* using log directory ‘/data/gannet/ripley/R/packages/tests-clang-SAN/Meiosis.Rcheck’ * using R Under development (unstable) (2018-02-09 r74240) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘Meiosis/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘Meiosis’ version ‘1.0.2’ * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package ‘Meiosis’ can be installed ... [115s/81s] OK * checking package directory ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking contents of ‘data’ directory ... OK * checking compiled code ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking tests ... OK Running ‘testthat.R’ * checking package vignettes in ‘inst/doc’ ... OK * checking re-building of vignette outputs ... [15s/16s] WARNING Error in re-building vignettes: ... ================================================================= ==35409==ERROR: AddressSanitizer: heap-buffer-overflow on address 0x625008031018 at pc 0x7f9cfd72d128 bp 0x7ffef9af08a0 sp 0x7ffef9af0898 READ of size 8 at 0x625008031018 thread T0 #0 0x7f9cfd72d127 in double realized_ibd_ns::realized_ibd, Rcpp::Vector<14, Rcpp::PreserveStorage> >(Rcpp::Vector<13, Rcpp::PreserveStorage> const&, Rcpp::Vector<14, Rcpp::PreserveStorage> const&, Rcpp::Vector<13, Rcpp::PreserveStorage> const&, Rcpp::Vector<14, Rcpp::PreserveStorage> const&) /data/gannet/ripley/R/packages/tests-clang-SAN/Meiosis/src/../inst/include/hinterface/realized_ibd.hpp:34:34 #1 0x7f9cfd722b23 in realized_coancestry(Rcpp::Vector<19, Rcpp::PreserveStorage> const&, Rcpp::Nullable > const&) /data/gannet/ripley/R/packages/tests-clang-SAN/Meiosis/src/R_interface.cpp:304:13 #2 0x7f9cfd75504a in Meiosis_realized_coancestry /data/gannet/ripley/R/packages/tests-clang-SAN/Meiosis/src/RcppExports.cpp:204:34 #3 0x7e3b4e in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:573:17 #4 0x85bf9d in do_dotcall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:1252:11 #5 0x9c66b6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6766:14 #6 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #7 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #8 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #9 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #10 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #11 0x9b2184 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:747:12 #12 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #13 0xa266d1 in R_forceAndCall /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1827:8 #14 0x587ba0 in do_lapply /data/gannet/ripley/R/svn/R-devel/src/main/apply.c:70:8 #15 0xb930a9 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1370:11 #16 0x9c305c in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6786:15 #17 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #18 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #19 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #20 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #21 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #22 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #23 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #24 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #25 0x9b2184 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:747:12 #26 0xa1d6da in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #27 0xa64cc2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4966:15 #28 0xa6510b in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5008:10 #29 0x9de747 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6503:20 #30 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #31 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #32 0x9b2184 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:747:12 #33 0xa1dfdf in Rf_evalList /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2873:12 #34 0x9b1973 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:718:6 #35 0xa338dc in do_set /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2774:8 #36 0x9b1bbd in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:699:12 #37 0xa3d24c in do_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3153:13 #38 0x9c66b6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6766:14 #39 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #40 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #41 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #42 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #43 0xa1d6da in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #44 0x9b22d6 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:647:9 #45 0xa3f7a8 in do_withVisible /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:3206:9 #46 0xb930a9 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1370:11 #47 0x9c305c in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6786:15 #48 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #49 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #50 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #51 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #52 0xa1d6da in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #53 0xa64cc2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4966:15 #54 0xa6510b in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5008:10 #55 0x9de747 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6503:20 #56 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #57 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #58 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #59 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #60 0xa1d6da in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #61 0xa64cc2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4966:15 #62 0xa6510b in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5008:10 #63 0x9de747 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6503:20 #64 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #65 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #66 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #67 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #68 0xa1d6da in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #69 0xa64cc2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4966:15 #70 0xa6510b in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5008:10 #71 0x9de747 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6503:20 #72 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #73 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #74 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #75 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #76 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #77 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #78 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #79 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #80 0x9b2184 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:747:12 #81 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #82 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #83 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #84 0xa1d6da in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #85 0xa64cc2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4966:15 #86 0xa6510b in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5008:10 #87 0x9de747 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6503:20 #88 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #89 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #90 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #91 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #92 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #93 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #94 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #95 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #96 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #97 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #98 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #99 0xb9d32a in dispatchMethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:419:16 #100 0xb9bcad in Rf_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:459:10 #101 0xb9e690 in do_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:535:9 #102 0x9c305c in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6786:15 #103 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #104 