* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/tktdjl2r.Rcheck’ * using R Under development (unstable) (2021-06-03 r80449) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * checking for file ‘tktdjl2r/DESCRIPTION’ ... OK * this is package ‘tktdjl2r’ version ‘0.2.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘tktdjl2r’ can be installed ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking examples with --run-donttest ... ERROR Running examples in ‘tktdjl2r-Ex.R’ failed The error most likely occurred in: > ### Name: tktdjl2r_setup > ### Title: Setup tktdjl2 > ### Aliases: tktdjl2r_setup > > ### ** Examples > > > ## No test: > ## tktdjl2r_setup() is time-consuming and requires Julia+TKTDsimulations.jl > > tktdjl2r::tktdjl2r_setup() which: no julia in (/opt/bin:/data/blackswan/ripley/extras/bin:/data/blackswan/ripley/bin:/usr/local/bin:/usr/local/texbin:/usr/sbin:.:/data/blackswan/ripley/bin:/usr/local/bin:/usr/local/texbin:/usr/sbin:/usr/lib64/qt-3.3/bin:/usr/share/Modules/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/usr/lib64/openmpi/bin:/usr/lib64/openmpi/bin) Warning in system2("bash", "-l -c 'which julia'", stdout = TRUE) : running command ''bash' -l -c 'which julia'' had status 1 sh: NA: command not found Error in JuliaCall::julia_setup(...) : Julia is not found. Calls: -> Execution halted * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * checking for new files in some other directories ... OK * DONE Status: 1 ERROR See ‘/data/blackswan/ripley/R/packages/tests-devel/tktdjl2r.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 0:22.14, 18.06 + 3.75