* using log directory ‘/data/localhost/ripley/R/packages/tests-donttest/netmeta.Rcheck’ * using R Under development (unstable) (2026-08-24 r90445) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 16.1.1 20260515 (Red Hat 16.1.1-2) GNU Fortran (GCC) 16.1.1 20260515 (Red Hat 16.1.1-2) * running under: Fedora Linux 44 (Server Edition) * using session charset: UTF-8 * current time: 2026-08-25 16:52:46 UTC * checking for file ‘netmeta/DESCRIPTION’ ... OK * this is package ‘netmeta’ version ‘3.6-1’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘netmeta’ can be installed ... [27s/30s] OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [63s/70s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [86s/104s] OK * checking examples with --run-donttest ... [158s/176s] ERROR Running examples in ‘netmeta-Ex.R’ failed The error most likely occurred in: > ### Name: netgraph.netmeta > ### Title: Network graph > ### Aliases: netgraph.netmeta > ### Keywords: hplot > > ### ** Examples > > data(smokingcessation) > > # Transform data from arm-based format to contrast-based format > # > pw1 <- pairwise(list(treat1, treat2, treat3), + event = list(event1, event2, event3), n = list(n1, n2, n3), + data = smokingcessation, sm = "OR") > > # Conduct random effects network meta-analysis > # > nma1 <- netmeta(pw1, common = FALSE) > > # Network graph with default settings > # > netgraph(nma1) > > ## No test: > # Generation of an object of class 'netmeta' with reference > # treatment 'plac' > # > pw2 <- pairwise(studlab = study, treat = treatment, + n = n, mean = mean, sd = sd, data = Senn2013, + varnames = c("MD", "seMD")) > nma2 <- netmeta(pw2, reference = "plac") > > # Network graph with default settings > # > netgraph(nma2) > > # Network graph with specified order of the treatments and one > # highlighted comparison > # > trts <- c("plac", "benf", "migl", "acar", "sulf", + "metf", "rosi", "piog", "sita", "vild") > netgraph(nma2, highlight = "rosi:plac", seq = trts) > > # Same network graph using argument 'seq' in netmeta function > # > nma3 <- netmeta(pw2, reference = "plac", seq = trts) > netgraph(nma3, highlight = "rosi:plac") > > # Network graph optimized, starting from a circle, with multi-arm > # study colored > # > netgraph(nma2, start = "circle", iterate = TRUE, + multiarm = TRUE, col.multiarm = "purple") > > # Network graph optimized, starting from a circle, with multi-arm > # study colored and all intermediate iteration steps visible > # > netgraph(nma2, start = "circle", iterate = TRUE, + multiarm = TRUE, col.multiarm = "purple", + allfigures = TRUE) > > # Network graph optimized, starting from Laplacian eigenvectors, > # with multi-arm study colored > # > netgraph(nma2, start = "eigen", + multiarm = TRUE, col.multiarm = "purple") > > # Network graph optimized, starting from different Laplacian > # eigenvectors, with multi-arm study colored > # > netgraph(nma2, start = "prcomp", + multiarm = TRUE, col.multiarm = "purple") > > # Network graph optimized, starting from random initial layout, > # with multi-arm study colored > # > netgraph(nma2, start = "random", + multiarm = TRUE, col.multiarm = "purple") > > # Network graph without plastic look and one highlighted comparison > # > netgraph(nma2, plastic = FALSE, highlight = "rosi:plac") > > # Network graph with same thickness for all comparisons > # > netgraph(nma2, thickness = "equal") > > # Network graph with changed labels and specified order of the > # treatments > # > netgraph(nma2, seq = c(1, 3, 5, 2, 9, 4, 7, 6, 8, 10), + labels = LETTERS[1:10]) > > # Rotate treatment labels (orthogonal to circle) > # > netgraph(nma2, srt.labels = "o") > > # Network graph in 3-D (opens a new device, where you may rotate and > # zoom the plot using the mouse / the mouse wheel). > # The rgl package must be installed for 3-D plots. > # > if (requireNamespace("rgl", quietly = TRUE)) + netgraph(nma2, dim = "3d") Error in open3d() : OpenGL is not available in this build Calls: netgraph ... -> plot3d.default -> next3d -> .check3d -> open3d Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... [12s/14s] OK * checking HTML version of manual ... [9s/10s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * checking for new files in some other directories ... NOTE Found the following files/directories: ‘~/.cache/R/gh/020f4e9718648abe7ddf2adeb010ab3d.rds’ ‘~/.cache/R/gh/1715fe178f72098bf2640f98671ba81b.rds’ ‘~/.cache/R/gh/19250be146bbf7ea804233757d24b836.rds’ ‘~/.cache/R/gh/242384870a914daaf6c5a8aa2874ec80.rds’ ‘~/.cache/R/gh/26ef4c7f72a20f2c832c2f2006cb5520.rds’ ‘~/.cache/R/gh/2fe66575cff4603f230536d61854d390.rds’ ‘~/.cache/R/gh/53babfc44ffb3775440e826978b48fe4.rds’ ‘~/.cache/R/gh/5503ca9cd516cea3680a7b27d4df683b.rds’ ‘~/.cache/R/gh/55f53b89e663a32205b6d042b781a3db.rds’ ‘~/.cache/R/gh/5c2b921352f9a74703d46729305be5aa.rds’ ‘~/.cache/R/gh/5d14bccf271998a2da1e0a5fa4051427.rds’ ‘~/.cache/R/gh/6fef68bfed0f94abb58c395885ea08b9.rds’ ‘~/.cache/R/gh/74293890cfa2b4453cbf82299e5a691f.rds’ ‘~/.cache/R/gh/74ae31ed473e0be90ff2e6fcca0f15c8.rds’ ‘~/.cache/R/gh/7a2c81f19dbbbf928cf8d93256111a1e.rds’ ‘~/.cache/R/gh/8471eb0f94aa5b5c55c7a7e203820b4d.rds’ ‘~/.cache/R/gh/89dc566af4334cc2637d7029dc53b510.rds’ ‘~/.cache/R/gh/95d0b575ebdbcfd39c36cce447d0d15e.rds’ ‘~/.cache/R/gh/97d69c1bacc245b2e69ba1ed544049c3.rds’ ‘~/.cache/R/gh/9f11d31ff0c4cff8d71db24ab7c01701.rds’ ‘~/.cache/R/gh/9fc2b0ff60212a258daffafc85e9a5b9.rds’ ‘~/.cache/R/gh/a83600e89fff597770664f76e4c0a4f2.rds’ ‘~/.cache/R/gh/a8fec53b661184524b7415b95b386e66.rds’ ‘~/.cache/R/gh/a955c6a1d9fb737c774a6a2992bfbb64.rds’ ‘~/.cache/R/gh/be4ccb5749dfc83fbde4352544943dab.rds’ ‘~/.cache/R/gh/bedfe5163974adaa5eecdf1467db0309.rds’ ‘~/.cache/R/gh/c1ebb1fdf686f1e37206b9586bbd7528.rds’ ‘~/.cache/R/gh/ca1ead57552b41590960e231ec399a02.rds’ ‘~/.cache/R/gh/e1c91c6f13cbf9684dd243d4ac059a77.rds’ ‘~/.cache/R/gh/f36f9a334e3836712d5c913a7b8e8f82.rds’ * DONE Status: 1 ERROR, 1 NOTE See ‘/data/localhost/ripley/R/packages/tests-donttest/netmeta.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 9:12.12, 443.46 + 38.12