* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/bhpm.Rcheck’ * using R Under development (unstable) (2025-11-17 r89032) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) * running under: Fedora Linux 40 (Workstation Edition) * using session charset: UTF-8 * checking for file ‘bhpm/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘bhpm’ version ‘1.8.1’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘bhpm’ can be installed ... [47s/50s] OK * used C++ compiler: ‘g++ (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3)’ * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [55s/58s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking examples ... [31s/32s] OK * checking examples with --run-donttest ... [30m/32m] ERROR Running examples in ‘bhpm-Ex.R’ failed The error most likely occurred in: > ### Name: bhpm.pm > ### Title: A Bayesian Hierarchical Model for grouped data and clusters with > ### Point-Mass. > ### Aliases: bhpm.pm > ### Keywords: bhpm.cluster.BB.hier3 Bayesian Hierarchy Point-mass Cluster > ### Adverse event Adverse outcome > > ### ** Examples > > > data(bhpm.cluster.data1) > raw = bhpm.pm(cluster.data = bhpm.cluster.data1, burnin = 100, iter = 200) Memory Model: HIGH MCMC fitting complete. > > ## No test: > data(bhpm.cluster.data1) > raw = bhpm.pm(cluster.data = bhpm.cluster.data1) Memory Model: HIGH 1000 iterations... 2000 iterations... 3000 iterations... 4000 iterations... 5000 iterations... 6000 iterations... 7000 iterations... 8000 iterations... 9000 iterations... 10000 iterations... 11000 iterations... 12000 iterations... 13000 iterations... 14000 iterations... 15000 iterations... 16000 iterations... 17000 iterations... 18000 iterations... 19000 iterations... 20000 iterations... 21000 iterations... 22000 iterations... 23000 iterations... 24000 iterations... 25000 iterations... 26000 iterations... 27000 iterations... 28000 iterations... 29000 iterations... 30000 iterations... 31000 iterations... 32000 iterations... 33000 iterations... 34000 iterations... 35000 iterations... 36000 iterations... * checking PDF version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * checking for new files in some other directories ... OK * DONE Status: 1 ERROR See ‘/data/blackswan/ripley/R/packages/tests-devel/bhpm.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 35:22.52, 1912.74 + 66.68