* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/corregp.Rcheck’ * using R Under development (unstable) (2024-02-02 r85855) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 13.2.1 20231011 (Red Hat 13.2.1-4) GNU Fortran (GCC) 13.2.1 20231011 (Red Hat 13.2.1-4) * running under: Fedora Linux 38 (Workstation Edition) * using session charset: UTF-8 * checking for file ‘corregp/DESCRIPTION’ ... OK * this is package ‘corregp’ version ‘2.0.2’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘corregp’ can be installed ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... NOTE Note: found 2 marked Latin-1 strings * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking examples with --run-donttest ... ERROR Running examples in ‘corregp-Ex.R’ failed The error most likely occurred in: > ### Name: AVT > ### Title: The Use of Linguistic Variants in Audio-Visual Translation > ### (Subtitles) > ### Aliases: AVT > > ### ** Examples > > ## No test: > data(AVT) > # The execution of corregp may be slow, due to bootstrapping: > avt.crg <- corregp(Variant ~ Speaker * Language * Genre, data = AVT, part = "Variable", b = 3000) > avt.crg Correspondence regression of Variant ~ Speaker * Language * Genre in AVT Conditioning factor(s): Variable Eigenvalues: 253.0671 48.64343 Y (Variant): 1 2 akkoord.gaan -0.281511485 -0.084261507 akkoord.zijn 0.692951349 0.207412940 beginnen.inf 0.701578399 -0.212886974 beginnen.te.inf -0.337797007 0.102501136 bekomen 0.746190148 -0.270901966 beroep.doen.op 1.831937420 0.310849843 een.beroep.doen.op -0.354568533 -0.060164486 een.van.de -0.024059932 0.205609216 één.van.de 0.017097647 -0.146111543 geraken 0.677874742 -0.012996888 op.het.eerste.gezicht 0.039232678 -0.092134788 op.het.eerste.zicht -0.251089142 0.589662644 proberen.inf 2.198499414 0.587377714 proberen.te.inf -0.018790593 -0.005020322 pv.inf.vd -0.047955044 0.025702831 pv.vd.inf 1.221162801 0.064998596 raken -0.167047704 0.003202805 te.veel -0.009299944 0.010609050 ten(minste)_fout -0.096733737 -0.040001409 ten(minste)_goed 0.016122289 0.006666901 teveel 0.143484845 -0.163682480 van.zodra 2.066796480 0.218739625 vd.pv.inf -0.380975024 -0.033008505 verkrijgen -0.497460099 0.180601311 zodra -0.082671859 -0.008749585 zo.n.mv 0.763824511 0.159655925 zulke.mv -0.048849242 -0.010210553 X: Speaker: 1 2 actor 0.5697727 0.10676523 voiceover -0.1033541 -0.01936672 Language: 1 2 inter summary(avt.crg, parm = "b", add_ci = TRUE) Summary of correspondence regression of Variant ~ Speaker * Language * Genre in AVT Conditioning factor(s): Variable Chi-squared: 325.5725 Phi-squared: 0.09859858 N: 3302 Eigenvalues: Value: 1 2 3 4 5 6 TOTAL 253.0671 48.64343 13.7915787 5.88275556 3.794710 0.3929870 325.5725 lower 169.4349 22.94287 -0.3098987 -0.01445832 -4.660463 -0.4712605 upper 326.8344 75.02739 28.8407819 12.20100480 14.398136 1.2942118 Percentage (%): 1 2 3 4 5 6 0.7772986 0.14940889 0.0423610029 0.0180689557 0.01165550 0.001207064 lower 0.6693857 0.07376826 -0.0007928227 -0.0003008701 -0.01406383 -0.001548993 upper 0.8651421 0.23182535 0.0897216655 0.0384501898 0.04425882 0.004154138 TOTAL 1 lower upper Cumulative percentage (cum_%): 1 2 3 4 5 6 TOTAL 0.7772986 0.9267075 0.9690685 0.9871374 0.9987929 1.0000000 1 lower 0.5569857 0.5456412 0.5490921 0.5449009 0.5515074 0.5564915 upper 1.3564366 1.3645978 