* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/MedSurvey.Rcheck’
* using R Under development (unstable) (2023-03-24 r84037)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
    gcc (GCC) 11.3.1 20220421 (Red Hat 11.3.1-2)
    GNU Fortran (GCC) 11.3.1 20220421 (Red Hat 11.3.1-2)
* running under: Fedora 34 (Workstation Edition)
* using session charset: UTF-8
* checking for file ‘MedSurvey/DESCRIPTION’ ... OK
* this is package ‘MedSurvey’ version ‘1.1.1.3.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘MedSurvey’ can be installed ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking examples with --run-donttest ... [26s/18s] ERROR
Running examples in ‘MedSurvey-Ex.R’ failed
The error most likely occurred in:

> ### Name: med.p.adjust
> ### Title: To adjust the p values for multimediation tests
> ### Aliases: med.p.adjust
> 
> ### ** Examples
> 
> ## Don't show: 
>  #Toy example for check:
> R <- 20
> wgtnames <- paste("repwgt", seq(0,R,by=1), sep="")
> mwgtname=wgtnames[1]
> repwgtnames=wgtnames[2:(R+1)]
> model2 <- ' # outcome
+               numcg ~ u0*1 + c*workban + b1*sp_adltban + b2*sp_kidsban
+             # mediator
+               sp_adltban ~ u1*1 + a1*workban
+               sp_kidsban ~ u2*1 + a2*workban
+             #covariance of residuals
+               sp_adltban ~~ sp_kidsban
+             # indirect effect (a*b)
+               a1b1 := a1*b1
+               a2b2 := a2*b2
+             # total effect
+               total := c + (a1*b1) + (a2*b2)
+            '
> fit.BRR2 <- med.fit.BRR(model=model2, data=MedData, mwgtname=mwgtname,
+              repwgtnames=repwgtnames)
> med.p.adjust(fit=fit.BRR2, med.eff=c('a1b1' , 'a2b2'))
	Adjustment for multi mediation tests:

         Effect          p Value      adj.p Value 
           a1b1      0.004699562      0.009399125 
           a2b2      0.251050312      0.251050312 

	NOTE: 	 p Value adjustment method is holm

> ## End(Don't show)
> ## No test: 
> R <- 160
> wgtnames <- paste("repwgt", seq(0,R,by=1), sep="")
> mwgtname=wgtnames[1]
> repwgtnames=wgtnames[2:(R+1)]
> fayfactor=0.5
> 
> model2 <- ' # outcome
+               numcg ~ u0*1 + c*workban + b1*sp_adltban + b2*sp_kidsban
+             # mediator
+               sp_adltban ~ u1*1 + a1*workban
+               sp_kidsban ~ u2*1 + a2*workban
+             #covariance of residuals
+               sp_adltban ~~ sp_kidsban
+             # indirect effect (a*b)
+               a1b1 := a1*b1
+               a2b2 := a2*b2
+             # total effect
+               total := c + (a1*b1) + (a2*b2)
+            '
> fit.BRR2 <- med.fit.BRR(model=model2, data=MedData, mwgtname=mwgtname,
+              repwgtnames=repwgtnames, fayfactor, parallel='parallel', ncore=4)
Error in .check_ncores(cores) : 4 simultaneous processes spawned
Calls: med.fit.BRR -> mclapply -> .check_ncores
Execution halted
* checking PDF version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* checking for new files in some other directories ... OK
* DONE

Status: 1 ERROR
See
  ‘/data/blackswan/ripley/R/packages/tests-devel/MedSurvey.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 1:20.98, 79.28 + 8.82