* using log directory ‘/data/localhost/ripley/R/packages/tests-donttest/OpenRange.Rcheck’ * using R Under development (unstable) (2026-07-23 r90290) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 16.1.1 20260515 (Red Hat 16.1.1-2) GNU Fortran (GCC) 16.1.1 20260515 (Red Hat 16.1.1-2) * running under: Fedora Linux 44 (Server Edition) * using session charset: UTF-8 * current time: 2026-07-23 10:27:47 UTC * checking for file ‘OpenRange/DESCRIPTION’ ... OK * this is package ‘OpenRange’ version ‘0.0.1’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘OpenRange’ can be installed ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... NOTE Missing dependency on R >= 4.1.0 because package code uses the pipe |> or function shorthand \(...) syntax added in R 4.1.0. File(s) using such syntax: ‘OpenRange_api_load_species.Rd’ ‘OpenRange_api_species.Rd’ ‘OpenRange_load_species.Rd’ ‘OpenRange_sf.R’ ‘OpenRange_species.Rd’ * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking examples with --run-donttest ... [4s/144s] ERROR Running examples in ‘OpenRange-Ex.R’ failed The error most likely occurred in: > ### Name: OpenRange_get_license > ### Title: Download license information > ### Aliases: OpenRange_get_license > > ### ** Examples > > ## No test: > > range_license_info <- OpenRange_get_license() Error in postgresqlNewConnection(drv, ...) : RPosgreSQL error: could not connect public_bien@vegbiendev.nceas.ucsb.edu:5432 on dbname "vegbien": connection to server at "vegbiendev.nceas.ucsb.edu" (128.111.85.31), port 5432 failed: Connection timed out Is the server running on that host and accepting TCP/IP connections? Calls: OpenRange_get_license ... -> -> postgresqlNewConnection Execution halted * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [8s/146s] ERROR Error(s) in re-building vignettes: --- re-building ‘OpenRange.rmd’ using rmarkdown Quitting from OpenRange.rmd:22-31 [load species] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `postgresqlNewConnection()`: ! RPosgreSQL error: could not connect public_bien@vegbiendev.nceas.ucsb.edu:5432 on dbname "vegbien": connection to server at "vegbiendev.nceas.ucsb.edu" (128.111.85.31), port 5432 failed: Connection timed out Is the server running on that host and accepting TCP/IP connections? --- Backtrace: ▆ 1. └─OpenRange::OpenRange_load_species(species = "Pinus contorta") 2. └─OpenRange:::ranges_sql(query) 3. ├─DBI::dbConnect(...) 4. └─DBI::dbConnect(...) 5. └─RPostgreSQL::postgresqlNewConnection(drv, ...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'OpenRange.rmd' failed with diagnostics: RPosgreSQL error: could not connect public_bien@vegbiendev.nceas.ucsb.edu:5432 on dbname "vegbien": connection to server at "vegbiendev.nceas.ucsb.edu" (128.111.85.31), port 5432 failed: Connection timed out Is the server running on that host and accepting TCP/IP connections? --- failed re-building ‘OpenRange.rmd’ SUMMARY: processing the following file failed: ‘OpenRange.rmd’ Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * checking for new files in some other directories ... OK * DONE Status: 2 ERRORs, 1 NOTE See ‘/data/localhost/ripley/R/packages/tests-donttest/OpenRange.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 6:08.26, 48.18 + 7.80