* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/openSTARS.Rcheck’ * using R Under development (unstable) (2023-06-07 r84517) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 11.3.1 20220421 (Red Hat 11.3.1-2) GNU Fortran (GCC) 11.3.1 20220421 (Red Hat 11.3.1-2) * running under: Fedora 34 (Workstation Edition) * using session charset: UTF-8 * checking for file ‘openSTARS/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘openSTARS’ version ‘1.2.3’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘openSTARS’ can be installed ... [11s/11s] OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [18s/18s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking examples with --run-donttest ... ERROR Running examples in ‘openSTARS-Ex.R’ failed The error most likely occurred in: > ### Name: calc_attributes_edges > ### Title: Calculate attributes of the edges. > ### Aliases: calc_attributes_edges > > ### ** Examples > > ## No test: > # Initiate and setup GRASS > dem_path <- system.file("extdata", "nc", "elev_ned_30m.tif", package = "openSTARS") > if(.Platform$OS.type == "windows"){ + grass_program_path = "c:/Program Files/GRASS GIS 7.6" + } else { + grass_program_path = "/usr/lib/grass78/" + } > > setup_grass_environment(dem = dem_path, + gisBase = grass_program_path, + remove_GISRC = TRUE, + override = TRUE + ) Warning: Package rgrass7 transitioning to package rgrass for GRASS 7+. Warning: GDAL support is provided by the sf and terra packages among others Warning: GDAL support is provided by the sf and terra packages among others Warning: Package rgrass7 transitioning to package rgrass for GRASS 7+. Warning: Package rgrass7 transitioning to package rgrass for GRASS 7+. Error in initGRASS(gisBase = gisBase, SG = dem_grid, mapset = "PERMANENT", : /usr/lib/grass78/ not found Calls: setup_grass_environment -> initGRASS Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * checking for new files in some other directories ... OK * DONE Status: 1 ERROR See ‘/data/blackswan/ripley/R/packages/tests-devel/openSTARS.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 1:45.01, 92.60 + 11.68