* using log directory ‘/data/gannet/ripley/R/packages/tests-clang-ASAN/GSNA.Rcheck’ * using R Under development (unstable) (2024-03-18 r86148) * using platform: x86_64-pc-linux-gnu * R was compiled by clang version 18.1.1 flang-new version 18.1.1 * running under: Fedora Linux 36 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘GSNA/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘GSNA’ version ‘0.1.4.2’ * package encoding: UTF-8 * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package ‘GSNA’ can be installed ... [119s/114s] OK * used C++ compiler: ‘clang version 18.1.1’ * checking package directory ... OK * checking whether the package can be loaded ... [16s/16s] OK * checking whether the package can be loaded with stated dependencies ... [14s/14s] OK * checking whether the package can be unloaded cleanly ... [14s/15s] OK * checking whether the namespace can be loaded with stated dependencies ... [13s/13s] OK * checking whether the namespace can be unloaded cleanly ... [16s/16s] OK * checking loading without being on the library search path ... [16s/16s] OK * checking compiled code ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [56s/58s] OK * checking tests ... [26s/28s] ERROR Running ‘testthat.R’ [24s/26s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(GSNA) Loading GSNA.... For a vignette, run: vignette( "using_the_gsna_package" ) > > test_check("GSNA") Using DAVID import. Using GSN-ORA import. ================================================================= ==1880917==ERROR: AddressSanitizer: container-overflow on address 0x5150000a1ea0 at pc 0x5556bcac42aa bp 0x7ffc18b6c830 sp 0x7ffc18b6bff8 WRITE of size 480 at 0x5150000a1ea0 thread T0 #0 0x5556bcac42a9 in memset /data/gannet/ripley/Sources2/LLVM/18/llvm-project-18.1.0.src/compiler-rt/lib/asan/../sanitizer_common/sanitizer_common_interceptors_memintrinsics.inc:87:3 #1 0x7fd0c0d37293 in std::__1::vector >::__append(unsigned long) (/data/gannet/ripley/R/test-clang/ragg/libs/ragg.so+0x137293) #2 0x7fd0c0d7be9d in void TextRenderer, agg::order_rgba>, agg::row_accessor > >::plot_text, agg::order_rgba>, agg::row_accessor >, agg::renderer_scanline_aa_solid, agg::order_rgb>, agg::row_accessor, 3u, 0u> > >, agg::renderer_base, agg::order_rgb>, agg::row_accessor, 3u, 0u> >, agg::rasterizer_scanline_aa >, agg::scanline_u8>(double, double, char const*, double, double, agg::renderer_scanline_aa_solid, agg::order_rgb>, agg::row_accessor, 3u, 0u> > >&, agg::renderer_base, agg::order_rgb>, agg::row_accessor, 3u, 0u> >&, agg::scanline_u8&, unsigned int, agg::rasterizer_scanline_aa >&, bool, agg::path_base >*) (/data/gannet/ripley/R/test-clang/ragg/libs/ragg.so+0x17be9d) #3 0x7fd0c0d7b393 in AggDevice, agg::order_rgb>, agg::row_accessor, 3u, 0u>, agg::rgba8T, agg::pixfmt_alpha_blend_rgba, agg::order_rgba>, agg::row_accessor > >::drawText(double, double, char const*, char const*, int, double, double, double, int) (/data/gannet/ripley/R/test-clang/ragg/libs/ragg.so+0x17b393) #4 0x7fd0c0d98b5c in void agg_text, agg::order_rgb>, agg::row_accessor, 3u, 0u> > >(double, double, char const*, double, double, R_GE_gcontext*, _DevDesc*) (/data/gannet/ripley/R/test-clang/ragg/libs/ragg.so+0x198b5c) #5 0x5556bccc297f in clipText /data/gannet/ripley/R/svn/R-devel/src/main/engine.c #6 0x5556bccc297f in GEText /data/gannet/ripley/R/svn/R-devel/src/main/engine.c:2013:7 #7 0x7fd0c588a7c7 in gridText /data/gannet/ripley/R/svn/R-devel/src/library/grid/src/grid.c:3767:4 #8 0x7fd0c5889690 in L_text /data/gannet/ripley/R/svn/R-devel/src/library/grid/src/grid.c:3866:5 #9 0x5556bcc779ce in R_doDotCall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c #10 0x5556bcc8037e in do_dotcall /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:1437:11 #11 0x5556bcc81083 in do_dotcallgr /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:1542:5 #12 0x5556bcd3aa4c in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7710:12 #13 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #14 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #15 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #16 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #17 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #18 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #19 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #20 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #21 0x5556bcd71fb8 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #22 0x5556bce46df7 in dispatchMethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:472:16 #23 0x5556bce45974 in Rf_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:512:10 #24 0x5556bce4803f in do_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:578:9 #25 0x5556bcd1dcdb in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7770:15 #26 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #27 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #28 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #29 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #30 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #31 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #32 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #33 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #34 0x5556bcd1a4ce in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #35 0x5556bcd1a4ce in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1277:12 #36 0x5556bccd127a in do_recordGraphics /data/gannet/ripley/R/svn/R-devel/src/main/engine.c:3256:5 #37 0x5556bcd33857 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7750:14 #38 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #39 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #40 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #41 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #42 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #43 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #44 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #45 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #46 0x5556bcd71fb8 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #47 0x5556bce46df7 in dispatchMethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:472:16 #48 0x5556bce45908 in Rf_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:508:10 #49 0x5556bce4803f in do_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:578:9 #50 0x5556bcd1dcdb in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7770:15 #51 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #52 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #53 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #54 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #55 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #56 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #57 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #58 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #59 0x5556bcd1a4ce in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #60 0x5556bcd1a4ce in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1277:12 #61 0x5556bccd127a in do_recordGraphics /data/gannet/ripley/R/svn/R-devel/src/main/engine.c:3256:5 #62 0x5556bcd33857 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7750:14 #63 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #64 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #65 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #66 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #67 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #68 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #69 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #70 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #71 0x5556bcd71fb8 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #72 0x5556bce46df7 in dispatchMethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:472:16 #73 0x5556bce45908 in Rf_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:508:10 #74 0x5556bce4803f in do_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:578:9 #75 0x5556bcd1dcdb in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7770:15 #76 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #77 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #78 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #79 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #80 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #81 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #82 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #83 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #84 0x5556bcd1a4ce in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #85 0x5556bcd1a4ce in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1277:12 #86 0x5556bccd127a in do_recordGraphics /data/gannet/ripley/R/svn/R-devel/src/main/engine.c:3256:5 #87 0x5556bcd33857 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7750:14 #88 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #89 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #90 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #91 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #92 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #93 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #94 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #95 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #96 0x5556bcd71fb8 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #97 0x5556bce46df7 in dispatchMethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:472:16 #98 0x5556bce45974 in Rf_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:512:10 #99 0x5556bce4803f in do_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:578:9 #100 0x5556bcd1dcdb in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7770:15 #101 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #102 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #103 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #104 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #105 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #106 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #107 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #108 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #109 0x5556bcd1a4ce in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #110 0x5556bcd1a4ce in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1277:12 #111 0x5556bccd127a in do_recordGraphics /data/gannet/ripley/R/svn/R-devel/src/main/engine.c:3256:5 #112 0x5556bcd33857 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7750:14 #113 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #114 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #115 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #116 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #117 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #118 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #119 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #120 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #121 0x5556bcd71fb8 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #122 0x5556bce46df7 in dispatchMethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:472:16 #123 0x5556bce45908 in Rf_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:508:10 #124 0x5556bce4803f in do_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:578:9 #125 0x5556bcd1dcdb in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7770:15 #126 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #127 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #128 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #129 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #130 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #131 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #132 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #133 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #134 0x5556bcd1a4ce in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #135 0x5556bcd1a4ce in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1277:12 #136 0x5556bccd127a in do_recordGraphics /data/gannet/ripley/R/svn/R-devel/src/main/engine.c:3256:5 #137 0x5556bcd33857 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7750:14 #138 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #139 