* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/FCO.Rcheck’ * using R Under development (unstable) (2026-02-13 r89414) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) GNU Fortran (GCC) 14.2.1 20240912 (Red Hat 14.2.1-3) * running under: Fedora Linux 40 (Workstation Edition) * using session charset: UTF-8 * current time: 2026-02-13 22:17:59 UTC * checking for file ‘FCO/DESCRIPTION’ ... OK * this is package ‘FCO’ version ‘2.0.1’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘FCO’ can be installed ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [10s/10s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking examples with --run-donttest ... [19s/42s] ERROR Running examples in ‘FCO-Ex.R’ failed The error most likely occurred in: > ### Name: flex_co2 > ### Title: Obtain cutoffs for fit indices simulated by gen_fit2. > ### Aliases: flex_co2 > > ### ** Examples > > ## No test: > #Simple example > library(lavaan) This is lavaan 0.6-21 lavaan is FREE software! Please report any bugs. > library(dplyr) Attaching package: ‘dplyr’ The following objects are masked from ‘package:stats’: filter, lag The following objects are masked from ‘package:base’: intersect, setdiff, setequal, union > HS.model <- ' visual =~ x1 + x2 + x3 + textual =~ x4 + x5 + x6 + speed =~ x7 + x8 + x9 ' > > fit <- cfa( + HS.model, + data = HolzingerSwineford1939 + ) > #Note: Demonstration only! Please use higher numbers of replications for your applications (>= 500). > fits <- gen_fit2(fit = fit, rep = 100) Warning in pop_mod(mod = mod, x = x, type = type, standardized = standardized, : At least one loading is > 1. Consider revision of standardized. Warning in checker(pop.mod = cpop, cfa = cfa, x = x, esti = esti, sm = sm, : Skewness (80.5) or Kurtosis (987.3) are very high. Consider changing estimator and/or arguments sk and ku. > #Default evaluation: > flex_co2(fits) Warning: The `x` argument of `as_tibble.matrix()` must have unique column names if `.name_repair` is omitted as of tibble 2.0.0. ℹ Using compatibility `.name_repair`. ℹ The deprecated feature was likely used in the FCO package. Please report the issue to the authors. Error in `dplyr::if_else()`: ! `condition` must be a logical vector, not a logical matrix. Backtrace: ▆ 1. ├─FCO::flex_co2(fits) 2. │ └─FCO:::get_co(co, tab, ind = i, correct.fits = cf, miss.fits = mf) 3. │ └─FCO:::get_FCO2(co[i, ], tab, ind) 4. │ └─dplyr::if_else(...) 5. │ └─vctrs::vec_if_else(...) 6. └─rlang::abort(message = message, call = call) Execution halted * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘testthat.R’ [115s/65s] [115s/66s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * checking for new files in some other directories ... OK * DONE Status: 1 ERROR See ‘/data/blackswan/ripley/R/packages/tests-devel/FCO.Rcheck/00check.log’ for details. Command exited with non-zero status 1 Time 2:53.76, 179.29 + 25.28