1.3694212 1.3546426 1.3684411 1.3650396 Contributions: Y (Variant): Points to axes (Absolute contributions): 1 2 3 4 akkoord.gaan 1.002090e-02 4.670724e-03 1.441952e-02 2.394680e-02 akkoord.zijn 2.466682e-02 1.149717e-02 3.549420e-02 5.894596e-02 beginnen.inf 5.056967e-02 2.422408e-02 1.875936e-02 1.861722e-01 beginnen.te.inf 2.434836e-02 1.166345e-02 9.032284e-03 8.963845e-02 bekomen 2.640247e-02 1.810429e-02 1.562749e-03 1.044392e-02 beroep.doen.op 7.956772e-02 1.191869e-02 2.508585e-02 3.274857e-02 een.beroep.doen.op 1.540020e-02 2.306842e-03 4.855325e-03 6.338433e-03 een.van.de 1.269539e-03 4.823408e-01 5.668697e-03 4.326780e-02 één.van.de 9.021694e-04 3.427646e-01 4.028331e-03 3.074729e-02 geraken 2.505777e-01 4.792186e-04 2.706106e-01 1.929999e-02 op.het.eerste.gezicht 1.946302e-04 5.584356e-03 1.284454e-02 1.275925e-02 op.het.eerste.zicht 1.245633e-03 3.573988e-02 8.220509e-02 8.165919e-02 proberen.inf 1.909928e-02 7.092686e-03 5.247355e-03 8.182316e-04 proberen.te.inf 1.632417e-04 6.062125e-05 4.484918e-05 6.993432e-06 pv.inf.vd 3.725777e-04 5.568287e-04 1.593416e-01 5.682289e-02 pv.vd.inf 1.767798e-01 2.605584e-03 4.912804e-02 4.801391e-02 raken 6.174950e-02 1.180932e-04 6.668617e-02 4.756068e-03 te.veel 7.382080e-05 4.997842e-04 9.080052e-04 1.030341e-02 ten(minste)_fout 5.916165e-04 5.263158e-04 2.681366e-04 1.958870e-04 ten(minste)_goed 9.860275e-05 8.771929e-05 4.468944e-05 3.264783e-05 teveel 1.138950e-03 7.710956e-03 1.400922e-02 1.589669e-01 van.zodra 1.519156e-01 8.852649e-03 7.256168e-03 1.006553e-02 vd.pv.inf 5.219138e-02 2.038304e-03 1.561852e-01 1.169116e-03 verkrijgen 1.760165e-02 1.206952e-02 1.041833e-03 6.962611e-03 zodra 6.076623e-03 3.541060e-04 2.902467e-04 4.026213e-04 zo.n.mv 2.535971e-02 5.764194e-03 5.167704e-02 9.917294e-02 zulke.mv 1.621842e-03 3.686403e-04 3.304927e-03 6.342455e-03 TOTAL 1.000000e+00 1.000000e+00 1.000000e+00 1.000000e+00 5 6 akkoord.gaan 1.647379e-03 6.655572e-02 akkoord.zijn 4.055087e-03 1.638295e-01 beginnen.inf 4.061758e-02 1.406775e-03 beginnen.te.inf 1.955661e-02 6.773363e-04 bekomen 1.247850e-02 2.197878e-02 beroep.doen.op 5.987625e-03 2.455476e-02 een.beroep.doen.op 1.158895e-03 4.752534e-03 een.van.de 3.410439e-03 2.191415e-03 één.van.de 2.423551e-03 1.557280e-03 geraken 3.827572e-04 2.609421e-01 op.het.eerste.gezicht 4.204116e-03 9.817787e-03 op.het.eerste.zicht 2.690634e-02 6.283384e-02 proberen.inf 1.401126e-03 4.146843e-03 proberen.te.inf 1.197544e-05 3.544310e-05 pv.inf.vd 2.085275e-01 1.437099e-01 pv.vd.inf 8.778974e-02 1.846010e-02 raken 9.432232e-05 6.430358e-02 te.veel 1.122614e-02 2.012093e-03 ten(minste)_fout 5.973832e-06 9.779912e-05 ten(minste)_goed 9.956387e-07 1.629985e-05 teveel 1.732034e-01 3.104372e-02 van.zodra 3.681843e-02 6.580844e-02 vd.pv.inf 1.860313e-02 3.113314e-02 verkrijgen 8.319000e-03 1.465252e-02 zodra 1.472737e-03 2.632338e-03 zo.n.mv 3.098788e-01 7.989213e-04 zulke.mv 1.981783e-02 5.109381e-05 TOTAL 1.000000e+00 1.000000e+00 Axes to points (Squared correlations): 1 2 3 4 akkoord.gaan 0.80883913 0.0724650110 0.063428532 0.0449312187 akkoord.zijn 0.80883913 0.0724650110 0.063428532 0.0449312187 beginnen.inf 0.82647431 0.0760983287 0.016708427 0.0707292615 beginnen.te.inf 0.82647431 0.0760983287 0.016708427 0.0707292615 bekomen 0.86760095 0.1143524066 0.002798613 0.0079778142 