* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/bpgmm.Rcheck’
* using R Under development (unstable) (2024-03-16 r86144)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 13.2.1 20231011 (Red Hat 13.2.1-4)
    GNU Fortran (GCC) 13.2.1 20231011 (Red Hat 13.2.1-4)
* running under: Fedora Linux 38 (Workstation Edition)
* using session charset: UTF-8
* checking for file ‘bpgmm/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘bpgmm’ version ‘1.0.9’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘bpgmm’ can be installed ... [126s/60s] OK
* used C++ compiler: ‘g++ (GCC) 13.2.1 20231011 (Red Hat 13.2.1-4)’
* checking C++ specification ... NOTE
  Specified C++11: please drop specification unless essential
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [16s/17s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... OK
* checking examples with --run-donttest ... ERROR
Running examples in ‘bpgmm-Ex.R’ failed
The error most likely occurred in:

> ### Name: EvaluateProposalPsy
> ### Title: EvaluateProposalPsy
> ### Aliases: EvaluateProposalPsy
> 
> ### ** Examples
> 
> set.seed(100)
> n <- 10
> p <- 2
> q <- 1
> K <- 2
> m <- 1
> muBar <- c(0, 0)
> qVec <- c(1, 1)
> constraint <- c(0, 0, 0)
> X <- t(
+   fabMix::simData(
+     sameLambda = TRUE,
+     sameSigma = TRUE,
+     K.true = K,
+     n = n,
+     q = q,
+     p = p,
+     sINV_values = 1 / ((1:p))
+   )$data
+ )
Simulation parameters: 
   n = 10 
   p = 2 
   q = 1 
   K = 2 
> hparam <- new(
+   "Hparam",
+   alpha1 = 0.567755037123148,
+   alpha2 = 1.1870201935945,
+   delta = 2,
+   ggamma = 2,
+   bbeta = 3.39466184520673
+ )
> ZOneDim <- sample(seq_len(m), n, replace = TRUE)
> thetaYList <-
+   new(
+     "ThetaYList",
+     tao = 0.366618687752634,
+     psy = list(structure(
+       c(
+         4.18375613018654,
+         0, 0, 5.46215996830771
+       ),
+       .Dim = c(2L, 2L)
+     )),
+     M = list(structure(
+       c(
+         3.27412045866392,
+         -2.40544145363349
+       ),
+       .Dim = 1:2
+     )),
+     lambda = list(structure(
+       c(
+         2.51015961514781,
+         -0.0741189919182549
+       ),
+       .Dim = 2:1
+     )),
+     Y = list(structure(
+       c(
+         -0.244239011725104,
+         -0.26876172736886,
+         0.193431511203083,
+         0.41624466812811,
+         -0.54581548068437,
+         -0.0479517628308146,
+         -0.633383997203325,
+         0.856855296613208,
+         0.792850576988512,
+         0.268208848994559
+       ),
+       .Dim = c(1L, 10L)
+     ))
+   )
> constraint <- c(0, 0, 0)
> CxyList <-
+   list(
+     A = list(structure(
+       c(0.567755037123148, 0, 0, 1.1870201935945),
+       .Dim = c(2L, 2L)
+     )),
+     nVec = structure(10, .Dim = c(1L, 1L)),
+     Cxxk = list(structure(
+       c(
+         739.129405647622,
+         671.040583460732,
+         671.040583460732,
+         618.754338945564
+       ),
+       .Dim = c(2L, 2L)
+     )),
+     Cxyk = list(structure(
+       c(-18.5170828875512, -16.5748393456787),
+       .Dim = 2:1
+     )),
+     Cyyk = list(structure(2.4786991560888, .Dim = c(
+       1L,
+       1L
+     ))),
+     Cytytk = list(structure(
+       c(
+         10, 0.787438922114998, 0.787438922114998,
+         2.4786991560888
+       ),
+       .Dim = c(2L, 2L)
+     )),
+     Cxtytk = list(structure(
+       c(
+         -57.5402230447872,
+         -54.6677145995824,
+         -18.5170828875512,
+         -16.5748393456787
+       ),
+       .Dim = c(
+         2L,
+         2L
+       )
+     )),
+     CxL1k = list(structure(
+       c(-59.5168204264758, -54.6093504204781),
+       .Dim = 2:1
+     )),
+     Cxmyk = list(structure(
+       c(
+         -21.0952527723962,
+         -14.6807011202188
+       ),
+       .Dim = 2:1
+     )),
+     sumCxmyk = structure(c(
+       -21.0952527723962,
+       -14.6807011202188
+     ), .Dim = 2:1),
+     sumCyyk = structure(3.6657193496833, .Dim = c(
+       1L,
+       1L
+     ))
+   )
> ## No test: 
> EvaluateProposalPsy(hparam, thetaYList, CxyList, constraint, thetaYList@psy, m, p, qVec, delta)
Error in EvaluateProposalPsy(hparam, thetaYList, CxyList, constraint,  : 
  could not find function "EvaluateProposalPsy"
Execution halted
* checking PDF version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* checking for new files in some other directories ... OK
* DONE

Status: 1 ERROR, 1 NOTE
See
  ‘/data/blackswan/ripley/R/packages/tests-devel/bpgmm.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 2:04.10, 175.76 + 14.56