* using log directory ‘/data/blackswan/ripley/R/packages/tests-devel/DealGPL570.Rcheck’
* using R Under development (unstable) (2021-03-29 r80130)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* checking for file ‘DealGPL570/DESCRIPTION’ ... OK
* this is package ‘DealGPL570’ version ‘0.2.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘DealGPL570’ can be installed ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking LazyData ... NOTE
  'LazyData' is specified without a 'data' directory
* checking R/sysdata.rda ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking examples with --run-donttest ... ERROR
Running examples in ‘DealGPL570-Ex.R’ failed
The error most likely occurred in:

> ### Name: DealGPL570
> ### Title: Dealing GPL570 (Affymetrix Human Genome U133 Plus 2.0 Array)
> ###   RAW.tar file using the robust multi-array average expression measure
> ### Aliases: DealGPL570
> 
> ### ** Examples
> 
> 
> # You can put your own `GSE*_RAW.tar` under the working directory,
> # now we download one online and have a test.
> # Next step would run for about 30s, so you can try it yourself or view the vignettes
> ## No test: 
> GEOquery::getGEOSuppFiles("GSE104683", makeDirectory = FALSE, baseDir = tempdir())
trying URL 'https://ftp.ncbi.nlm.nih.gov/geo/series/GSE104nnn/GSE104683/suppl//GSE104683_RAW.tar?tool=geoquery'
Warning in download.file(paste(file.path(url, i), "tool=geoquery", sep = "?"),  :
  URL 'https://ftp.ncbi.nlm.nih.gov/geo/series/GSE104nnn/GSE104683/suppl//GSE104683_RAW.tar?tool=geoquery': status was 'Server returned nothing (no headers, no data)'
Error in download.file(paste(file.path(url, i), "tool=geoquery", sep = "?"),  : 
  cannot open URL 'https://ftp.ncbi.nlm.nih.gov/geo/series/GSE104nnn/GSE104683/suppl//GSE104683_RAW.tar?tool=geoquery'
Calls: <Anonymous> -> download.file
Execution halted
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘spelling.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 1 ERROR, 1 NOTE
See
  ‘/data/blackswan/ripley/R/packages/tests-devel/DealGPL570.Rcheck/00check.log’
for details.

Command exited with non-zero status 1
Time 0:50.61, 43.19 + 4.89