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #140 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #141 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #142 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #143 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #144 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #145 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #146 0x5556bcd71fb8 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #147 0x5556bce4aacd in do_nextmethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:945:11 #148 0x5556bce405f9 in do_internal /data/gannet/ripley/R/svn/R-devel/src/main/names.c:1409:11 #149 0x5556bcd1dcdb in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7770:15 #150 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #151 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #152 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #153 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #154 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #155 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #156 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #157 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #158 0x5556bcd71fb8 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #159 0x5556bce46df7 in dispatchMethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:472:16 #160 0x5556bce45974 in Rf_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:512:10 #161 0x5556bce4803f in do_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:578:9 #162 0x5556bcd1dcdb in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7770:15 #163 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #164 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #165 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #166 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #167 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #168 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #169 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #170 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #171 0x5556bcd1a4ce in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #172 0x5556bcd1a4ce in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1277:12 #173 0x5556bccd127a in do_recordGraphics /data/gannet/ripley/R/svn/R-devel/src/main/engine.c:3256:5 #174 0x5556bcd33857 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7750:14 #175 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #176 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #177 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #178 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #179 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #180 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #181 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #182 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #183 0x5556bcd71fb8 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #184 0x5556bce46df7 in dispatchMethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:472:16 #185 0x5556bce45974 in Rf_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:512:10 #186 0x5556bce4803f in do_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:578:9 #187 0x5556bcd1dcdb in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7770:15 #188 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #189 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #190 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #191 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #192 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #193 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #194 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #195 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #196 0x5556bcd1a4ce in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #197 0x5556bcd1a4ce in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1277:12 #198 0x5556bccd127a in do_recordGraphics /data/gannet/ripley/R/svn/R-devel/src/main/engine.c:3256:5 #199 0x5556bcd33857 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7750:14 #200 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #201 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #202 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #203 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #204 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #205 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #206 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #207 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #208 0x5556bcd71fb8 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #209 0x5556bce46df7 in dispatchMethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:472:16 #210 0x5556bce45908 in Rf_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:508:10 #211 0x5556bce4803f in do_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:578:9 #212 0x5556bcd1dcdb in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7770:15 #213 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #214 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #215 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #216 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #217 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #218 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #219 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #220 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #221 0x5556bcd71fb8 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #222 0x5556bce46df7 in dispatchMethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:472:16 #223 0x5556bce45908 in Rf_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:508:10 #224 0x5556bce4803f in do_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:578:9 #225 0x5556bcd1dcdb in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7770:15 #226 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #227 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #228 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #229 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #230 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #231 