* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/SPQR.Rcheck’
* using R Under development (unstable) (2023-08-12 r84939)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (GCC) 13.2.1 20230728 (Red Hat 13.2.1-1)
    GNU Fortran (GCC) 13.2.1 20230728 (Red Hat 13.2.1-1)
* running under: Fedora Linux 38 (Workstation Edition)
* using session charset: UTF-8
* checking for file ‘SPQR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘SPQR’ version ‘0.1.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘SPQR’ can be installed ... [57s/58s] OK
* used C++ compiler: ‘g++ (GCC) 13.2.1 20230728 (Red Hat 13.2.1-1)’
* checking C++ specification ... NOTE
  Specified C++11: please drop specification unless essential
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... NOTE
Namespaces in Imports field not imported from:
  ‘Rcpp’ ‘progress’
  All declared Imports should be used.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [21s/21s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... OK
* checking examples with --run-donttest ... [45s/25s] ERROR
Running examples in ‘SPQR-Ex.R’ failed
The error most likely occurred in:

> ### Name: cv.SPQR
> ### Title: cross-validation for SPQR estimator
> ### Aliases: cv.SPQR
> 
> ### ** Examples
> 
> ## No test: 
> set.seed(919)
> n <- 200
> X <- rbinom(n, 1, 0.5)
> Y <- rnorm(n, X, 0.8)
> folds <- createFolds.SPQR(Y, nfold = 5)
> ## compute 5-fold CV error
> cv.out <- cv.SPQR(folds=folds, X=X, Y=Y, method="MLE",
+                   normalize = TRUE, verbose = FALSE)
Error in cpp_cuda_is_available() : 
  Lantern is not loaded. Please use `install_torch()` to install additional dependencies.
Calls: cv.SPQR ... cv.SPQR.ADAM -> <Anonymous> -> cpp_cuda_is_available
Execution halted
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking PDF version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* checking for new files in some other directories ... OK
* DONE

Status: 1 ERROR, 2 NOTEs
See
  ‘/data/blackswan/ripley/R/packages/tests-devel/SPQR.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 2:49.14, 171.94 + 15.97