* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/misspi.Rcheck’
* using R Under development (unstable) (2025-12-20 r89211)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
    GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
* running under: Fedora Linux 40 (Workstation Edition)
* using session charset: UTF-8
* checking for file ‘misspi/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘misspi’ version ‘0.1.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘misspi’ can be installed ... [17s/18s] OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [22s/22s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking examples with --run-donttest ... ERROR
Running examples in ‘misspi-Ex.R’ failed
The error most likely occurred in:

> ### Name: evaliq
> ### Title: Evaluate the Imputation Quality
> ### Aliases: evaliq
> 
> ### ** Examples
> 
> # A very quick example
> n <- 100
> x.true <- rnorm(n)
> x.est <- x.true
> na.idx <- sample(1:n, 20)
> x.est[na.idx] <- x.est[na.idx] + rnorm(length(na.idx), sd = 0.1)
> 
> # Default plot
> er.eval <- evaliq(x.true[na.idx], x.est[na.idx])
`geom_smooth()` using formula = 'y ~ x'
> 
> # Interactive plot
> er.eval <- evaliq(x.true[na.idx], x.est[na.idx], interactive = TRUE)
`geom_smooth()` using formula = 'y ~ x'
> 
> # Turn off plot
> # All of the three case will return the value of error
> er.eval <- evaliq(x.true[na.idx], x.est[na.idx], plot = FALSE)
> er.eval
$rmse
[1] 0.04971009

$mae
[1] 0.0393759

$nrmse
[1] 0.05684343

> 
> 
> ## No test: 
> # Real data example
> set.seed(0)
> data(toxicity, package = "misspi")
> toxicity.miss <- missar(toxicity, 0.4, 0.2)
> impute.res <- misspi(toxicity.miss)
We highly recommend activate viselect since your data is in high dimension. This may highly improve the speed and imputation accuracy ...

Error in .check_ncores(length(names)) : 32 simultaneous processes spawned
Calls: misspi -> makeCluster -> makePSOCKcluster -> .check_ncores
Execution halted
* checking PDF version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* checking for new files in some other directories ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/blackswan/ripley/R/packages/tests-devel/misspi.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 2:48.76, 130.96 + 28.22