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #232 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #233 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #234 0x5556bcd71fb8 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #235 0x5556bce46df7 in dispatchMethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:472:16 #236 0x5556bce45908 in Rf_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:508:10 #237 0x5556bce4803f in do_usemethod /data/gannet/ripley/R/svn/R-devel/src/main/objects.c:578:9 #238 0x5556bcd1dcdb in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7770:15 #239 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #240 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #241 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #242 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #243 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #244 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #245 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #246 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #247 0x5556bcd1a4ce in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #248 0x5556bcd1a4ce in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1277:12 #249 0x5556bcc6bd64 in do_External /data/gannet/ripley/R/svn/R-devel/src/main/dotcode.c:573:11 #250 0x5556bcd33857 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7750:14 #251 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #252 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #253 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #254 0x5556bcd3ac99 in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #255 0x5556bcd3ac99 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7721:12 #256 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #257 0x5556bcd709b1 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:975:13 #258 0x5556bcd3d7c6 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5797:3 #259 0x5556bcd3d7c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7505:20 #260 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #261 0x5556bcd709b1 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:975:13 #262 0x5556bcd19c9d in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1184:6 #263 0x5556bcd709b1 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:975:13 #264 0x5556bcd3d7c6 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5797:3 #265 0x5556bcd3d7c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7505:20 #266 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #267 0x5556bcd83e0b in R_execClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2383:22 #268 0x5556bcd82bc4 in applyClosure_core /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2296:16 #269 0x5556bcd1a4ce in Rf_applyClosure /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:2318:16 #270 0x5556bcd1a4ce in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1277:12 #271 0x5556bcd709b1 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:975:13 #272 0x5556bcd3d7c6 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5797:3 #273 0x5556bcd3d7c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7505:20 #274 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #275 0x5556bcd709b1 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:975:13 #276 0x5556bcd3d7c6 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5797:3 #277 0x5556bcd3d7c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7505:20 #278 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #279 0x5556bcd709b1 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:975:13 #280 0x5556bcd3d7c6 in getvar /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:5797:3 #281 0x5556bcd3d7c6 in bcEval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:7505:20 #282 0x5556bcd19ab1 in Rf_eval /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:1159:8 #283 0x5556bcd709b1 in forcePromise /data/gannet/ripley/R/svn/R-devel/src/main/eval.c:975:13 0x5150000a1ea0 is located 32 bytes inside of 512-byte region [0x5150000a1e80,0x5150000a2080) allocated by thread T0 here: #0 0x5556bcac5aaf in malloc /data/gannet/ripley/Sources2/LLVM/18/llvm-project-18.1.0.src/compiler-rt/lib/asan/asan_malloc_linux.cpp:68:3 #1 0x7fd0d72b4a1b in operator new(unsigned long) /data/gannet/ripley/Sources2/gcc13/build/x86_64-pc-linux-gnu/libstdc++-v3/libsupc++/../../../../latest/libstdc++-v3/libsupc++/new_op.cc:50:22 HINT: if you don't care about these errors you may set ASAN_OPTIONS=detect_container_overflow=0. If you suspect a false positive see also: https://github.com/google/sanitizers/wiki/AddressSanitizerContainerOverflow. SUMMARY: AddressSanitizer: container-overflow (/data/gannet/ripley/R/test-clang/ragg/libs/ragg.so+0x137293) in std::__1::vector >::__append(unsigned long) Shadow bytes around the buggy address: 0x5150000a1c00: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 0x5150000a1c80: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 0x5150000a1d00: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 0x5150000a1d80: 00 00 00 00 00 00 00 00 00 fa fa fa fa fa fa fa 0x5150000a1e00: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa =>0x5150000a1e80: 00 00 00 00[fc]fc fc fc fc fc fc fc fc fc fc fc 0x5150000a1f00: fc fc fc fc fc fc fc fc fc fc fc fc fc fc fc fc 0x5150000a1f80: fc fc fc fc fc fc fc fc fc fc fc fc fc fc fc fc 0x5150000a2000: fc fc fc fc fc fc fc fc fc fc fc fc fc fc fc fc 0x5150000a2080: fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa fa 0x5150000a2100: 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 Shadow byte legend (one shadow byte represents 8 application bytes): Addressable: 00 Partially addressable: 01 02 03 04 05 06 07 Heap left redzone: fa Freed heap region: fd Stack left redzone: f1 Stack mid redzone: f2 Stack right redzone: f3 Stack after return: f5 Stack use after scope: f8 Global redzone: f9 Global init order: f6 Poisoned by user: f7 Container overflow: fc Array cookie: ac Intra object redzone: bb ASan internal: fe Left alloca redzone: ca Right alloca redzone: cb ==1880917==ABORTING * checking package vignettes ... OK * checking re-building of vignette outputs ... [159s/163s] OK * DONE Status: 1 ERROR