* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/RARtrials.Rcheck’ * using R Under development (unstable) (2025-11-16 r89026) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) * running under: Fedora Linux 40 (Workstation Edition) * using session charset: UTF-8 * checking for file ‘RARtrials/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘RARtrials’ version ‘0.0.2’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘RARtrials’ can be installed ... [20s/23s] OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [49s/59s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under ‘inst/doc’ ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [36s/46s] OK * checking examples with --run-donttest ... [30m/34m] ERROR Running examples in ‘RARtrials-Ex.R’ failed The error most likely occurred in: > ### Name: flgi_cut_off_binary > ### Title: Cut-off Value of the Forward-looking Gittins Index Rule in > ### Binary Endpoint > ### Aliases: flgi_cut_off_binary > > ### ** Examples > > #The forward-looking Gittins Index rule with delayed responses follow a normal distribution > #with a mean of 60 days and a standard deviation of 3 days > #One can run the following command 20000 times to obtain the selected cut-off value around 1.9991 > #with an upper one-sided type I error 0.025 > ## No test: > stopbound1<-lapply(1:20000,function(x){ flgi_cut_off_binary(Gittinstype='Binary',df=0.5,Pats=10, + nMax=50000,TimeToOutcome=expression(rnorm( length( vStartTime ),60, 3)), + enrollrate=0.9,I0= matrix(1,nrow=2,ncol=2),K=2,Tsize=992,ptrue=c(0.6,0.6),block=20, + rule='FLGI PM',ztype='unpooled')}) * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [44s/52s] OK * checking PDF version of manual ... [9s/13s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * checking for new files in some other directories ... OK * DONE Status: 1 ERROR See ‘/data/blackswan/ripley/R/packages/tests-devel/RARtrials.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 38:28.10, 1939.86 + 50.22