* using log directory ‘/data/localhost/ripley/R/packages/tests-donttest/clim4health.Rcheck’
* using R Under development (unstable) (2026-08-24 r90445)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 16.1.1 20260515 (Red Hat 16.1.1-2)
    GNU Fortran (GCC) 16.1.1 20260515 (Red Hat 16.1.1-2)
* running under: Fedora Linux 44 (Server Edition)
* using session charset: UTF-8
* current time: 2026-08-25 00:07:50 UTC
* checking for file ‘clim4health/DESCRIPTION’ ... OK
* this is package ‘clim4health’ version ‘0.1.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘clim4health’ can be installed ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [10s/10s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [15s/16s] OK
* checking examples with --run-donttest ... [23s/24s] ERROR
Running examples in ‘clim4health-Ex.R’ failed
The error most likely occurred in:

> ### Name: c4h_downscale
> ### Title: c4h_downscale
> ### Aliases: c4h_downscale
> 
> ### ** Examples
> 
> ## No test: 
> # DISCLAIMER: The purpose of these examples is to show the functionality
> # of the different functions. To perform downscaling and calibration, a
> # much larger time series is required.
> hcst <- c4h_load(system.file("extdata", "hindcast", package = "clim4health"),
+                  variable = "t2m",
+                  year = 2010:2012,
+                  month = 1,
+                  leadtime_month = 1:3,
+                  ext = "nc")
Variables found in 'path' are: 't2m'. Requested variables are: 't2m'.
Warning in CPL_get_metadata(file, NA_character_, options) :
  GDAL Message 1: dimension #2 (forecastMonth) is not a Vertical dimension.
Warning in CPL_get_metadata(file, domain_item, options) :
  GDAL Message 1: dimension #2 (forecastMonth) is not a Vertical dimension.
Warning in CPL_read_gdal(as.character(x), as.character(options), as.character(driver),  :
  GDAL Message 1: dimension #2 (forecastMonth) is not a Vertical dimension.
Warning in CPL_read_gdal(as.character(x), as.character(options), as.character(driver),  :
  GDAL Message 1: dimension #2 (forecastMonth) is not a Vertical dimension.
Warning in CPL_read_gdal(as.character(x), as.character(options), as.character(driver),  :
  GDAL Message 1: dimension #2 (forecastMonth) is not a Vertical dimension.
Warning in CPL_read_gdal(as.character(x), as.character(options), as.character(driver),  :
  GDAL Message 1: dimension #2 (forecastMonth) is not a Vertical dimension.
Warning in CPL_get_metadata(file, NA_character_, options) :
  GDAL Message 1: dimension #2 (forecastMonth) is not a Vertical dimension.
Warning in CPL_get_metadata(file, domain_item, options) :
  GDAL Message 1: dimension #2 (forecastMonth) is not a Vertical dimension.
Warning in CPL_read_gdal(as.character(x), as.character(options), as.character(driver),  :
  GDAL Message 1: dimension #2 (forecastMonth) is not a Vertical dimension.
Warning in CPL_get_metadata(file, NA_character_, options) :
  GDAL Message 1: dimension #2 (forecastMonth) is not a Vertical dimension.
Warning in CPL_get_metadata(file, domain_item, options) :
  GDAL Message 1: dimension #2 (forecastMonth) is not a Vertical dimension.
Warning in CPL_read_gdal(as.character(x), as.character(options), as.character(driver),  :
  GDAL Message 1: dimension #2 (forecastMonth) is not a Vertical dimension.
Warning in CPL_get_metadata(file, NA_character_, options) :
  GDAL Message 1: dimension #2 (forecastMonth) is not a Vertical dimension.
Warning in CPL_get_metadata(file, domain_item, options) :
  GDAL Message 1: dimension #2 (forecastMonth) is not a Vertical dimension.
Warning in CPL_read_gdal(as.character(x), as.character(options), as.character(driver),  :
  GDAL Message 1: dimension #2 (forecastMonth) is not a Vertical dimension.
> lats <- hcst$coords$latitude
> lons <- hcst$coords$longitude
> obs <- c4h_load(system.file("extdata", "reanalysis",
+                 package = "clim4health"),
+                 variable = "t2m",
+                 year = 2010:2012,
+                 month = 1,
+                 leadtime_month = 1:3,
+                 bbox = c(max(lats), min(lons),
+                          min(lats), max(lons)),
+                 ext = "nc")
Variables found in 'path' are: 't2m'. Requested variables are: 't2m'.
> ### Example with gridded data
> dwn <- c4h_downscale("Interpolation", exp = hcst,
+                      method_remap = "bilinear",
+                      target_grid = system.file("extdata",
+                                                "reanalysis/t2m_201001.nc",
+                                                package = "clim4health"))
Error in .cdo_check() : 
  CDO command line operators not found. Please install CDO to use this function. Instructions can be found in the clim4health installation tutorials.
Calls: c4h_downscale -> .cdo_check
Execution halted
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’ [61s/63s]
 [61s/63s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [14s/18s] OK
* checking PDF version of manual ... OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* checking for new files in some other directories ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/localhost/ripley/R/packages/tests-donttest/clim4health.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 3:25.41, 161.37 + 27.42