* using log directory ‘/data/localhost/ripley/R/packages/tests-donttest/SurvivalTests.Rcheck’ * using R Under development (unstable) (2026-08-22 r90441) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 16.1.1 20260515 (Red Hat 16.1.1-2) GNU Fortran (GCC) 16.1.1 20260515 (Red Hat 16.1.1-2) * running under: Fedora Linux 44 (Server Edition) * using session charset: UTF-8 * current time: 2026-08-23 04:27:17 UTC * checking for file ‘SurvivalTests/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘SurvivalTests’ version ‘1.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘SurvivalTests’ can be installed ... [4s/11s] OK * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [7s/18s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... OK * checking examples with --run-donttest ... [28s/75s] ERROR Running examples in ‘SurvivalTests-Ex.R’ failed The error most likely occurred in: > ### Name: Spaircomp > ### Title: Pairwise Comparisons of Survival Tests for One-Way Layout > ### Aliases: Spaircomp Spaircomp.default Spaircomp.survtests > ### Keywords: functions > > ### ** Examples > > > library(survival) > lung$status <- ifelse(lung$status == 2, 1, 0) > lung$age <- arules::discretize(lung$age, breaks = 3, labels = c("Low","Medium","High")) > > library(SurvivalTests) > ## No test: > out = SANOVA(time~age+status, lung, alpha = 0.05) Generalized Test for Survival ANOVA (alpha = 0.05) --------------------------------------------------------------- data : time and age | status = status p.value : 0.3066 Result : Difference is not statistically significant. --------------------------------------------------------------- > > Spaircomp(out, adjust.method = "bonferroni") Error in Spaircomp.survtests(out, adjust.method = "bonferroni") : Pairwise comparisons could not be performed since difference is not statistically significant (alpha = 0.05). Calls: Spaircomp -> Spaircomp.survtests Execution halted * checking PDF version of manual ... OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * checking for new files in some other directories ... OK * DONE Status: 1 ERROR See ‘/data/localhost/ripley/R/packages/tests-donttest/SurvivalTests.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 3:29.24, 71.01 + 12.22