beroep.doen.op 0.94593994 0.0272360171 0.016253009 0.0090503252 een.beroep.doen.op 0.94593994 0.0272360171 0.016253009 0.0090503252 een.van.de 0.01331421 0.9723256669 0.003239894 0.0105482220 één.van.de 0.01331421 0.9723256669 0.003239894 0.0105482220 geraken 0.94104121 0.0003459302 0.055384643 0.0016848780 op.het.eerste.gezicht 0.08307184 0.4581473867 0.298772522 0.1265942163 op.het.eerste.zicht 0.08307184 0.4581473867 0.298772522 0.1265942163 proberen.inf 0.91845350 0.0655600677 0.013751778 0.0009146638 proberen.te.inf 0.91845350 0.0655600677 0.013751778 0.0009146638 pv.inf.vd 0.02693150 0.0077366656 0.627698845 0.0954799443 pv.vd.inf 0.96908557 0.0027455095 0.014676996 0.0061184531 raken 0.94104121 0.0003459302 0.055384643 0.0016848780 te.veel 0.11711231 0.1524034801 0.078503764 0.3799705503 ten(minste)_fout 0.83069988 0.1420491994 0.020518159 0.0063937348 ten(minste)_goed 0.83069988 0.1420491994 0.020518159 0.0063937348 teveel 0.11711231 0.1524034801 0.078503764 0.3799705503 van.zodra 0.98072752 0.0109851973 0.002552888 0.0015105254 vd.pv.inf 0.84933933 0.0063758770 0.138516217 0.0004422678 verkrijgen 0.86760095 0.1143524066 0.002798613 0.0079778142 zodra 0.98072752 0.0109851973 0.002552888 0.0015105254 zo.n.mv 0.69982621 0.0305754674 0.077718066 0.0636186293 zulke.mv 0.69982621 0.0305754674 0.077718066 0.0636186293 5 6 TOTAL akkoord.gaan 1.993848e-03 8.342256e-03 1 akkoord.zijn 1.993848e-03 8.342256e-03 1 beginnen.inf 9.953966e-03 3.570315e-05 1 beginnen.te.inf 9.953966e-03 3.570315e-05 1 bekomen 6.148663e-03 1.121558e-03 1 beroep.doen.op 1.067393e-03 4.533199e-04 1 een.beroep.doen.op 1.067393e-03 4.533199e-04 1 een.van.de 5.363181e-04 3.568917e-05 1 één.van.de 5.363181e-04 3.568917e-05 1 geraken 2.155424e-05 1.521784e-03 1 op.het.eerste.gezicht 2.690675e-02 6.507283e-03 1 op.het.eerste.zicht 2.690675e-02 6.507283e-03 1 proberen.inf 1.010323e-03 3.096708e-04 1 proberen.te.inf 1.010323e-03 3.096708e-04 1 pv.inf.vd 2.260216e-01 1.613143e-02 1 pv.vd.inf 7.216325e-03 1.571470e-04 1 raken 2.155424e-05 1.521784e-03 1 te.veel 2.670529e-01 4.956948e-03 1 ten(minste)_fout 1.257766e-04 2.132462e-04 1 ten(minste)_goed 1.257766e-04 2.132462e-04 1 teveel 2.670529e-01 4.956948e-03 1 van.zodra 3.564135e-03 6.597360e-04 1 vd.pv.inf 4.539537e-03 7.867703e-04 1 verkrijgen 6.148663e-03 1.121558e-03 1 zodra 3.564135e-03 6.597360e-04 1 zo.n.mv 1.282274e-01 3.423675e-05 1 zulke.mv 1.282274e-01 3.423675e-05 1 X: Points to axes (Absolute contributions): Speaker: 1 2 3 4 5 actor 0.6503926 0.11880740 0.0016540431 0.034683308 0.038842235 voiceover 0.1179782 0.02155111 0.0003000357 0.006291391 0.007045801 TOTAL 0.7683708 0.14035850 0.0019540788 0.040974698 0.045888036 6 actor 0.0020771476 voiceover 0.0003767849 TOTAL 0.0024539325 Language: 1 2 3 4 5 inter screeplot(avt.crg, add_ci = TRUE) > anova(avt.crg, nf = 2) Error in c.ssq[[p7]] * c.rel[[p7]] : non-conformable arrays Calls: anova -> anova.corregp -> do.call -> lapply -> FUN -> apply Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [11s/11s] OK * checking PDF version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * checking for new files in some other directories ... OK * DONE Status: 1 ERROR, 1 NOTE See ‘/data/blackswan/ripley/R/packages/tests-devel/corregp.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 0:55.66, 48.00 + 8.12