* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/covid19jp.Rcheck’ * using R Under development (unstable) (2021-07-25 r80663) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * checking for file ‘covid19jp/DESCRIPTION’ ... OK * this is package ‘covid19jp’ version ‘0.1.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘covid19jp’ can be installed ... OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... NOTE Note: found 15134 marked UTF-8 strings * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... OK * checking examples with --run-donttest ... [9s/10s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ ERROR Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(covid19jp) > > test_check("covid19jp") ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure (test-data.R:53:3): testing pref_daily ────────────────────────────── Failure to validate that column schemas match. The `expect_col_schema_match()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) ── Failure (test-data.R:90:3): testing pref_weekly ───────────────────────────── Failure to validate that column schemas match. The `expect_col_schema_match()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) ── Failure (test-data.R:91:3): testing pref_weekly ───────────────────────────── Exceedance of failed test units where values in `prefJP` should have been in the set of `c("北海道", "青森県", "岩手県", "宮城県", "秋田県", "山形県", "福島県", "茨城県", "栃木県", "群馬県", "埼玉県", "千葉県", "東京都", "神奈川県", "新潟県", "富山県", "石川県", "福井県", "山梨県", "長野県", "岐阜県", "静岡県", "愛知県", "三重県", "滋賀県", "京都府", "大阪府", "兵庫県", "奈良県", "和歌山県", "鳥取県", "島根県", "岡山県", "広島県", "山口県", "徳島県", "香川県", "愛媛県", "高知県", "福岡県", "佐賀県", "長崎県", "熊本県", "大分県", "宮崎県", "鹿児島県", "沖縄県")`. The `expect_col_vals_in_set()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) ── Failure (test-data.R:93:3): testing pref_weekly ───────────────────────────── Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (330) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (330) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (330) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) Exceedance of failed test units where values in `activeCases` should have been >= `0`, `0`, `0` (and 19 more). The `expect_col_vals_gte()` validation failed beyond the absolute threshold level (1). * failure level (1) >= failure threshold (1) [ FAIL 4 | WARN 0 | SKIP 0 | PASS 16 ] Error: Test failures Execution halted * checking PDF version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * checking for new files in some other directories ... OK * DONE Status: 1 ERROR, 1 NOTE See ‘/data/blackswan/ripley/R/packages/tests-devel/covid19jp.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 0:30.25, 24.32 + 4.17