* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/gmgm.Rcheck’
* using R Under development (unstable) (2025-11-17 r89032)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
    GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)
* running under: Fedora Linux 40 (Workstation Edition)
* using session charset: UTF-8
* checking for file ‘gmgm/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘gmgm’ version ‘1.1.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘gmgm’ can be installed ... [16s/17s] OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [29s/30s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [21s/21s] OK
* checking examples with --run-donttest ... [30m/32m] ERROR
Running examples in ‘gmgm-Ex.R’ failed
The error most likely occurred in:

> ### Name: smoothing
> ### Title: Perform smoothing inference in a Gaussian mixture dynamic
> ###   Bayesian network
> ### Aliases: smoothing
> 
> ### ** Examples
> 
> ## No test: 
> set.seed(0)
> data(gmdbn_air, data_air)
> evid <- data_air
> evid$NO2[sample.int(7680, 1536)] <- NA
> evid$O3[sample.int(7680, 1536)] <- NA
> evid$TEMP[sample.int(7680, 1536)] <- NA
> evid$WIND[sample.int(7680, 1536)] <- NA
> smooth <- smoothing(gmdbn_air, evid, col_seq = "DATE", verbose = TRUE)

subset 1 / 1
------------
time 1 / 24
time 2 / 24
time 3 / 24
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’ [142s/167s]
 [143s/168s] OK
* checking PDF version of manual ... [11s/20s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* checking for new files in some other directories ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/blackswan/ripley/R/packages/tests-devel/gmgm.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 37:07.22, 2046.12 + 37.54