #26 0xa620eb in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5026:10 #27 0x9dc8db in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6519:20 #28 0x9af12d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #29 0xa22bc6 in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #30 0x9d3ef8 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6755:12 SUMMARY: AddressSanitizer: heap-buffer-overflow /data/gannet/ripley/R/test-clang/Rcpp/include/Rcpp/sugar/operators/plus.h:72:20 in Rcpp::sugar::Plus_Vector_Vector<14, true, Rcpp::Vector<14, Rcpp::PreserveStorage>, true, Rcpp::Vector<14, Rcpp::PreserveStorage> >::operator[](long) const Shadow bytes around the buggy address: 0x0c4a81a077b0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 0x0c4a81a077c0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 0x0c4a81a077d0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 0x0c4a81a077e0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 0x0c4a81a077f0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 =>0x0c4a81a07800: 00 00 00[fa]fa fa fa fa fa fa fa fa fa fa fa fa 0x0c4a81a07810: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa 0x0c4a81a07820: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa 0x0c4a81a07830: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa 0x0c4a81a07840: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa 0x0c4a81a07850: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa Shadow byte legend (one shadow byte represents 8 application bytes): Addressable: 00 Partially addressable: 01 02 03 04 05 06 07 Heap left redzone: fa Freed heap region: fd Stack left redzone: f1 Stack mid redzone: f2 Stack right redzone: f3 Stack after return: f5 Stack use after scope: f8 Global redzone: f9 Global init order: f6 Poisoned by user: f7 Container overflow: fc Array cookie: ac Intra object redzone: bb ASan internal: fe Left alloca redzone: ca Right alloca redzone: cb ==36217==ABORTING * checking package vignettes in ‘inst/doc’ ... OK * checking re-building of vignette outputs ... [460s/466s] OK * DONE Status: 1 ERROR