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #105 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #106 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #107 0xa1d6da in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #108 0xa64cc2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4966:15 #109 0xa6510b in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5008:10 #110 0x9de747 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6503:20 #111 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #112 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #113 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #114 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #115 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #116 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #117 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #118 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #119 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #120 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #121 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #122 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #123 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #124 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #125 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #126 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #127 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #128 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #129 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #130 0xa1d6da in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #131 0xa64cc2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4966:15 #132 0xa6510b in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5008:10 #133 0x9de747 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6503:20 #134 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #135 0xa1d6da in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #136 0xa64cc2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4966:15 #137 0xa6510b in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5008:10 #138 0x9de747 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6503:20 #139 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #140 0xa1d6da in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #141 0xa64cc2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4966:15 #142 0xa6510b in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5008:10 #143 0x9de747 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6503:20 #144 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #145 0xa1d6da in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:520:8 #146 0xa64cc2 in FORCE_PROMISE /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:4966:15 #147 0xa6510b in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5008:10 #148 0x9de747 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6503:20 #149 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #150 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #151 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #152 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #153 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #154 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #155 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #156 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #157 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #158 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #159 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #160 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #161 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #162 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #163 0x9b2184 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:747:12 #164 0xb1e343 in Rf_ReplIteration /data/gannet/ripley/R/svn/R-devel/src/main/main.c:258:2 #165 0xb232c0 in R_ReplConsole /data/gannet/ripley/R/svn/R-devel/src/main/main.c:308:11 #166 0xb230a5 in run_Rmainloop /data/gannet/ripley/R/svn/R-devel/src/main/main.c:1082:5 #167 0x52a08a in main /data/gannet/ripley/R/svn/R-devel/src/main/Rmain.c:29:5 #168 0x7f9d11137889 in __libc_start_main (/lib64/libc.so.6+0x20889) #169 0x42d829 in _start (/data/gannet/ripley/R/R-clang-SAN/bin/exec/R+0x42d829) 0x625008031018 is located 0 bytes to the right of 7960-byte region [0x62500802f100,0x625008031018) allocated by thread T0 here: #0 0x4ed6d0 in __interceptor_malloc /data/gannet/ripley/Sources/LLVM/6.0.x/trunk/projects/compiler-rt/lib/asan/asan_malloc_linux.cc:88 #1 0xb3ed38 in GetNewPage /data/gannet/ripley/R/svn/R-devel/src/main/memory.c:888:12 #2 0xb46510 in Rf_allocVector3 /data/gannet/ripley/R/svn/R-devel/src/main/memory.c:2536:6 #3 0x606b3f in Rf_allocVector /data/gannet/ripley/R/svn/R-devel/src/include/Rinlinedfuns.h:566:12 #4 0x606b3f in Rf_ScalarInteger /data/gannet/ripley/R/svn/R-devel/src/include/Rinlinedfuns.h:973 #5 0x606b3f in do_length /data/gannet/ripley/R/svn/R-devel/src/main/array.c:455 #6 0x9c66b6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6766:14 #7 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #8 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #9 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #10 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #11 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #12 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #13 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #14 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #15 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #16 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #17 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #18 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #19 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #20 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #21 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #22 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #23 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #24 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #25 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #26 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #27 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #28 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 #29 0xa2493b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c #30 0x9d5e38 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:6734:12 #31 0x9b0fad in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:624:8 SUMMARY: AddressSanitizer: heap-buffer-overflow /data/gannet/ripley/R/packages/tests-clang-SAN/Meiosis/src/../inst/include/hinterface/realized_ibd.hpp:34:34 in double realized_ibd_ns::realized_ibd, Rcpp::Vector<14, Rcpp::PreserveStorage> >(Rcpp::Vector<13, Rcpp::PreserveStorage> const&, Rcpp::Vector<14, Rcpp::PreserveStorage> const&, Rcpp::Vector<13, Rcpp::PreserveStorage> const&, Rcpp::Vector<14, Rcpp::PreserveStorage> const&) Shadow bytes around the buggy address: 0x0c4a80ffe1b0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 0x0c4a80ffe1c0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 0x0c4a80ffe1d0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 0x0c4a80ffe1e0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 0x0c4a80ffe1f0: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 =>0x0c4a80ffe200: 00 00 00[fa]fa fa fa fa fa fa fa fa fa fa fa fa 0x0c4a80ffe210: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa 0x0c4a80ffe220: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa 0x0c4a80ffe230: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa 0x0c4a80ffe240: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa 0x0c4a80ffe250: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa Shadow byte legend (one shadow byte represents 8 application bytes): Addressable: 00 Partially addressable: 01 02 03 04 05 06 07 Heap left redzone: fa Freed heap region: fd Stack left redzone: f1 Stack mid redzone: f2 Stack right redzone: f3 Stack after return: f5 Stack use after scope: f8 Global redzone: f9 Global init order: f6 Poisoned by user: f7 Container overflow: fc Array cookie: ac Intra object redzone: bb ASan internal: fe Left alloca redzone: ca Right alloca redzone: cb ==35409==ABORTING * DONE Status: 1 WARNING