* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/dfcomb.Rcheck’
* using R Under development (unstable) (2023-01-07 r83578)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
    gcc (GCC) 11.3.1 20220421 (Red Hat 11.3.1-2)
    GNU Fortran (GCC) 11.3.1 20220421 (Red Hat 11.3.1-2)
* running under: Fedora 34 (Workstation Edition)
* using session charset: UTF-8
* checking for file ‘dfcomb/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘dfcomb’ version ‘3.1-1’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘dfcomb’ can be installed ... [10s/10s] OK
* used C compiler: ‘gcc (GCC) 11.3.1 20220421 (Red Hat 11.3.1-2)’
* used C++ compiler: ‘g++ (GCC) 11.3.1 20220421 (Red Hat 11.3.1-2)’
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... OK
* checking examples with --run-donttest ... [30m/30m] ERROR
Running examples in ‘dfcomb-Ex.R’ failed
The error most likely occurred in:

> ### Name: CombIncrease_sim
> ### Title: Combination design Simulator using Logistic model
> ### Aliases: CombIncrease_sim print.CombIncrease_sim
> 
> ### ** Examples
> 
> ## No test: 
> p_tox_sc1 = matrix(c(0.05,0.10,0.15,0.30,0.45,
+                      0.10,0.15,0.30,0.45,0.55,
+                      0.15,0.30,0.45,0.50,0.60),nrow=5,ncol=3)
> prior_a1 = c(0.12, 0.2, 0.3, 0.4, 0.5)
> prior_a2 = c(0.2, 0.3, 0.4)
> 
> sim1 = CombIncrease_sim(ndose_a1=5, ndose_a2=3, p_tox=p_tox_sc1, target=0.30,
+   target_min=0.20, target_max=0.40, prior_tox_a1=prior_a1,
+   prior_tox_a2=prior_a2, n_cohort=20, cohort=3, tite=FALSE, nsim=2000,
+   c_over=1, cmin_overunder=3, cmin_recom=1, startup=1, alloc_rule=1,
+   early_stop=1, seed=14061991)
0%   10   20   30   40   50   60   70   80   90   100%
[----|----|----|----|----|----|----|----|----|----|
*****************
* checking PDF version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* checking for new files in some other directories ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/blackswan/ripley/R/packages/tests-devel/dfcomb.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 30:34.17, 1821.67 + 5.17