* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/skewlmm.Rcheck’ * using R Under development (unstable) (2026-01-21 r89314) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) * running under: Fedora Linux 40 (Workstation Edition) * using session charset: UTF-8 * checking for file ‘skewlmm/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘skewlmm’ version ‘1.1.3’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘skewlmm’ can be installed ... [24s/24s] OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [57s/57s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [14s/14s] OK * checking examples with --run-donttest ... ERROR Running examples in ‘skewlmm-Ex.R’ failed The error most likely occurred in: > ### Name: acfresid > ### Title: Autocorrelation function for smn.lmm or smsn.lmm residuals > ### Aliases: acfresid > ### Keywords: models > > ### ** Examples > > fm1 = smn.lmm(distance ~ age+Sex, data=nlme::Orthodont, groupVar="Subject") > acf1 = acfresid(fm1) > acf1 lag ACF n.used 1 0 1.00000000 108 2 1 0.02228802 81 3 2 0.11110915 54 4 3 -0.28769779 27 > plot(acf1) > > ## computing simulated bands > ## No test: > acfCI = acfresid(fm1, calcCI=TRUE) Error in `list_flatten()`: ! `x` must be a list, not a list 1D array. Backtrace: ▆ 1. ├─skewlmm::acfresid(fm1, calcCI = TRUE) 2. │ └─... %>% bind_rows() 3. ├─dplyr::bind_rows(.) 4. │ └─dplyr:::list_flatten(dots, fn = is_flattenable) 5. │ └─vctrs::obj_check_list(x) 6. └─vctrs:::stop_non_list_type(x, y, z) 7. └─cli::cli_abort(...) 8. └─rlang::abort(...) Execution halted * checking PDF version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * checking for new files in some other directories ... OK * DONE Status: 1 ERROR See ‘/data/blackswan/ripley/R/packages/tests-devel/skewlmm.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 2:45.97, 139.83 + 25.14