* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/mixbox.Rcheck’ * using R Under development (unstable) (2025-11-17 r89032) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) * running under: Fedora Linux 40 (Workstation Edition) * using session charset: UTF-8 * checking for file ‘mixbox/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘mixbox’ version ‘1.2.3’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘mixbox’ can be installed ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [21s/22s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... OK * checking examples with --run-donttest ... ERROR Running examples in ‘mixbox-Ex.R’ failed The error most likely occurred in: > ### Name: configuration1 > ### Title: Output configuration. > ### Aliases: configuration1 > ### Keywords: internal > > ### ** Examples > > ## No test: > n <- 200 > G <- 2 > weight <- rep( 0.5, 2 ) > mu1 <- rep(-5 , 2 ) > mu2 <- rep( 5 , 2 ) > sigma1 <- matrix( c( 0.4, -0.20, -0.20, 0.5 ), nrow = 2, ncol = 2 ) > sigma2 <- matrix( c( 0.5, 0.20, 0.20, 0.4 ), nrow = 2, ncol = 2 ) > lambda1 <- c(-5, -5 ) > lambda2 <- c( 5, 5 ) > theta1 <- c( 10, 12 ) > theta2 <- c( 10, 20 ) > mu <- list(mu1, mu2) > sigma <- list( sigma1 , sigma2 ) > lambda <- list( lambda1, lambda2) > theta <- list( theta1 , theta2 ) > param <- c("a","b") > PDF <- quote( (b/2)^(a/2)*x^(-a/2 - 1)/gamma(a/2)*exp( -b/(x*2) ) ) > tick <- c(1, 1) > Y <- rmix(n, G, weight, model = "restricted", mu, sigma, lambda, family = "igamma", theta) > ofim <- ofim1(Y[, 1:2], G, weight, mu, sigma, lambda, family = "igamma", + skewness = "TRUE", param, theta, tick, h = 0.001, N = 3000, level = 0.05, PDF) Error in pdf2(W[index, g], i) : object 'x' not found Calls: ofim1 -> estep1 -> mean -> pdf2 Execution halted * checking PDF version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * checking for new files in some other directories ... OK * DONE Status: 1 ERROR See ‘/data/blackswan/ripley/R/packages/tests-devel/mixbox.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 1:19.18, 56.58 + 17.69