* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/heterogen.Rcheck’
* using R Under development (unstable) (2025-12-20 r89211)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
    GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
* running under: Fedora Linux 40 (Workstation Edition)
* using session charset: UTF-8
* checking for file ‘heterogen/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘heterogen’ version ‘1.2.33’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘heterogen’ can be installed ... [112s/168s] OK
* used C++ compiler: ‘g++ (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [11s/22s] OK
* checking whether the package can be loaded with stated dependencies ... [10s/14s] OK
* checking whether the package can be unloaded cleanly ... [10s/15s] OK
* checking whether the namespace can be loaded with stated dependencies ... [11s/22s] OK
* checking whether the namespace can be unloaded cleanly ... [11s/19s] OK
* checking loading without being on the library search path ... [10s/15s] OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [43s/66s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... [11s/20s] OK
* checking examples with --run-donttest ... [12s/19s] ERROR
Running examples in ‘heterogen-Ex.R’ failed
The error most likely occurred in:

> ### Name: gwpca_df_mc
> ### Title: Perform GWPCA from data.frame with spatial structure.
> ### Aliases: gwpca_df_mc
> 
> ### ** Examples
> 
> ## No test: 
> path_csv <- system.file("extdata","south.csv", package="heterogen")
> south_csv <- rio::import(path_csv)
> 
> # notice: south_csv object contains x,y (lot/lat coordinates)
> # and environmental variables
> north_het <- gwpca_df_mc(as.matrix(south_csv), parallel = TRUE, 
+ ncores = 2, bandwidth = 0.1, tolerance = 10)
Boosting... 

Spatial setting: 
  based on bandwidth 0.1
Error in gwpca_df_mc(as.matrix(south_csv), parallel = TRUE, ncores = 2,  : 
  object 'tmp_zs' not found
Calls: gwpca_df_mc -> do.call
Execution halted
* checking PDF version of manual ... [6s/10s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* checking for new files in some other directories ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/blackswan/ripley/R/packages/tests-devel/heterogen.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 10:33.03, 346.16 + 35.69