* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/spinebil.Rcheck’ * using R Under development (unstable) (2020-06-12 r78687) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * checking for file ‘spinebil/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘spinebil’ version ‘0.1.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... NOTE Package suggested but not available for checking: ‘mbgraphic’ * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘spinebil’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... OK * checking examples with --run-donttest ... [18s/18s] ERROR Running examples in ‘spinebil-Ex.R’ failed The error most likely occurred in: > ### Name: profileRotation > ### Title: Test rotation invariance of index functions for selected 2-d > ### data set. > ### Aliases: profileRotation > > ### ** Examples > > ## No test: > d <- as.matrix(sinData(2, 1000)) Warning: `mutate_()` is deprecated as of dplyr 0.7.0. Please use `mutate()` instead. See vignette('programming') for more help This warning is displayed once every 8 hours. Call `lifecycle::last_warnings()` to see where this warning was generated. > indexList <- list(tourr::holes(), scagIndex("Skinny"), splineIndex()) > indexLabels <- c("holes", "skinny", "splines2d") > pRot <- profileRotation(d, indexList, indexLabels) Error in loadNamespace(name) : there is no package called ‘mbgraphic’ Calls: profileRotation ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart Execution halted * checking PDF version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 1 NOTE See ‘/data/blackswan/ripley/R/packages/tests-devel/spinebil.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 0:33.67, 30.73 + 2.72