* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/fkbma.Rcheck’ * using R Under development (unstable) (2025-11-17 r89032) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) * running under: Fedora Linux 40 (Workstation Edition) * using session charset: UTF-8 * checking for file ‘fkbma/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘fkbma’ version ‘0.2.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘fkbma’ can be installed ... [20s/19s] OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [33s/32s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... OK * checking examples with --run-donttest ... [30m/31m] ERROR Running examples in ‘fkbma-Ex.R’ failed The error most likely occurred in: > ### Name: fittedExposureEff > ### Title: Fitted exposure effect values from Reversible Jump MCMC (rjMCMC) > ### Model Results > ### Aliases: fittedExposureEff > > ### ** Examples > > ## No test: > # Example dataset > data("simulated_data") > > candsplinevars <- c("X_1") > candbinaryvars <- paste0("Z_", 1:5) > candinter <- c(candsplinevars, candbinaryvars) > results <- rjMCMC(simulated_data, candsplinevars, candbinaryvars, candinter, + outcome = "Y", factor_var = "trt") Chain 1: | | | 0% | | | 1% | |= | 1% | |= | 2% | |= | 3% | |== | 3% | |== | 4% | |== | 5% | |=== | 5% | |=== | 6% | |=== | 7% | |==== | 7% | |==== | 8% | |==== | 9% | |===== | 9% | |===== | 10% | |===== | 11% | |====== | 11% | |====== | 12% | |====== | 13% | |======= | 13% | |======= | 14% | |======= | 15% | |======== | 15% | |======== | 16% | |======== | 17% | |========= | 17% | |========= | 18% | |========= | 19% | |========== 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OK * checking tests ... Running ‘testthat.R’ [50s/50s] [50s/50s] OK * checking PDF version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * checking for new files in some other directories ... OK * DONE Status: 1 ERROR See ‘/data/blackswan/ripley/R/packages/tests-devel/fkbma.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 34:18.69, 1989.43 + 35.31